Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13120 and A4249_RS13125 are separated by 64 nucleotides A4249_RS13125 and A4249_RS13130 are separated by 66 nucleotides A4249_RS13130 and A4249_RS13135 are separated by 44 nucleotides A4249_RS13135 and A4249_RS13140 are separated by 24 nucleotides
A4249_RS13120: A4249_RS13120 - hypothetical protein, at 2,639,784 to 2,640,245
_RS13120
A4249_RS13125: A4249_RS13125 - ribonuclease PH, at 2,640,310 to 2,641,035
_RS13125
A4249_RS13130: A4249_RS13130 - heat-inducible transcriptional repressor HrcA, at 2,641,102 to 2,642,196
_RS13130
A4249_RS13135: A4249_RS13135 - nucleotide exchange factor GrpE, at 2,642,241 to 2,642,828
_RS13135
A4249_RS13140: A4249_RS13140 - S8 family peptidase, at 2,642,853 to 2,644,895
_RS13140
Position (kb)
2641
2642
2643 Strain fitness (log2 ratio)
-2
-1
0
1 at 2640.311 kb on + strand at 2640.507 kb on - strand, within A4249_RS13125 at 2640.608 kb on + strand, within A4249_RS13125 at 2640.608 kb on + strand, within A4249_RS13125 at 2640.608 kb on + strand, within A4249_RS13125 at 2640.609 kb on - strand, within A4249_RS13125 at 2640.609 kb on - strand, within A4249_RS13125 at 2640.609 kb on - strand, within A4249_RS13125 at 2640.848 kb on + strand, within A4249_RS13125 at 2640.849 kb on - strand, within A4249_RS13125 at 2641.084 kb on + strand at 2641.084 kb on + strand at 2641.084 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.207 kb on + strand at 2641.207 kb on + strand at 2641.207 kb on + strand at 2641.208 kb on - strand at 2641.208 kb on - strand at 2641.410 kb on + strand, within A4249_RS13130 at 2641.410 kb on + strand, within A4249_RS13130 at 2641.410 kb on + strand, within A4249_RS13130 at 2641.410 kb on + strand, within A4249_RS13130 at 2641.411 kb on - strand, within A4249_RS13130 at 2641.411 kb on - strand, within A4249_RS13130 at 2642.059 kb on + strand, within A4249_RS13130 at 2642.060 kb on - strand, within A4249_RS13130 at 2642.060 kb on - strand, within A4249_RS13130 at 2642.060 kb on - strand, within A4249_RS13130 at 2642.060 kb on - strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.061 kb on + strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.062 kb on - strand, within A4249_RS13130 at 2642.102 kb on + strand at 2642.103 kb on - strand at 2642.103 kb on - strand at 2642.103 kb on - strand at 2642.122 kb on + strand at 2642.122 kb on + strand at 2642.122 kb on + strand at 2642.122 kb on + strand at 2642.123 kb on - strand at 2642.149 kb on + strand at 2642.149 kb on + strand at 2642.149 kb on + strand at 2642.149 kb on + strand at 2642.149 kb on + strand at 2642.149 kb on + strand at 2642.149 kb on + strand at 2642.150 kb on - strand at 2642.150 kb on - strand at 2642.150 kb on - strand at 2642.150 kb on - strand at 2642.152 kb on - strand at 2642.221 kb on + strand at 2642.222 kb on - strand at 2642.987 kb on + strand at 2642.988 kb on - strand at 2642.988 kb on - strand at 2643.037 kb on + strand at 2643.037 kb on + strand at 2643.037 kb on + strand at 2643.037 kb on + strand at 2643.037 kb on + strand at 2643.037 kb on + strand at 2643.038 kb on - strand at 2643.055 kb on + strand at 2643.056 kb on - strand at 2643.066 kb on + strand, within A4249_RS13140 at 2643.066 kb on + strand, within A4249_RS13140 at 2643.066 kb on + strand, within A4249_RS13140
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,640,311 + +0.2 2,640,507 - A4249_RS13125 0.27 -1.8 2,640,608 + A4249_RS13125 0.41 +0.6 2,640,608 + A4249_RS13125 0.41 -1.3 2,640,608 + A4249_RS13125 0.41 +0.2 2,640,609 - A4249_RS13125 0.41 +0.7 2,640,609 - A4249_RS13125 0.41 -0.7 2,640,609 - A4249_RS13125 0.41 -0.2 2,640,848 + A4249_RS13125 0.74 -1.4 2,640,849 - A4249_RS13125 0.74 -0.7 2,641,084 + -0.2 2,641,084 + +0.0 2,641,084 + +0.5 2,641,105 + -1.3 2,641,105 + -0.8 2,641,105 + -0.0 2,641,105 + +0.7 2,641,105 + +0.2 2,641,106 - -0.1 2,641,106 - -0.3 2,641,106 - -1.2 2,641,106 - -0.1 2,641,106 - +0.6 2,641,207 + -0.5 2,641,207 + +1.1 2,641,207 + +0.1 2,641,208 - +0.6 2,641,208 - -0.2 2,641,410 + A4249_RS13130 0.28 -0.9 2,641,410 + A4249_RS13130 0.28 -0.1 2,641,410 + A4249_RS13130 0.28 -0.4 2,641,410 + A4249_RS13130 0.28 -0.3 2,641,411 - A4249_RS13130 0.28 +1.1 2,641,411 - A4249_RS13130 0.28 +1.1 2,642,059 + A4249_RS13130 0.87 +0.2 2,642,060 - A4249_RS13130 0.87 -0.5 2,642,060 - A4249_RS13130 0.87 +0.3 2,642,060 - A4249_RS13130 0.87 -2.3 2,642,060 - A4249_RS13130 0.87 +0.0 2,642,061 + A4249_RS13130 0.88 +0.2 2,642,061 + A4249_RS13130 0.88 -0.5 2,642,061 + A4249_RS13130 0.88 -1.3 2,642,061 + A4249_RS13130 0.88 +0.6 2,642,061 + A4249_RS13130 0.88 +0.4 2,642,061 + A4249_RS13130 0.88 -0.7 2,642,061 + A4249_RS13130 0.88 -0.1 2,642,062 - A4249_RS13130 0.88 +0.2 2,642,062 - A4249_RS13130 0.88 +0.1 2,642,062 - A4249_RS13130 0.88 +0.6 2,642,062 - A4249_RS13130 0.88 +0.5 2,642,062 - A4249_RS13130 0.88 +0.6 2,642,062 - A4249_RS13130 0.88 +0.2 2,642,062 - A4249_RS13130 0.88 +0.9 2,642,062 - A4249_RS13130 0.88 +0.1 2,642,062 - A4249_RS13130 0.88 +0.3 2,642,062 - A4249_RS13130 0.88 +0.9 2,642,062 - A4249_RS13130 0.88 +0.5 2,642,102 + +0.6 2,642,103 - +0.1 2,642,103 - -0.7 2,642,103 - -0.7 2,642,122 + -0.1 2,642,122 + +0.9 2,642,122 + -0.5 2,642,122 + -0.9 2,642,123 - -0.1 2,642,149 + +0.1 2,642,149 + -0.8 2,642,149 + +0.6 2,642,149 + +0.1 2,642,149 + -0.1 2,642,149 + +0.6 2,642,149 + +0.2 2,642,150 - +0.3 2,642,150 - +0.3 2,642,150 - +0.1 2,642,150 - -0.3 2,642,152 - +0.1 2,642,221 + -0.2 2,642,222 - +0.9 2,642,987 + +0.6 2,642,988 - -0.3 2,642,988 - +0.3 2,643,037 + -0.2 2,643,037 + -0.3 2,643,037 + +0.3 2,643,037 + -0.7 2,643,037 + -0.6 2,643,037 + -0.2 2,643,038 - +0.0 2,643,055 + -0.3 2,643,056 - -0.1 2,643,066 + A4249_RS13140 0.10 +0.6 2,643,066 + A4249_RS13140 0.10 -0.6 2,643,066 + A4249_RS13140 0.10 +0.7
Or see this region's nucleotide sequence