Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12985 and A4249_RS12990 overlap by 8 nucleotides A4249_RS12990 and A4249_RS12995 are separated by 42 nucleotides
A4249_RS12985: A4249_RS12985 - GDP-mannose 4,6-dehydratase, at 2,605,075 to 2,606,067
_RS12985
A4249_RS12990: A4249_RS12990 - ABC transporter permease, at 2,606,060 to 2,606,878
_RS12990
A4249_RS12995: A4249_RS12995 - chain-length determining protein, at 2,606,921 to 2,608,084
_RS12995
Position (kb)
2606
2607 Strain fitness (log2 ratio)
-1
0
1 at 2605.064 kb on + strand at 2605.064 kb on + strand at 2605.064 kb on + strand at 2605.064 kb on + strand at 2605.065 kb on - strand at 2605.212 kb on + strand, within A4249_RS12985 at 2605.213 kb on - strand, within A4249_RS12985 at 2605.437 kb on + strand, within A4249_RS12985 at 2605.463 kb on + strand, within A4249_RS12985 at 2605.463 kb on + strand, within A4249_RS12985 at 2605.463 kb on + strand, within A4249_RS12985 at 2605.463 kb on + strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.464 kb on - strand, within A4249_RS12985 at 2605.465 kb on + strand, within A4249_RS12985 at 2605.465 kb on + strand, within A4249_RS12985 at 2605.466 kb on - strand, within A4249_RS12985 at 2605.466 kb on - strand, within A4249_RS12985 at 2605.528 kb on + strand, within A4249_RS12985 at 2605.528 kb on + strand, within A4249_RS12985 at 2605.528 kb on + strand, within A4249_RS12985 at 2605.529 kb on - strand, within A4249_RS12985 at 2605.529 kb on - strand, within A4249_RS12985 at 2605.593 kb on + strand, within A4249_RS12985 at 2605.599 kb on - strand, within A4249_RS12985 at 2605.617 kb on + strand, within A4249_RS12985 at 2605.617 kb on + strand, within A4249_RS12985 at 2605.617 kb on + strand, within A4249_RS12985 at 2605.617 kb on + strand, within A4249_RS12985 at 2605.661 kb on + strand, within A4249_RS12985 at 2605.662 kb on - strand, within A4249_RS12985 at 2605.662 kb on - strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.757 kb on + strand, within A4249_RS12985 at 2605.765 kb on + strand, within A4249_RS12985 at 2605.765 kb on + strand, within A4249_RS12985 at 2605.765 kb on + strand, within A4249_RS12985 at 2605.781 kb on + strand, within A4249_RS12985 at 2605.781 kb on + strand, within A4249_RS12985 at 2605.781 kb on + strand, within A4249_RS12985 at 2605.781 kb on + strand, within A4249_RS12985 at 2605.781 kb on + strand, within A4249_RS12985 at 2605.782 kb on - strand, within A4249_RS12985 at 2605.813 kb on + strand, within A4249_RS12985 at 2605.813 kb on + strand, within A4249_RS12985 at 2605.813 kb on + strand, within A4249_RS12985 at 2605.813 kb on + strand, within A4249_RS12985 at 2605.813 kb on + strand, within A4249_RS12985 at 2605.853 kb on + strand, within A4249_RS12985 at 2605.853 kb on + strand, within A4249_RS12985 at 2605.853 kb on + strand, within A4249_RS12985 at 2606.026 kb on + strand at 2606.026 kb on + strand at 2606.054 kb on + strand at 2606.876 kb on + strand at 2606.894 kb on + strand at 2606.906 kb on + strand at 2606.906 kb on + strand at 2606.906 kb on + strand at 2606.906 kb on + strand at 2606.906 kb on + strand at 2606.906 kb on + strand at 2606.906 kb on + strand at 2606.915 kb on + strand at 2606.915 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,605,064 + -0.0 2,605,064 + +0.3 2,605,064 + +0.5 2,605,064 + -0.6 2,605,065 - -0.2 2,605,212 + A4249_RS12985 0.14 +0.1 2,605,213 - A4249_RS12985 0.14 +1.0 2,605,437 + A4249_RS12985 0.36 +0.1 2,605,463 + A4249_RS12985 0.39 -0.7 2,605,463 + A4249_RS12985 0.39 -0.6 2,605,463 + A4249_RS12985 0.39 +0.6 2,605,463 + A4249_RS12985 0.39 +0.9 2,605,464 - A4249_RS12985 0.39 +1.6 2,605,464 - A4249_RS12985 0.39 +0.3 2,605,464 - A4249_RS12985 0.39 +0.2 2,605,464 - A4249_RS12985 0.39 -1.2 2,605,464 - A4249_RS12985 0.39 +0.4 2,605,464 - A4249_RS12985 0.39 -0.8 2,605,464 - A4249_RS12985 0.39 +0.1 2,605,465 + A4249_RS12985 0.39 +0.1 2,605,465 + A4249_RS12985 0.39 +0.1 2,605,466 - A4249_RS12985 0.39 +0.8 2,605,466 - A4249_RS12985 0.39 -0.3 2,605,528 + A4249_RS12985 0.46 -0.0 2,605,528 + A4249_RS12985 0.46 +0.1 2,605,528 + A4249_RS12985 0.46 +0.1 2,605,529 - A4249_RS12985 0.46 +0.5 2,605,529 - A4249_RS12985 0.46 +1.6 2,605,593 + A4249_RS12985 0.52 +0.4 2,605,599 - A4249_RS12985 0.53 +0.1 2,605,617 + A4249_RS12985 0.55 -0.2 2,605,617 + A4249_RS12985 0.55 +0.9 2,605,617 + A4249_RS12985 0.55 -0.3 2,605,617 + A4249_RS12985 0.55 -0.5 2,605,661 + A4249_RS12985 0.59 -0.4 2,605,662 - A4249_RS12985 0.59 +1.2 2,605,662 - A4249_RS12985 0.59 -0.8 2,605,757 + A4249_RS12985 0.69 -0.1 2,605,757 + A4249_RS12985 0.69 +0.4 2,605,757 + A4249_RS12985 0.69 -0.4 2,605,757 + A4249_RS12985 0.69 +0.0 2,605,757 + A4249_RS12985 0.69 +0.3 2,605,757 + A4249_RS12985 0.69 -0.3 2,605,757 + A4249_RS12985 0.69 -0.1 2,605,757 + A4249_RS12985 0.69 +0.0 2,605,757 + A4249_RS12985 0.69 -0.5 2,605,757 + A4249_RS12985 0.69 +0.0 2,605,757 + A4249_RS12985 0.69 -0.2 2,605,757 + A4249_RS12985 0.69 -0.1 2,605,765 + A4249_RS12985 0.69 +0.6 2,605,765 + A4249_RS12985 0.69 +0.9 2,605,765 + A4249_RS12985 0.69 +0.9 2,605,781 + A4249_RS12985 0.71 +0.6 2,605,781 + A4249_RS12985 0.71 +1.2 2,605,781 + A4249_RS12985 0.71 -0.1 2,605,781 + A4249_RS12985 0.71 +1.2 2,605,781 + A4249_RS12985 0.71 +0.4 2,605,782 - A4249_RS12985 0.71 +0.8 2,605,813 + A4249_RS12985 0.74 +0.1 2,605,813 + A4249_RS12985 0.74 +0.0 2,605,813 + A4249_RS12985 0.74 +0.4 2,605,813 + A4249_RS12985 0.74 +0.0 2,605,813 + A4249_RS12985 0.74 +1.6 2,605,853 + A4249_RS12985 0.78 -0.2 2,605,853 + A4249_RS12985 0.78 +0.5 2,605,853 + A4249_RS12985 0.78 +0.1 2,606,026 + +1.1 2,606,026 + +0.2 2,606,054 + +0.3 2,606,876 + -0.3 2,606,894 + +0.1 2,606,906 + -0.2 2,606,906 + -0.4 2,606,906 + -0.9 2,606,906 + +0.9 2,606,906 + +1.4 2,606,906 + -0.9 2,606,906 + -0.1 2,606,915 + +0.4 2,606,915 + -0.2
Or see this region's nucleotide sequence