Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11750

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11740 and A4249_RS11745 overlap by 4 nucleotidesA4249_RS11745 and A4249_RS11750 overlap by 4 nucleotidesA4249_RS11750 and A4249_RS11755 are separated by 8 nucleotides A4249_RS11740: A4249_RS11740 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,357,396 to 2,358,007 _RS11740 A4249_RS11745: A4249_RS11745 - cation transporter, at 2,358,004 to 2,358,609 _RS11745 A4249_RS11750: A4249_RS11750 - CusA/CzcA family heavy metal efflux RND transporter, at 2,358,606 to 2,361,830 _RS11750 A4249_RS11755: A4249_RS11755 - efflux RND transporter periplasmic adaptor subunit, at 2,361,839 to 2,363,041 _RS11755 Position (kb) 2358 2359 2360 2361 2362Strain fitness (log2 ratio) -2 -1 0 1 2at 2357.748 kb on + strand, within A4249_RS11740at 2357.748 kb on + strand, within A4249_RS11740at 2357.748 kb on + strand, within A4249_RS11740at 2357.749 kb on - strand, within A4249_RS11740at 2357.772 kb on + strand, within A4249_RS11740at 2357.772 kb on + strand, within A4249_RS11740at 2357.773 kb on - strand, within A4249_RS11740at 2357.817 kb on + strand, within A4249_RS11740at 2357.817 kb on + strand, within A4249_RS11740at 2357.817 kb on + strand, within A4249_RS11740at 2357.817 kb on - strand, within A4249_RS11740at 2357.818 kb on - strand, within A4249_RS11740at 2357.818 kb on - strand, within A4249_RS11740at 2358.052 kb on + strandat 2358.052 kb on + strandat 2358.053 kb on - strandat 2358.053 kb on - strandat 2358.079 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.446 kb on + strand, within A4249_RS11745at 2358.447 kb on - strand, within A4249_RS11745at 2358.447 kb on - strand, within A4249_RS11745at 2358.447 kb on - strand, within A4249_RS11745at 2358.771 kb on - strandat 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.516 kb on + strand, within A4249_RS11750at 2359.517 kb on - strand, within A4249_RS11750at 2359.517 kb on - strand, within A4249_RS11750at 2359.517 kb on - strand, within A4249_RS11750at 2359.666 kb on + strand, within A4249_RS11750at 2359.666 kb on + strand, within A4249_RS11750at 2359.666 kb on + strand, within A4249_RS11750at 2359.666 kb on + strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2359.667 kb on - strand, within A4249_RS11750at 2360.513 kb on + strand, within A4249_RS11750at 2361.079 kb on + strand, within A4249_RS11750at 2361.079 kb on + strand, within A4249_RS11750at 2361.079 kb on + strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.080 kb on - strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.181 kb on + strand, within A4249_RS11750at 2361.182 kb on - strand, within A4249_RS11750at 2361.193 kb on + strand, within A4249_RS11750at 2361.193 kb on + strand, within A4249_RS11750at 2361.194 kb on - strand, within A4249_RS11750at 2361.194 kb on - strand, within A4249_RS11750at 2361.277 kb on + strand, within A4249_RS11750at 2361.277 kb on + strand, within A4249_RS11750at 2361.277 kb on + strand, within A4249_RS11750at 2361.278 kb on - strand, within A4249_RS11750at 2361.278 kb on - strand, within A4249_RS11750at 2361.278 kb on - strand, within A4249_RS11750at 2361.328 kb on + strand, within A4249_RS11750at 2361.328 kb on + strand, within A4249_RS11750at 2361.329 kb on - strand, within A4249_RS11750at 2361.520 kb on + strandat 2361.520 kb on + strandat 2361.520 kb on + strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.521 kb on - strandat 2361.605 kb on + strandat 2361.606 kb on - strandat 2361.632 kb on - strandat 2361.729 kb on + strandat 2361.729 kb on + strandat 2361.730 kb on - strandat 2361.730 kb on - strandat 2361.745 kb on + strandat 2361.745 kb on + strandat 2361.745 kb on + strandat 2361.746 kb on - strandat 2361.746 kb on - strandat 2361.746 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.816 kb on - strandat 2361.840 kb on + strandat 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.554 kb on + strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.555 kb on - strand, within A4249_RS11755at 2362.746 kb on - strand, within A4249_RS11755

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,357,748 + A4249_RS11740 0.58 +1.0
2,357,748 + A4249_RS11740 0.58 -0.3
2,357,748 + A4249_RS11740 0.58 +0.0
2,357,749 - A4249_RS11740 0.58 -0.8
2,357,772 + A4249_RS11740 0.61 -0.1
2,357,772 + A4249_RS11740 0.61 +0.1
2,357,773 - A4249_RS11740 0.62 -0.7
2,357,817 + A4249_RS11740 0.69 -0.4
2,357,817 + A4249_RS11740 0.69 -0.7
2,357,817 + A4249_RS11740 0.69 -0.0
2,357,817 - A4249_RS11740 0.69 -0.0
2,357,818 - A4249_RS11740 0.69 -1.4
2,357,818 - A4249_RS11740 0.69 +1.1
2,358,052 + +0.2
2,358,052 + -0.2
2,358,053 - -1.5
2,358,053 - +0.6
2,358,079 + A4249_RS11745 0.12 -0.7
2,358,446 + A4249_RS11745 0.73 +1.8
2,358,446 + A4249_RS11745 0.73 -1.5
2,358,446 + A4249_RS11745 0.73 -0.8
2,358,446 + A4249_RS11745 0.73 -0.2
2,358,446 + A4249_RS11745 0.73 +0.2
2,358,447 - A4249_RS11745 0.73 +1.2
2,358,447 - A4249_RS11745 0.73 +0.6
2,358,447 - A4249_RS11745 0.73 -0.2
2,358,771 - +0.5
2,359,516 + A4249_RS11750 0.28 -0.0
2,359,516 + A4249_RS11750 0.28 +0.4
2,359,516 + A4249_RS11750 0.28 +0.7
2,359,516 + A4249_RS11750 0.28 -0.3
2,359,516 + A4249_RS11750 0.28 +0.0
2,359,516 + A4249_RS11750 0.28 +0.1
2,359,516 + A4249_RS11750 0.28 -0.3
2,359,516 + A4249_RS11750 0.28 -1.4
2,359,516 + A4249_RS11750 0.28 -0.6
2,359,516 + A4249_RS11750 0.28 +0.0
2,359,517 - A4249_RS11750 0.28 +0.3
2,359,517 - A4249_RS11750 0.28 +0.4
2,359,517 - A4249_RS11750 0.28 +0.2
2,359,666 + A4249_RS11750 0.33 -0.5
2,359,666 + A4249_RS11750 0.33 -0.4
2,359,666 + A4249_RS11750 0.33 +0.8
2,359,666 + A4249_RS11750 0.33 -0.3
2,359,667 - A4249_RS11750 0.33 -0.7
2,359,667 - A4249_RS11750 0.33 -0.5
2,359,667 - A4249_RS11750 0.33 +0.2
2,359,667 - A4249_RS11750 0.33 +0.4
2,359,667 - A4249_RS11750 0.33 +0.1
2,359,667 - A4249_RS11750 0.33 -0.1
2,359,667 - A4249_RS11750 0.33 -0.1
2,360,513 + A4249_RS11750 0.59 +0.6
2,361,079 + A4249_RS11750 0.77 -0.3
2,361,079 + A4249_RS11750 0.77 +0.2
2,361,079 + A4249_RS11750 0.77 -0.4
2,361,080 - A4249_RS11750 0.77 -0.4
2,361,080 - A4249_RS11750 0.77 -0.5
2,361,080 - A4249_RS11750 0.77 -1.8
2,361,080 - A4249_RS11750 0.77 -0.1
2,361,181 + A4249_RS11750 0.80 -0.8
2,361,181 + A4249_RS11750 0.80 -0.1
2,361,181 + A4249_RS11750 0.80 +0.2
2,361,181 + A4249_RS11750 0.80 -0.7
2,361,181 + A4249_RS11750 0.80 +0.1
2,361,181 + A4249_RS11750 0.80 -0.1
2,361,182 - A4249_RS11750 0.80 -0.4
2,361,193 + A4249_RS11750 0.80 -0.6
2,361,193 + A4249_RS11750 0.80 -0.0
2,361,194 - A4249_RS11750 0.80 -0.1
2,361,194 - A4249_RS11750 0.80 -0.1
2,361,277 + A4249_RS11750 0.83 +0.2
2,361,277 + A4249_RS11750 0.83 -1.0
2,361,277 + A4249_RS11750 0.83 +0.2
2,361,278 - A4249_RS11750 0.83 +0.1
2,361,278 - A4249_RS11750 0.83 +0.0
2,361,278 - A4249_RS11750 0.83 +0.2
2,361,328 + A4249_RS11750 0.84 +0.1
2,361,328 + A4249_RS11750 0.84 -0.3
2,361,329 - A4249_RS11750 0.84 +0.5
2,361,520 + +0.3
2,361,520 + -0.4
2,361,520 + -0.0
2,361,521 - +1.0
2,361,521 - +2.0
2,361,521 - -0.5
2,361,521 - +1.1
2,361,521 - -0.1
2,361,521 - -0.5
2,361,605 + +1.2
2,361,606 - +0.7
2,361,632 - -0.4
2,361,729 + +0.4
2,361,729 + -1.2
2,361,730 - -0.0
2,361,730 - +0.1
2,361,745 + +0.2
2,361,745 + +0.1
2,361,745 + +0.1
2,361,746 - -0.1
2,361,746 - +0.6
2,361,746 - -0.4
2,361,816 - +0.0
2,361,816 - -0.2
2,361,816 - -0.7
2,361,816 - +0.3
2,361,816 - -0.0
2,361,840 + -0.1
2,362,554 + A4249_RS11755 0.59 +1.1
2,362,554 + A4249_RS11755 0.59 +0.8
2,362,554 + A4249_RS11755 0.59 -0.5
2,362,554 + A4249_RS11755 0.59 +0.2
2,362,555 - A4249_RS11755 0.60 -1.1
2,362,555 - A4249_RS11755 0.60 -0.7
2,362,555 - A4249_RS11755 0.60 -1.2
2,362,555 - A4249_RS11755 0.60 -0.6
2,362,555 - A4249_RS11755 0.60 +0.3
2,362,555 - A4249_RS11755 0.60 +0.4
2,362,746 - A4249_RS11755 0.75 -0.4

Or see this region's nucleotide sequence