Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11660

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11645 and A4249_RS11650 are separated by 77 nucleotidesA4249_RS11650 and A4249_RS16355 are separated by 12 nucleotidesA4249_RS16355 and A4249_RS11660 are separated by 153 nucleotidesA4249_RS11660 and A4249_RS11665 are separated by 65 nucleotides A4249_RS11645: A4249_RS11645 - helix-turn-helix domain-containing protein, at 2,339,254 to 2,339,661 _RS11645 A4249_RS11650: A4249_RS11650 - mercuric transporter MerT family protein, at 2,339,739 to 2,340,134 _RS11650 A4249_RS16355: A4249_RS16355 - cation transporter, at 2,340,147 to 2,340,476 _RS16355 A4249_RS11660: A4249_RS11660 - mercury resistance system transport protein MerF, at 2,340,630 to 2,340,872 _RS11660 A4249_RS11665: A4249_RS11665 - NAD(P)/FAD-dependent oxidoreductase, at 2,340,938 to 2,342,293 _RS11665 Position (kb) 2340 2341Strain fitness (log2 ratio) -2 -1 0 1at 2339.682 kb on + strandat 2339.690 kb on - strandat 2339.698 kb on + strandat 2339.698 kb on + strandat 2339.699 kb on - strandat 2339.699 kb on - strandat 2339.734 kb on + strandat 2339.735 kb on - strandat 2339.735 kb on - strandat 2339.937 kb on + strand, within A4249_RS11650at 2339.937 kb on + strand, within A4249_RS11650at 2339.937 kb on + strand, within A4249_RS11650at 2339.937 kb on + strand, within A4249_RS11650at 2339.937 kb on + strand, within A4249_RS11650at 2339.938 kb on - strand, within A4249_RS11650at 2339.938 kb on - strand, within A4249_RS11650at 2339.989 kb on - strand, within A4249_RS11650at 2339.989 kb on - strand, within A4249_RS11650at 2339.989 kb on - strand, within A4249_RS11650at 2339.989 kb on - strand, within A4249_RS11650at 2339.989 kb on - strand, within A4249_RS11650at 2339.989 kb on - strand, within A4249_RS11650at 2340.024 kb on + strand, within A4249_RS11650at 2340.025 kb on - strand, within A4249_RS11650at 2340.124 kb on - strandat 2340.130 kb on - strandat 2340.393 kb on + strand, within A4249_RS16355at 2340.393 kb on + strand, within A4249_RS16355at 2340.393 kb on + strand, within A4249_RS16355at 2340.393 kb on + strand, within A4249_RS16355at 2340.394 kb on - strand, within A4249_RS16355at 2340.394 kb on - strand, within A4249_RS16355at 2340.394 kb on - strand, within A4249_RS16355at 2340.394 kb on - strand, within A4249_RS16355at 2340.394 kb on - strand, within A4249_RS16355at 2340.394 kb on - strand, within A4249_RS16355at 2340.466 kb on + strandat 2340.466 kb on + strandat 2340.466 kb on + strandat 2340.467 kb on - strandat 2340.467 kb on - strandat 2340.467 kb on - strandat 2340.467 kb on - strandat 2340.474 kb on + strandat 2340.474 kb on + strandat 2340.475 kb on - strandat 2340.475 kb on - strandat 2340.831 kb on + strand, within A4249_RS11660at 2340.831 kb on + strand, within A4249_RS11660at 2340.831 kb on + strand, within A4249_RS11660at 2340.831 kb on + strand, within A4249_RS11660at 2340.831 kb on + strand, within A4249_RS11660at 2340.832 kb on - strand, within A4249_RS11660at 2340.832 kb on - strand, within A4249_RS11660at 2340.832 kb on - strand, within A4249_RS11660at 2340.832 kb on - strand, within A4249_RS11660at 2340.832 kb on - strand, within A4249_RS11660at 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.950 kb on + strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.951 kb on - strandat 2340.956 kb on + strandat 2340.956 kb on + strandat 2340.956 kb on + strandat 2341.311 kb on + strand, within A4249_RS11665at 2341.312 kb on - strand, within A4249_RS11665at 2341.312 kb on - strand, within A4249_RS11665at 2341.490 kb on - strand, within A4249_RS11665at 2341.673 kb on + strand, within A4249_RS11665at 2341.673 kb on + strand, within A4249_RS11665at 2341.674 kb on - strand, within A4249_RS11665at 2341.819 kb on + strand, within A4249_RS11665at 2341.819 kb on + strand, within A4249_RS11665at 2341.820 kb on - strand, within A4249_RS11665at 2341.820 kb on - strand, within A4249_RS11665at 2341.820 kb on - strand, within A4249_RS11665at 2341.820 kb on - strand, within A4249_RS11665at 2341.820 kb on - strand, within A4249_RS11665at 2341.820 kb on - strand, within A4249_RS11665

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,339,682 + -0.1
2,339,690 - -0.5
2,339,698 + +0.1
2,339,698 + +0.4
2,339,699 - +1.2
2,339,699 - -0.1
2,339,734 + +0.9
2,339,735 - -1.1
2,339,735 - +0.1
2,339,937 + A4249_RS11650 0.50 -0.7
2,339,937 + A4249_RS11650 0.50 +0.1
2,339,937 + A4249_RS11650 0.50 -0.3
2,339,937 + A4249_RS11650 0.50 -0.5
2,339,937 + A4249_RS11650 0.50 -0.1
2,339,938 - A4249_RS11650 0.50 -0.4
2,339,938 - A4249_RS11650 0.50 +0.1
2,339,989 - A4249_RS11650 0.63 +0.7
2,339,989 - A4249_RS11650 0.63 -0.3
2,339,989 - A4249_RS11650 0.63 +0.2
2,339,989 - A4249_RS11650 0.63 +0.2
2,339,989 - A4249_RS11650 0.63 -1.9
2,339,989 - A4249_RS11650 0.63 -0.1
2,340,024 + A4249_RS11650 0.72 -0.2
2,340,025 - A4249_RS11650 0.72 +0.6
2,340,124 - -0.5
2,340,130 - +1.0
2,340,393 + A4249_RS16355 0.75 +0.9
2,340,393 + A4249_RS16355 0.75 -0.4
2,340,393 + A4249_RS16355 0.75 -0.2
2,340,393 + A4249_RS16355 0.75 -0.5
2,340,394 - A4249_RS16355 0.75 +0.7
2,340,394 - A4249_RS16355 0.75 +0.1
2,340,394 - A4249_RS16355 0.75 -0.7
2,340,394 - A4249_RS16355 0.75 -0.8
2,340,394 - A4249_RS16355 0.75 +0.4
2,340,394 - A4249_RS16355 0.75 +0.9
2,340,466 + -0.2
2,340,466 + +0.5
2,340,466 + +0.4
2,340,467 - -0.2
2,340,467 - -1.6
2,340,467 - +0.4
2,340,467 - +0.4
2,340,474 + -0.2
2,340,474 + -0.3
2,340,475 - -0.6
2,340,475 - +0.1
2,340,831 + A4249_RS11660 0.83 +0.8
2,340,831 + A4249_RS11660 0.83 +0.3
2,340,831 + A4249_RS11660 0.83 -1.0
2,340,831 + A4249_RS11660 0.83 +0.6
2,340,831 + A4249_RS11660 0.83 -0.5
2,340,832 - A4249_RS11660 0.83 -0.6
2,340,832 - A4249_RS11660 0.83 +1.0
2,340,832 - A4249_RS11660 0.83 +0.1
2,340,832 - A4249_RS11660 0.83 +0.1
2,340,832 - A4249_RS11660 0.83 +0.7
2,340,950 + -0.0
2,340,950 + -0.0
2,340,950 + -0.6
2,340,950 + +1.3
2,340,950 + +0.2
2,340,950 + +0.7
2,340,950 + +0.3
2,340,950 + -0.1
2,340,950 + +0.4
2,340,950 + +0.3
2,340,950 + -2.6
2,340,950 + -0.4
2,340,950 + -0.5
2,340,950 + -1.6
2,340,950 + +0.6
2,340,950 + -0.3
2,340,950 + +0.1
2,340,950 + +1.1
2,340,950 + -0.1
2,340,950 + -0.5
2,340,950 + -0.7
2,340,950 + -1.5
2,340,950 + +0.6
2,340,950 + -0.2
2,340,951 - -0.3
2,340,951 - +0.1
2,340,951 - -0.2
2,340,951 - +0.4
2,340,951 - -0.2
2,340,951 - -0.7
2,340,951 - +1.2
2,340,951 - -0.1
2,340,951 - +0.4
2,340,951 - -0.9
2,340,951 - -0.2
2,340,951 - -0.7
2,340,951 - -0.5
2,340,951 - -0.1
2,340,951 - -0.5
2,340,951 - +0.2
2,340,951 - +0.7
2,340,951 - +0.4
2,340,951 - -0.0
2,340,951 - -0.1
2,340,951 - +0.5
2,340,951 - -0.3
2,340,951 - -0.3
2,340,951 - +0.0
2,340,951 - -0.2
2,340,951 - -0.1
2,340,951 - +0.6
2,340,951 - +0.4
2,340,956 + +0.7
2,340,956 + -0.2
2,340,956 + -0.1
2,341,311 + A4249_RS11665 0.28 -0.8
2,341,312 - A4249_RS11665 0.28 +0.9
2,341,312 - A4249_RS11665 0.28 +0.3
2,341,490 - A4249_RS11665 0.41 -0.7
2,341,673 + A4249_RS11665 0.54 -1.0
2,341,673 + A4249_RS11665 0.54 +0.3
2,341,674 - A4249_RS11665 0.54 +0.1
2,341,819 + A4249_RS11665 0.65 +0.7
2,341,819 + A4249_RS11665 0.65 +0.2
2,341,820 - A4249_RS11665 0.65 -0.3
2,341,820 - A4249_RS11665 0.65 -0.7
2,341,820 - A4249_RS11665 0.65 -0.8
2,341,820 - A4249_RS11665 0.65 +0.2
2,341,820 - A4249_RS11665 0.65 -0.1
2,341,820 - A4249_RS11665 0.65 +0.6

Or see this region's nucleotide sequence