Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10860 and A4249_RS10865 are separated by 59 nucleotides A4249_RS10865 and A4249_RS10870 are separated by 3 nucleotides A4249_RS10870 and A4249_RS10875 are separated by 187 nucleotides
A4249_RS10860: A4249_RS10860 - metalloprotease TldD, at 2,182,440 to 2,183,870
_RS10860
A4249_RS10865: A4249_RS10865 - hypothetical protein, at 2,183,930 to 2,184,217
_RS10865
A4249_RS10870: A4249_RS10870 - TraB/GumN family protein, at 2,184,221 to 2,185,132
_RS10870
A4249_RS10875: A4249_RS10875 - TonB-dependent receptor, at 2,185,320 to 2,187,389
_RS10875
Position (kb)
2184
2185
2186 Strain fitness (log2 ratio)
-2
-1
0
1 at 2183.246 kb on + strand, within A4249_RS10860 at 2183.247 kb on - strand, within A4249_RS10860 at 2183.492 kb on + strand, within A4249_RS10860 at 2183.492 kb on + strand, within A4249_RS10860 at 2183.493 kb on - strand, within A4249_RS10860 at 2183.493 kb on - strand, within A4249_RS10860 at 2183.516 kb on + strand, within A4249_RS10860 at 2183.516 kb on + strand, within A4249_RS10860 at 2183.517 kb on - strand, within A4249_RS10860 at 2183.517 kb on - strand, within A4249_RS10860 at 2183.517 kb on - strand, within A4249_RS10860 at 2183.517 kb on - strand, within A4249_RS10860 at 2183.517 kb on - strand, within A4249_RS10860 at 2183.517 kb on - strand, within A4249_RS10860 at 2183.565 kb on - strand, within A4249_RS10860 at 2183.565 kb on - strand, within A4249_RS10860 at 2183.565 kb on - strand, within A4249_RS10860 at 2183.580 kb on + strand, within A4249_RS10860 at 2183.581 kb on - strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.642 kb on + strand, within A4249_RS10860 at 2183.643 kb on - strand, within A4249_RS10860 at 2183.643 kb on - strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.652 kb on + strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2183.653 kb on - strand, within A4249_RS10860 at 2184.087 kb on - strand, within A4249_RS10865 at 2184.087 kb on - strand, within A4249_RS10865 at 2184.215 kb on + strand at 2184.215 kb on + strand at 2184.215 kb on + strand at 2184.215 kb on + strand at 2184.215 kb on + strand at 2184.216 kb on - strand at 2184.216 kb on - strand at 2184.216 kb on - strand at 2184.216 kb on - strand at 2184.216 kb on - strand at 2184.223 kb on - strand at 2184.223 kb on - strand at 2184.302 kb on + strand at 2184.303 kb on - strand at 2184.303 kb on - strand at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.392 kb on + strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.393 kb on - strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.394 kb on + strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.395 kb on - strand, within A4249_RS10870 at 2184.432 kb on + strand, within A4249_RS10870 at 2184.432 kb on + strand, within A4249_RS10870 at 2184.433 kb on - strand, within A4249_RS10870 at 2184.573 kb on + strand, within A4249_RS10870 at 2184.708 kb on + strand, within A4249_RS10870 at 2184.709 kb on - strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.813 kb on + strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2184.814 kb on - strand, within A4249_RS10870 at 2185.143 kb on - strand at 2185.143 kb on - strand at 2185.152 kb on - strand at 2185.152 kb on - strand at 2185.175 kb on + strand at 2185.209 kb on + strand at 2185.210 kb on - strand at 2185.210 kb on - strand at 2185.223 kb on + strand at 2185.223 kb on + strand at 2185.223 kb on + strand at 2185.224 kb on - strand at 2185.260 kb on + strand at 2185.261 kb on - strand at 2185.261 kb on - strand at 2185.511 kb on + strand at 2185.512 kb on - strand at 2185.732 kb on - strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.827 kb on + strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.828 kb on - strand, within A4249_RS10875 at 2185.839 kb on + strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.840 kb on - strand, within A4249_RS10875 at 2185.974 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.019 kb on + strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.020 kb on - strand, within A4249_RS10875 at 2186.065 kb on - strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.079 kb on + strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.080 kb on - strand, within A4249_RS10875 at 2186.130 kb on + strand, within A4249_RS10875 at 2186.131 kb on - strand, within A4249_RS10875 at 2186.131 kb on - strand, within A4249_RS10875
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,183,246 + A4249_RS10860 0.56 +0.1 2,183,247 - A4249_RS10860 0.56 -0.4 2,183,492 + A4249_RS10860 0.74 -0.6 2,183,492 + A4249_RS10860 0.74 -0.3 2,183,493 - A4249_RS10860 0.74 +0.2 2,183,493 - A4249_RS10860 0.74 -0.0 2,183,516 + A4249_RS10860 0.75 +0.5 2,183,516 + A4249_RS10860 0.75 +0.2 2,183,517 - A4249_RS10860 0.75 -0.2 2,183,517 - A4249_RS10860 0.75 -0.0 2,183,517 - A4249_RS10860 0.75 -0.8 2,183,517 - A4249_RS10860 0.75 -0.5 2,183,517 - A4249_RS10860 0.75 +0.2 2,183,517 - A4249_RS10860 0.75 -0.2 2,183,565 - A4249_RS10860 0.79 -1.7 2,183,565 - A4249_RS10860 0.79 -0.7 2,183,565 - A4249_RS10860 0.79 +1.1 2,183,580 + A4249_RS10860 0.80 -1.5 2,183,581 - A4249_RS10860 0.80 +0.4 2,183,642 + A4249_RS10860 0.84 -0.1 2,183,642 + A4249_RS10860 0.84 +0.1 2,183,642 + A4249_RS10860 0.84 +0.3 2,183,642 + A4249_RS10860 0.84 +1.7 2,183,642 + A4249_RS10860 0.84 +0.5 2,183,642 + A4249_RS10860 0.84 +0.3 2,183,642 + A4249_RS10860 0.84 +0.3 2,183,642 + A4249_RS10860 0.84 -0.7 2,183,642 + A4249_RS10860 0.84 +0.2 2,183,642 + A4249_RS10860 0.84 +0.1 2,183,642 + A4249_RS10860 0.84 +0.0 2,183,643 - A4249_RS10860 0.84 -1.2 2,183,643 - A4249_RS10860 0.84 +0.5 2,183,652 + A4249_RS10860 0.85 -0.1 2,183,652 + A4249_RS10860 0.85 -0.1 2,183,652 + A4249_RS10860 0.85 -0.0 2,183,652 + A4249_RS10860 0.85 -0.6 2,183,652 + A4249_RS10860 0.85 -0.3 2,183,652 + A4249_RS10860 0.85 +0.0 2,183,652 + A4249_RS10860 0.85 +0.1 2,183,653 - A4249_RS10860 0.85 -0.0 2,183,653 - A4249_RS10860 0.85 -0.3 2,183,653 - A4249_RS10860 0.85 +0.2 2,183,653 - A4249_RS10860 0.85 +0.1 2,183,653 - A4249_RS10860 0.85 -0.8 2,183,653 - A4249_RS10860 0.85 -0.8 2,183,653 - A4249_RS10860 0.85 -0.2 2,183,653 - A4249_RS10860 0.85 -1.7 2,184,087 - A4249_RS10865 0.55 +0.6 2,184,087 - A4249_RS10865 0.55 +1.5 2,184,215 + -1.4 2,184,215 + -0.3 2,184,215 + +0.2 2,184,215 + -0.6 2,184,215 + -0.1 2,184,216 - +1.1 2,184,216 - -0.1 2,184,216 - +0.0 2,184,216 - -0.7 2,184,216 - -0.3 2,184,223 - -0.2 2,184,223 - -0.1 2,184,302 + -1.5 2,184,303 - -0.3 2,184,303 - -0.3 2,184,392 + A4249_RS10870 0.19 -0.1 2,184,392 + A4249_RS10870 0.19 +0.4 2,184,392 + A4249_RS10870 0.19 +0.3 2,184,392 + A4249_RS10870 0.19 -1.0 2,184,392 + A4249_RS10870 0.19 -0.1 2,184,393 - A4249_RS10870 0.19 +0.4 2,184,393 - A4249_RS10870 0.19 +0.6 2,184,393 - A4249_RS10870 0.19 -0.7 2,184,393 - A4249_RS10870 0.19 -0.1 2,184,394 + A4249_RS10870 0.19 -0.2 2,184,394 + A4249_RS10870 0.19 -1.2 2,184,394 + A4249_RS10870 0.19 -0.3 2,184,394 + A4249_RS10870 0.19 -0.2 2,184,395 - A4249_RS10870 0.19 -0.6 2,184,395 - A4249_RS10870 0.19 +0.0 2,184,395 - A4249_RS10870 0.19 -0.2 2,184,395 - A4249_RS10870 0.19 +0.7 2,184,395 - A4249_RS10870 0.19 -0.0 2,184,395 - A4249_RS10870 0.19 -0.1 2,184,395 - A4249_RS10870 0.19 -2.3 2,184,432 + A4249_RS10870 0.23 -0.5 2,184,432 + A4249_RS10870 0.23 +0.2 2,184,433 - A4249_RS10870 0.23 +0.3 2,184,573 + A4249_RS10870 0.39 +0.4 2,184,708 + A4249_RS10870 0.53 +0.3 2,184,709 - A4249_RS10870 0.54 +0.6 2,184,813 + A4249_RS10870 0.65 +0.2 2,184,813 + A4249_RS10870 0.65 +0.3 2,184,813 + A4249_RS10870 0.65 -0.1 2,184,813 + A4249_RS10870 0.65 -0.1 2,184,813 + A4249_RS10870 0.65 +0.5 2,184,813 + A4249_RS10870 0.65 +0.4 2,184,813 + A4249_RS10870 0.65 -0.1 2,184,813 + A4249_RS10870 0.65 -0.0 2,184,814 - A4249_RS10870 0.65 +0.5 2,184,814 - A4249_RS10870 0.65 -0.3 2,184,814 - A4249_RS10870 0.65 -0.3 2,184,814 - A4249_RS10870 0.65 -0.7 2,184,814 - A4249_RS10870 0.65 +0.3 2,184,814 - A4249_RS10870 0.65 +0.2 2,184,814 - A4249_RS10870 0.65 +1.1 2,184,814 - A4249_RS10870 0.65 -0.2 2,185,143 - +1.3 2,185,143 - -0.0 2,185,152 - +0.7 2,185,152 - -0.1 2,185,175 + +0.3 2,185,209 + -0.2 2,185,210 - +0.3 2,185,210 - +0.8 2,185,223 + -0.1 2,185,223 + -0.2 2,185,223 + -0.5 2,185,224 - +0.3 2,185,260 + +0.1 2,185,261 - +0.2 2,185,261 - -0.5 2,185,511 + -0.4 2,185,512 - +0.2 2,185,732 - A4249_RS10875 0.20 -0.4 2,185,827 + A4249_RS10875 0.24 -0.8 2,185,827 + A4249_RS10875 0.24 +0.2 2,185,827 + A4249_RS10875 0.24 -0.0 2,185,827 + A4249_RS10875 0.24 -0.3 2,185,827 + A4249_RS10875 0.24 +0.1 2,185,828 - A4249_RS10875 0.25 -0.0 2,185,828 - A4249_RS10875 0.25 -0.2 2,185,828 - A4249_RS10875 0.25 -0.3 2,185,828 - A4249_RS10875 0.25 -0.2 2,185,828 - A4249_RS10875 0.25 -0.2 2,185,828 - A4249_RS10875 0.25 +0.1 2,185,828 - A4249_RS10875 0.25 +0.1 2,185,828 - A4249_RS10875 0.25 +0.1 2,185,828 - A4249_RS10875 0.25 -0.0 2,185,828 - A4249_RS10875 0.25 +0.8 2,185,828 - A4249_RS10875 0.25 -0.2 2,185,828 - A4249_RS10875 0.25 +0.2 2,185,828 - A4249_RS10875 0.25 -0.4 2,185,828 - A4249_RS10875 0.25 -0.4 2,185,839 + A4249_RS10875 0.25 +0.1 2,185,840 - A4249_RS10875 0.25 -0.0 2,185,840 - A4249_RS10875 0.25 -0.5 2,185,840 - A4249_RS10875 0.25 -0.5 2,185,840 - A4249_RS10875 0.25 +0.1 2,185,974 + A4249_RS10875 0.32 +0.6 2,186,019 + A4249_RS10875 0.34 +0.1 2,186,019 + A4249_RS10875 0.34 -0.5 2,186,019 + A4249_RS10875 0.34 +0.0 2,186,019 + A4249_RS10875 0.34 +0.2 2,186,019 + A4249_RS10875 0.34 +0.2 2,186,019 + A4249_RS10875 0.34 +0.3 2,186,020 - A4249_RS10875 0.34 -1.2 2,186,020 - A4249_RS10875 0.34 -0.2 2,186,020 - A4249_RS10875 0.34 -0.4 2,186,020 - A4249_RS10875 0.34 +0.2 2,186,020 - A4249_RS10875 0.34 -0.1 2,186,065 - A4249_RS10875 0.36 +0.7 2,186,079 + A4249_RS10875 0.37 +0.0 2,186,079 + A4249_RS10875 0.37 -0.2 2,186,079 + A4249_RS10875 0.37 -0.8 2,186,079 + A4249_RS10875 0.37 -0.1 2,186,080 - A4249_RS10875 0.37 +0.2 2,186,080 - A4249_RS10875 0.37 -0.3 2,186,080 - A4249_RS10875 0.37 -0.7 2,186,080 - A4249_RS10875 0.37 -0.3 2,186,130 + A4249_RS10875 0.39 -0.3 2,186,131 - A4249_RS10875 0.39 -0.1 2,186,131 - A4249_RS10875 0.39 +0.0
Or see this region's nucleotide sequence