Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10865

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10860 and A4249_RS10865 are separated by 59 nucleotidesA4249_RS10865 and A4249_RS10870 are separated by 3 nucleotides A4249_RS10860: A4249_RS10860 - metalloprotease TldD, at 2,182,440 to 2,183,870 _RS10860 A4249_RS10865: A4249_RS10865 - hypothetical protein, at 2,183,930 to 2,184,217 _RS10865 A4249_RS10870: A4249_RS10870 - TraB/GumN family protein, at 2,184,221 to 2,185,132 _RS10870 Position (kb) 2183 2184 2185Strain fitness (log2 ratio) -2 -1 0 1at 2183.246 kb on + strand, within A4249_RS10860at 2183.247 kb on - strand, within A4249_RS10860at 2183.492 kb on + strand, within A4249_RS10860at 2183.492 kb on + strand, within A4249_RS10860at 2183.493 kb on - strand, within A4249_RS10860at 2183.493 kb on - strand, within A4249_RS10860at 2183.516 kb on + strand, within A4249_RS10860at 2183.516 kb on + strand, within A4249_RS10860at 2183.517 kb on - strand, within A4249_RS10860at 2183.517 kb on - strand, within A4249_RS10860at 2183.517 kb on - strand, within A4249_RS10860at 2183.517 kb on - strand, within A4249_RS10860at 2183.517 kb on - strand, within A4249_RS10860at 2183.517 kb on - strand, within A4249_RS10860at 2183.565 kb on - strand, within A4249_RS10860at 2183.565 kb on - strand, within A4249_RS10860at 2183.565 kb on - strand, within A4249_RS10860at 2183.580 kb on + strand, within A4249_RS10860at 2183.581 kb on - strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.642 kb on + strand, within A4249_RS10860at 2183.643 kb on - strand, within A4249_RS10860at 2183.643 kb on - strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.652 kb on + strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2183.653 kb on - strand, within A4249_RS10860at 2184.087 kb on - strand, within A4249_RS10865at 2184.087 kb on - strand, within A4249_RS10865at 2184.215 kb on + strandat 2184.215 kb on + strandat 2184.215 kb on + strandat 2184.215 kb on + strandat 2184.215 kb on + strandat 2184.216 kb on - strandat 2184.216 kb on - strandat 2184.216 kb on - strandat 2184.216 kb on - strandat 2184.216 kb on - strandat 2184.223 kb on - strandat 2184.223 kb on - strandat 2184.302 kb on + strandat 2184.303 kb on - strandat 2184.303 kb on - strandat 2184.392 kb on + strand, within A4249_RS10870at 2184.392 kb on + strand, within A4249_RS10870at 2184.392 kb on + strand, within A4249_RS10870at 2184.392 kb on + strand, within A4249_RS10870at 2184.392 kb on + strand, within A4249_RS10870at 2184.393 kb on - strand, within A4249_RS10870at 2184.393 kb on - strand, within A4249_RS10870at 2184.393 kb on - strand, within A4249_RS10870at 2184.393 kb on - strand, within A4249_RS10870at 2184.394 kb on + strand, within A4249_RS10870at 2184.394 kb on + strand, within A4249_RS10870at 2184.394 kb on + strand, within A4249_RS10870at 2184.394 kb on + strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.395 kb on - strand, within A4249_RS10870at 2184.432 kb on + strand, within A4249_RS10870at 2184.432 kb on + strand, within A4249_RS10870at 2184.433 kb on - strand, within A4249_RS10870at 2184.573 kb on + strand, within A4249_RS10870at 2184.708 kb on + strand, within A4249_RS10870at 2184.709 kb on - strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.813 kb on + strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2184.814 kb on - strand, within A4249_RS10870at 2185.143 kb on - strandat 2185.143 kb on - strandat 2185.152 kb on - strandat 2185.152 kb on - strandat 2185.175 kb on + strandat 2185.209 kb on + strandat 2185.210 kb on - strandat 2185.210 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,183,246 + A4249_RS10860 0.56 +0.1
2,183,247 - A4249_RS10860 0.56 -0.4
2,183,492 + A4249_RS10860 0.74 -0.6
2,183,492 + A4249_RS10860 0.74 -0.3
2,183,493 - A4249_RS10860 0.74 +0.2
2,183,493 - A4249_RS10860 0.74 -0.0
2,183,516 + A4249_RS10860 0.75 +0.5
2,183,516 + A4249_RS10860 0.75 +0.2
2,183,517 - A4249_RS10860 0.75 -0.2
2,183,517 - A4249_RS10860 0.75 -0.0
2,183,517 - A4249_RS10860 0.75 -0.8
2,183,517 - A4249_RS10860 0.75 -0.5
2,183,517 - A4249_RS10860 0.75 +0.2
2,183,517 - A4249_RS10860 0.75 -0.2
2,183,565 - A4249_RS10860 0.79 -1.7
2,183,565 - A4249_RS10860 0.79 -0.7
2,183,565 - A4249_RS10860 0.79 +1.1
2,183,580 + A4249_RS10860 0.80 -1.5
2,183,581 - A4249_RS10860 0.80 +0.4
2,183,642 + A4249_RS10860 0.84 -0.1
2,183,642 + A4249_RS10860 0.84 +0.1
2,183,642 + A4249_RS10860 0.84 +0.3
2,183,642 + A4249_RS10860 0.84 +1.7
2,183,642 + A4249_RS10860 0.84 +0.5
2,183,642 + A4249_RS10860 0.84 +0.3
2,183,642 + A4249_RS10860 0.84 +0.3
2,183,642 + A4249_RS10860 0.84 -0.7
2,183,642 + A4249_RS10860 0.84 +0.2
2,183,642 + A4249_RS10860 0.84 +0.1
2,183,642 + A4249_RS10860 0.84 +0.0
2,183,643 - A4249_RS10860 0.84 -1.2
2,183,643 - A4249_RS10860 0.84 +0.5
2,183,652 + A4249_RS10860 0.85 -0.1
2,183,652 + A4249_RS10860 0.85 -0.1
2,183,652 + A4249_RS10860 0.85 -0.0
2,183,652 + A4249_RS10860 0.85 -0.6
2,183,652 + A4249_RS10860 0.85 -0.3
2,183,652 + A4249_RS10860 0.85 +0.0
2,183,652 + A4249_RS10860 0.85 +0.1
2,183,653 - A4249_RS10860 0.85 -0.0
2,183,653 - A4249_RS10860 0.85 -0.3
2,183,653 - A4249_RS10860 0.85 +0.2
2,183,653 - A4249_RS10860 0.85 +0.1
2,183,653 - A4249_RS10860 0.85 -0.8
2,183,653 - A4249_RS10860 0.85 -0.8
2,183,653 - A4249_RS10860 0.85 -0.2
2,183,653 - A4249_RS10860 0.85 -1.7
2,184,087 - A4249_RS10865 0.55 +0.6
2,184,087 - A4249_RS10865 0.55 +1.5
2,184,215 + -1.4
2,184,215 + -0.3
2,184,215 + +0.2
2,184,215 + -0.6
2,184,215 + -0.1
2,184,216 - +1.1
2,184,216 - -0.1
2,184,216 - +0.0
2,184,216 - -0.7
2,184,216 - -0.3
2,184,223 - -0.2
2,184,223 - -0.1
2,184,302 + -1.5
2,184,303 - -0.3
2,184,303 - -0.3
2,184,392 + A4249_RS10870 0.19 -0.1
2,184,392 + A4249_RS10870 0.19 +0.4
2,184,392 + A4249_RS10870 0.19 +0.3
2,184,392 + A4249_RS10870 0.19 -1.0
2,184,392 + A4249_RS10870 0.19 -0.1
2,184,393 - A4249_RS10870 0.19 +0.4
2,184,393 - A4249_RS10870 0.19 +0.6
2,184,393 - A4249_RS10870 0.19 -0.7
2,184,393 - A4249_RS10870 0.19 -0.1
2,184,394 + A4249_RS10870 0.19 -0.2
2,184,394 + A4249_RS10870 0.19 -1.2
2,184,394 + A4249_RS10870 0.19 -0.3
2,184,394 + A4249_RS10870 0.19 -0.2
2,184,395 - A4249_RS10870 0.19 -0.6
2,184,395 - A4249_RS10870 0.19 +0.0
2,184,395 - A4249_RS10870 0.19 -0.2
2,184,395 - A4249_RS10870 0.19 +0.7
2,184,395 - A4249_RS10870 0.19 -0.0
2,184,395 - A4249_RS10870 0.19 -0.1
2,184,395 - A4249_RS10870 0.19 -2.3
2,184,432 + A4249_RS10870 0.23 -0.5
2,184,432 + A4249_RS10870 0.23 +0.2
2,184,433 - A4249_RS10870 0.23 +0.3
2,184,573 + A4249_RS10870 0.39 +0.4
2,184,708 + A4249_RS10870 0.53 +0.3
2,184,709 - A4249_RS10870 0.54 +0.6
2,184,813 + A4249_RS10870 0.65 +0.2
2,184,813 + A4249_RS10870 0.65 +0.3
2,184,813 + A4249_RS10870 0.65 -0.1
2,184,813 + A4249_RS10870 0.65 -0.1
2,184,813 + A4249_RS10870 0.65 +0.5
2,184,813 + A4249_RS10870 0.65 +0.4
2,184,813 + A4249_RS10870 0.65 -0.1
2,184,813 + A4249_RS10870 0.65 -0.0
2,184,814 - A4249_RS10870 0.65 +0.5
2,184,814 - A4249_RS10870 0.65 -0.3
2,184,814 - A4249_RS10870 0.65 -0.3
2,184,814 - A4249_RS10870 0.65 -0.7
2,184,814 - A4249_RS10870 0.65 +0.3
2,184,814 - A4249_RS10870 0.65 +0.2
2,184,814 - A4249_RS10870 0.65 +1.1
2,184,814 - A4249_RS10870 0.65 -0.2
2,185,143 - +1.3
2,185,143 - -0.0
2,185,152 - +0.7
2,185,152 - -0.1
2,185,175 + +0.3
2,185,209 + -0.2
2,185,210 - +0.3
2,185,210 - +0.8

Or see this region's nucleotide sequence