Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10855

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10845 and A4249_RS10850 overlap by 4 nucleotidesA4249_RS10850 and A4249_RS10855 are separated by 42 nucleotidesA4249_RS10855 and A4249_RS10860 are separated by 60 nucleotides A4249_RS10845: A4249_RS10845 - ABC transporter ATP-binding protein, at 2,179,576 to 2,180,508 _RS10845 A4249_RS10850: A4249_RS10850 - ABC transporter permease, at 2,180,505 to 2,181,272 _RS10850 A4249_RS10855: A4249_RS10855 - hypothetical protein, at 2,181,315 to 2,182,379 _RS10855 A4249_RS10860: A4249_RS10860 - metalloprotease TldD, at 2,182,440 to 2,183,870 _RS10860 Position (kb) 2181 2182 2183Strain fitness (log2 ratio) -2 -1 0 1at 2180.353 kb on + strand, within A4249_RS10845at 2180.353 kb on + strand, within A4249_RS10845at 2180.353 kb on + strand, within A4249_RS10845at 2180.354 kb on - strand, within A4249_RS10845at 2180.354 kb on - strand, within A4249_RS10845at 2180.521 kb on - strandat 2180.538 kb on + strandat 2180.538 kb on + strandat 2180.538 kb on + strandat 2180.538 kb on + strandat 2180.538 kb on + strandat 2180.539 kb on - strandat 2180.539 kb on - strandat 2180.539 kb on - strandat 2180.539 kb on - strandat 2180.539 kb on - strandat 2180.539 kb on - strandat 2180.603 kb on + strand, within A4249_RS10850at 2180.604 kb on - strand, within A4249_RS10850at 2180.604 kb on - strand, within A4249_RS10850at 2180.613 kb on + strand, within A4249_RS10850at 2180.613 kb on + strand, within A4249_RS10850at 2180.613 kb on + strand, within A4249_RS10850at 2180.614 kb on - strand, within A4249_RS10850at 2180.614 kb on - strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.751 kb on + strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.752 kb on - strand, within A4249_RS10850at 2180.778 kb on + strand, within A4249_RS10850at 2180.778 kb on + strand, within A4249_RS10850at 2180.778 kb on + strand, within A4249_RS10850at 2180.779 kb on - strand, within A4249_RS10850at 2180.826 kb on + strand, within A4249_RS10850at 2180.826 kb on + strand, within A4249_RS10850at 2180.826 kb on + strand, within A4249_RS10850at 2180.826 kb on + strand, within A4249_RS10850at 2180.826 kb on + strand, within A4249_RS10850at 2180.826 kb on + strand, within A4249_RS10850at 2180.827 kb on - strand, within A4249_RS10850at 2180.827 kb on - strand, within A4249_RS10850at 2180.827 kb on - strand, within A4249_RS10850at 2180.827 kb on - strand, within A4249_RS10850at 2180.827 kb on - strand, within A4249_RS10850at 2181.066 kb on + strand, within A4249_RS10850at 2181.066 kb on + strand, within A4249_RS10850at 2181.066 kb on + strand, within A4249_RS10850at 2181.066 kb on + strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.067 kb on - strand, within A4249_RS10850at 2181.126 kb on + strand, within A4249_RS10850at 2181.126 kb on + strand, within A4249_RS10850at 2181.127 kb on - strand, within A4249_RS10850at 2181.127 kb on - strand, within A4249_RS10850at 2181.127 kb on - strand, within A4249_RS10850at 2181.127 kb on - strand, within A4249_RS10850at 2181.127 kb on - strand, within A4249_RS10850at 2181.127 kb on - strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.156 kb on + strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.157 kb on - strand, within A4249_RS10850at 2181.377 kb on + strandat 2181.377 kb on + strandat 2181.377 kb on + strandat 2181.377 kb on + strandat 2181.377 kb on + strandat 2181.377 kb on + strandat 2181.377 kb on + strandat 2181.378 kb on - strandat 2181.378 kb on - strandat 2181.378 kb on - strandat 2181.378 kb on - strandat 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.885 kb on + strand, within A4249_RS10855at 2181.886 kb on - strand, within A4249_RS10855at 2181.886 kb on - strand, within A4249_RS10855at 2181.886 kb on - strand, within A4249_RS10855at 2181.886 kb on - strand, within A4249_RS10855at 2181.886 kb on - strand, within A4249_RS10855at 2181.886 kb on - strand, within A4249_RS10855at 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.432 kb on + strandat 2182.433 kb on - strandat 2182.433 kb on - strandat 2182.433 kb on - strandat 2182.433 kb on - strandat 2182.433 kb on - strandat 2182.433 kb on - strandat 2182.614 kb on + strand, within A4249_RS10860at 2182.615 kb on - strand, within A4249_RS10860at 2182.615 kb on - strand, within A4249_RS10860at 2182.668 kb on + strand, within A4249_RS10860at 2182.669 kb on - strand, within A4249_RS10860at 2182.791 kb on + strand, within A4249_RS10860at 2182.791 kb on + strand, within A4249_RS10860at 2182.792 kb on - strand, within A4249_RS10860at 2182.792 kb on - strand, within A4249_RS10860at 2182.792 kb on - strand, within A4249_RS10860at 2182.792 kb on - strand, within A4249_RS10860at 2183.246 kb on + strand, within A4249_RS10860at 2183.247 kb on - strand, within A4249_RS10860

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,180,353 + A4249_RS10845 0.83 +0.3
2,180,353 + A4249_RS10845 0.83 +1.1
2,180,353 + A4249_RS10845 0.83 +0.6
2,180,354 - A4249_RS10845 0.83 +0.2
2,180,354 - A4249_RS10845 0.83 -0.0
2,180,521 - -0.2
2,180,538 + -0.3
2,180,538 + -0.7
2,180,538 + +1.4
2,180,538 + -0.0
2,180,538 + -0.3
2,180,539 - +0.1
2,180,539 - -0.3
2,180,539 - +0.1
2,180,539 - +0.4
2,180,539 - -0.5
2,180,539 - -0.3
2,180,603 + A4249_RS10850 0.13 -0.1
2,180,604 - A4249_RS10850 0.13 -0.3
2,180,604 - A4249_RS10850 0.13 -0.4
2,180,613 + A4249_RS10850 0.14 -0.5
2,180,613 + A4249_RS10850 0.14 -0.4
2,180,613 + A4249_RS10850 0.14 +0.7
2,180,614 - A4249_RS10850 0.14 -0.0
2,180,614 - A4249_RS10850 0.14 +1.3
2,180,751 + A4249_RS10850 0.32 +0.1
2,180,751 + A4249_RS10850 0.32 -0.8
2,180,751 + A4249_RS10850 0.32 -1.0
2,180,751 + A4249_RS10850 0.32 +0.7
2,180,751 + A4249_RS10850 0.32 -0.0
2,180,751 + A4249_RS10850 0.32 -0.3
2,180,751 + A4249_RS10850 0.32 -0.7
2,180,751 + A4249_RS10850 0.32 -0.2
2,180,751 + A4249_RS10850 0.32 -1.0
2,180,751 + A4249_RS10850 0.32 -0.2
2,180,751 + A4249_RS10850 0.32 -0.2
2,180,752 - A4249_RS10850 0.32 +0.2
2,180,752 - A4249_RS10850 0.32 -1.5
2,180,752 - A4249_RS10850 0.32 -0.1
2,180,752 - A4249_RS10850 0.32 -0.5
2,180,752 - A4249_RS10850 0.32 +0.3
2,180,752 - A4249_RS10850 0.32 -0.3
2,180,752 - A4249_RS10850 0.32 -0.3
2,180,752 - A4249_RS10850 0.32 -0.0
2,180,752 - A4249_RS10850 0.32 -0.8
2,180,752 - A4249_RS10850 0.32 +0.3
2,180,752 - A4249_RS10850 0.32 +0.2
2,180,752 - A4249_RS10850 0.32 +0.5
2,180,752 - A4249_RS10850 0.32 +0.3
2,180,752 - A4249_RS10850 0.32 +0.2
2,180,778 + A4249_RS10850 0.36 +0.3
2,180,778 + A4249_RS10850 0.36 -0.6
2,180,778 + A4249_RS10850 0.36 +0.3
2,180,779 - A4249_RS10850 0.36 +0.6
2,180,826 + A4249_RS10850 0.42 -0.1
2,180,826 + A4249_RS10850 0.42 -0.4
2,180,826 + A4249_RS10850 0.42 -1.3
2,180,826 + A4249_RS10850 0.42 -0.2
2,180,826 + A4249_RS10850 0.42 +1.0
2,180,826 + A4249_RS10850 0.42 -2.7
2,180,827 - A4249_RS10850 0.42 -0.3
2,180,827 - A4249_RS10850 0.42 -0.0
2,180,827 - A4249_RS10850 0.42 -0.2
2,180,827 - A4249_RS10850 0.42 -0.5
2,180,827 - A4249_RS10850 0.42 -0.6
2,181,066 + A4249_RS10850 0.73 +0.1
2,181,066 + A4249_RS10850 0.73 -0.2
2,181,066 + A4249_RS10850 0.73 -0.0
2,181,066 + A4249_RS10850 0.73 -0.4
2,181,067 - A4249_RS10850 0.73 -2.3
2,181,067 - A4249_RS10850 0.73 +0.6
2,181,067 - A4249_RS10850 0.73 +0.1
2,181,067 - A4249_RS10850 0.73 +0.6
2,181,067 - A4249_RS10850 0.73 +0.2
2,181,067 - A4249_RS10850 0.73 -0.0
2,181,067 - A4249_RS10850 0.73 +0.3
2,181,126 + A4249_RS10850 0.81 +0.5
2,181,126 + A4249_RS10850 0.81 -2.2
2,181,127 - A4249_RS10850 0.81 -0.3
2,181,127 - A4249_RS10850 0.81 -0.0
2,181,127 - A4249_RS10850 0.81 -0.5
2,181,127 - A4249_RS10850 0.81 -0.5
2,181,127 - A4249_RS10850 0.81 -0.5
2,181,127 - A4249_RS10850 0.81 -0.2
2,181,156 + A4249_RS10850 0.85 +0.6
2,181,156 + A4249_RS10850 0.85 +0.5
2,181,156 + A4249_RS10850 0.85 -0.6
2,181,156 + A4249_RS10850 0.85 +0.3
2,181,156 + A4249_RS10850 0.85 -0.1
2,181,156 + A4249_RS10850 0.85 -0.2
2,181,156 + A4249_RS10850 0.85 +0.1
2,181,156 + A4249_RS10850 0.85 -0.0
2,181,156 + A4249_RS10850 0.85 -0.1
2,181,156 + A4249_RS10850 0.85 -0.6
2,181,156 + A4249_RS10850 0.85 +0.1
2,181,157 - A4249_RS10850 0.85 +0.2
2,181,157 - A4249_RS10850 0.85 +0.3
2,181,157 - A4249_RS10850 0.85 -0.1
2,181,157 - A4249_RS10850 0.85 -0.3
2,181,157 - A4249_RS10850 0.85 -0.4
2,181,157 - A4249_RS10850 0.85 -0.6
2,181,157 - A4249_RS10850 0.85 -0.1
2,181,157 - A4249_RS10850 0.85 +0.7
2,181,157 - A4249_RS10850 0.85 +0.2
2,181,377 + -0.3
2,181,377 + -0.1
2,181,377 + -0.0
2,181,377 + -0.0
2,181,377 + +0.5
2,181,377 + -0.0
2,181,377 + -0.1
2,181,378 - -0.0
2,181,378 - +1.1
2,181,378 - -0.0
2,181,378 - +0.2
2,181,885 + A4249_RS10855 0.54 +0.3
2,181,885 + A4249_RS10855 0.54 +0.1
2,181,885 + A4249_RS10855 0.54 -0.3
2,181,885 + A4249_RS10855 0.54 -0.7
2,181,885 + A4249_RS10855 0.54 +0.0
2,181,885 + A4249_RS10855 0.54 +0.5
2,181,885 + A4249_RS10855 0.54 +0.4
2,181,885 + A4249_RS10855 0.54 +0.2
2,181,885 + A4249_RS10855 0.54 -0.9
2,181,886 - A4249_RS10855 0.54 -0.2
2,181,886 - A4249_RS10855 0.54 -0.4
2,181,886 - A4249_RS10855 0.54 -0.2
2,181,886 - A4249_RS10855 0.54 +0.4
2,181,886 - A4249_RS10855 0.54 +0.4
2,181,886 - A4249_RS10855 0.54 +0.1
2,182,432 + +0.7
2,182,432 + +0.1
2,182,432 + +0.2
2,182,432 + -0.7
2,182,432 + -0.2
2,182,432 + +0.2
2,182,432 + -0.2
2,182,432 + -0.8
2,182,433 - -0.7
2,182,433 - +0.7
2,182,433 - -0.9
2,182,433 - +0.3
2,182,433 - -0.2
2,182,433 - -1.3
2,182,614 + A4249_RS10860 0.12 -0.3
2,182,615 - A4249_RS10860 0.12 +0.3
2,182,615 - A4249_RS10860 0.12 -1.2
2,182,668 + A4249_RS10860 0.16 +0.3
2,182,669 - A4249_RS10860 0.16 -0.4
2,182,791 + A4249_RS10860 0.25 -1.2
2,182,791 + A4249_RS10860 0.25 -1.5
2,182,792 - A4249_RS10860 0.25 +0.9
2,182,792 - A4249_RS10860 0.25 +1.3
2,182,792 - A4249_RS10860 0.25 -1.3
2,182,792 - A4249_RS10860 0.25 -0.8
2,183,246 + A4249_RS10860 0.56 +0.1
2,183,247 - A4249_RS10860 0.56 -0.4

Or see this region's nucleotide sequence