Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10845 and A4249_RS10850 overlap by 4 nucleotides A4249_RS10850 and A4249_RS10855 are separated by 42 nucleotides A4249_RS10855 and A4249_RS10860 are separated by 60 nucleotides
A4249_RS10845: A4249_RS10845 - ABC transporter ATP-binding protein, at 2,179,576 to 2,180,508
_RS10845
A4249_RS10850: A4249_RS10850 - ABC transporter permease, at 2,180,505 to 2,181,272
_RS10850
A4249_RS10855: A4249_RS10855 - hypothetical protein, at 2,181,315 to 2,182,379
_RS10855
A4249_RS10860: A4249_RS10860 - metalloprotease TldD, at 2,182,440 to 2,183,870
_RS10860
Position (kb)
2181
2182
2183 Strain fitness (log2 ratio)
-2
-1
0
1 at 2180.353 kb on + strand, within A4249_RS10845 at 2180.353 kb on + strand, within A4249_RS10845 at 2180.353 kb on + strand, within A4249_RS10845 at 2180.354 kb on - strand, within A4249_RS10845 at 2180.354 kb on - strand, within A4249_RS10845 at 2180.521 kb on - strand at 2180.538 kb on + strand at 2180.538 kb on + strand at 2180.538 kb on + strand at 2180.538 kb on + strand at 2180.538 kb on + strand at 2180.539 kb on - strand at 2180.539 kb on - strand at 2180.539 kb on - strand at 2180.539 kb on - strand at 2180.539 kb on - strand at 2180.539 kb on - strand at 2180.603 kb on + strand, within A4249_RS10850 at 2180.604 kb on - strand, within A4249_RS10850 at 2180.604 kb on - strand, within A4249_RS10850 at 2180.613 kb on + strand, within A4249_RS10850 at 2180.613 kb on + strand, within A4249_RS10850 at 2180.613 kb on + strand, within A4249_RS10850 at 2180.614 kb on - strand, within A4249_RS10850 at 2180.614 kb on - strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.751 kb on + strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.752 kb on - strand, within A4249_RS10850 at 2180.778 kb on + strand, within A4249_RS10850 at 2180.778 kb on + strand, within A4249_RS10850 at 2180.778 kb on + strand, within A4249_RS10850 at 2180.779 kb on - strand, within A4249_RS10850 at 2180.826 kb on + strand, within A4249_RS10850 at 2180.826 kb on + strand, within A4249_RS10850 at 2180.826 kb on + strand, within A4249_RS10850 at 2180.826 kb on + strand, within A4249_RS10850 at 2180.826 kb on + strand, within A4249_RS10850 at 2180.826 kb on + strand, within A4249_RS10850 at 2180.827 kb on - strand, within A4249_RS10850 at 2180.827 kb on - strand, within A4249_RS10850 at 2180.827 kb on - strand, within A4249_RS10850 at 2180.827 kb on - strand, within A4249_RS10850 at 2180.827 kb on - strand, within A4249_RS10850 at 2181.066 kb on + strand, within A4249_RS10850 at 2181.066 kb on + strand, within A4249_RS10850 at 2181.066 kb on + strand, within A4249_RS10850 at 2181.066 kb on + strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.067 kb on - strand, within A4249_RS10850 at 2181.126 kb on + strand, within A4249_RS10850 at 2181.126 kb on + strand, within A4249_RS10850 at 2181.127 kb on - strand, within A4249_RS10850 at 2181.127 kb on - strand, within A4249_RS10850 at 2181.127 kb on - strand, within A4249_RS10850 at 2181.127 kb on - strand, within A4249_RS10850 at 2181.127 kb on - strand, within A4249_RS10850 at 2181.127 kb on - strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.156 kb on + strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.157 kb on - strand, within A4249_RS10850 at 2181.377 kb on + strand at 2181.377 kb on + strand at 2181.377 kb on + strand at 2181.377 kb on + strand at 2181.377 kb on + strand at 2181.377 kb on + strand at 2181.377 kb on + strand at 2181.378 kb on - strand at 2181.378 kb on - strand at 2181.378 kb on - strand at 2181.378 kb on - strand at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.885 kb on + strand, within A4249_RS10855 at 2181.886 kb on - strand, within A4249_RS10855 at 2181.886 kb on - strand, within A4249_RS10855 at 2181.886 kb on - strand, within A4249_RS10855 at 2181.886 kb on - strand, within A4249_RS10855 at 2181.886 kb on - strand, within A4249_RS10855 at 2181.886 kb on - strand, within A4249_RS10855 at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.432 kb on + strand at 2182.433 kb on - strand at 2182.433 kb on - strand at 2182.433 kb on - strand at 2182.433 kb on - strand at 2182.433 kb on - strand at 2182.433 kb on - strand at 2182.614 kb on + strand, within A4249_RS10860 at 2182.615 kb on - strand, within A4249_RS10860 at 2182.615 kb on - strand, within A4249_RS10860 at 2182.668 kb on + strand, within A4249_RS10860 at 2182.669 kb on - strand, within A4249_RS10860 at 2182.791 kb on + strand, within A4249_RS10860 at 2182.791 kb on + strand, within A4249_RS10860 at 2182.792 kb on - strand, within A4249_RS10860 at 2182.792 kb on - strand, within A4249_RS10860 at 2182.792 kb on - strand, within A4249_RS10860 at 2182.792 kb on - strand, within A4249_RS10860 at 2183.246 kb on + strand, within A4249_RS10860 at 2183.247 kb on - strand, within A4249_RS10860
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,180,353 + A4249_RS10845 0.83 +0.3 2,180,353 + A4249_RS10845 0.83 +1.1 2,180,353 + A4249_RS10845 0.83 +0.6 2,180,354 - A4249_RS10845 0.83 +0.2 2,180,354 - A4249_RS10845 0.83 -0.0 2,180,521 - -0.2 2,180,538 + -0.3 2,180,538 + -0.7 2,180,538 + +1.4 2,180,538 + -0.0 2,180,538 + -0.3 2,180,539 - +0.1 2,180,539 - -0.3 2,180,539 - +0.1 2,180,539 - +0.4 2,180,539 - -0.5 2,180,539 - -0.3 2,180,603 + A4249_RS10850 0.13 -0.1 2,180,604 - A4249_RS10850 0.13 -0.3 2,180,604 - A4249_RS10850 0.13 -0.4 2,180,613 + A4249_RS10850 0.14 -0.5 2,180,613 + A4249_RS10850 0.14 -0.4 2,180,613 + A4249_RS10850 0.14 +0.7 2,180,614 - A4249_RS10850 0.14 -0.0 2,180,614 - A4249_RS10850 0.14 +1.3 2,180,751 + A4249_RS10850 0.32 +0.1 2,180,751 + A4249_RS10850 0.32 -0.8 2,180,751 + A4249_RS10850 0.32 -1.0 2,180,751 + A4249_RS10850 0.32 +0.7 2,180,751 + A4249_RS10850 0.32 -0.0 2,180,751 + A4249_RS10850 0.32 -0.3 2,180,751 + A4249_RS10850 0.32 -0.7 2,180,751 + A4249_RS10850 0.32 -0.2 2,180,751 + A4249_RS10850 0.32 -1.0 2,180,751 + A4249_RS10850 0.32 -0.2 2,180,751 + A4249_RS10850 0.32 -0.2 2,180,752 - A4249_RS10850 0.32 +0.2 2,180,752 - A4249_RS10850 0.32 -1.5 2,180,752 - A4249_RS10850 0.32 -0.1 2,180,752 - A4249_RS10850 0.32 -0.5 2,180,752 - A4249_RS10850 0.32 +0.3 2,180,752 - A4249_RS10850 0.32 -0.3 2,180,752 - A4249_RS10850 0.32 -0.3 2,180,752 - A4249_RS10850 0.32 -0.0 2,180,752 - A4249_RS10850 0.32 -0.8 2,180,752 - A4249_RS10850 0.32 +0.3 2,180,752 - A4249_RS10850 0.32 +0.2 2,180,752 - A4249_RS10850 0.32 +0.5 2,180,752 - A4249_RS10850 0.32 +0.3 2,180,752 - A4249_RS10850 0.32 +0.2 2,180,778 + A4249_RS10850 0.36 +0.3 2,180,778 + A4249_RS10850 0.36 -0.6 2,180,778 + A4249_RS10850 0.36 +0.3 2,180,779 - A4249_RS10850 0.36 +0.6 2,180,826 + A4249_RS10850 0.42 -0.1 2,180,826 + A4249_RS10850 0.42 -0.4 2,180,826 + A4249_RS10850 0.42 -1.3 2,180,826 + A4249_RS10850 0.42 -0.2 2,180,826 + A4249_RS10850 0.42 +1.0 2,180,826 + A4249_RS10850 0.42 -2.7 2,180,827 - A4249_RS10850 0.42 -0.3 2,180,827 - A4249_RS10850 0.42 -0.0 2,180,827 - A4249_RS10850 0.42 -0.2 2,180,827 - A4249_RS10850 0.42 -0.5 2,180,827 - A4249_RS10850 0.42 -0.6 2,181,066 + A4249_RS10850 0.73 +0.1 2,181,066 + A4249_RS10850 0.73 -0.2 2,181,066 + A4249_RS10850 0.73 -0.0 2,181,066 + A4249_RS10850 0.73 -0.4 2,181,067 - A4249_RS10850 0.73 -2.3 2,181,067 - A4249_RS10850 0.73 +0.6 2,181,067 - A4249_RS10850 0.73 +0.1 2,181,067 - A4249_RS10850 0.73 +0.6 2,181,067 - A4249_RS10850 0.73 +0.2 2,181,067 - A4249_RS10850 0.73 -0.0 2,181,067 - A4249_RS10850 0.73 +0.3 2,181,126 + A4249_RS10850 0.81 +0.5 2,181,126 + A4249_RS10850 0.81 -2.2 2,181,127 - A4249_RS10850 0.81 -0.3 2,181,127 - A4249_RS10850 0.81 -0.0 2,181,127 - A4249_RS10850 0.81 -0.5 2,181,127 - A4249_RS10850 0.81 -0.5 2,181,127 - A4249_RS10850 0.81 -0.5 2,181,127 - A4249_RS10850 0.81 -0.2 2,181,156 + A4249_RS10850 0.85 +0.6 2,181,156 + A4249_RS10850 0.85 +0.5 2,181,156 + A4249_RS10850 0.85 -0.6 2,181,156 + A4249_RS10850 0.85 +0.3 2,181,156 + A4249_RS10850 0.85 -0.1 2,181,156 + A4249_RS10850 0.85 -0.2 2,181,156 + A4249_RS10850 0.85 +0.1 2,181,156 + A4249_RS10850 0.85 -0.0 2,181,156 + A4249_RS10850 0.85 -0.1 2,181,156 + A4249_RS10850 0.85 -0.6 2,181,156 + A4249_RS10850 0.85 +0.1 2,181,157 - A4249_RS10850 0.85 +0.2 2,181,157 - A4249_RS10850 0.85 +0.3 2,181,157 - A4249_RS10850 0.85 -0.1 2,181,157 - A4249_RS10850 0.85 -0.3 2,181,157 - A4249_RS10850 0.85 -0.4 2,181,157 - A4249_RS10850 0.85 -0.6 2,181,157 - A4249_RS10850 0.85 -0.1 2,181,157 - A4249_RS10850 0.85 +0.7 2,181,157 - A4249_RS10850 0.85 +0.2 2,181,377 + -0.3 2,181,377 + -0.1 2,181,377 + -0.0 2,181,377 + -0.0 2,181,377 + +0.5 2,181,377 + -0.0 2,181,377 + -0.1 2,181,378 - -0.0 2,181,378 - +1.1 2,181,378 - -0.0 2,181,378 - +0.2 2,181,885 + A4249_RS10855 0.54 +0.3 2,181,885 + A4249_RS10855 0.54 +0.1 2,181,885 + A4249_RS10855 0.54 -0.3 2,181,885 + A4249_RS10855 0.54 -0.7 2,181,885 + A4249_RS10855 0.54 +0.0 2,181,885 + A4249_RS10855 0.54 +0.5 2,181,885 + A4249_RS10855 0.54 +0.4 2,181,885 + A4249_RS10855 0.54 +0.2 2,181,885 + A4249_RS10855 0.54 -0.9 2,181,886 - A4249_RS10855 0.54 -0.2 2,181,886 - A4249_RS10855 0.54 -0.4 2,181,886 - A4249_RS10855 0.54 -0.2 2,181,886 - A4249_RS10855 0.54 +0.4 2,181,886 - A4249_RS10855 0.54 +0.4 2,181,886 - A4249_RS10855 0.54 +0.1 2,182,432 + +0.7 2,182,432 + +0.1 2,182,432 + +0.2 2,182,432 + -0.7 2,182,432 + -0.2 2,182,432 + +0.2 2,182,432 + -0.2 2,182,432 + -0.8 2,182,433 - -0.7 2,182,433 - +0.7 2,182,433 - -0.9 2,182,433 - +0.3 2,182,433 - -0.2 2,182,433 - -1.3 2,182,614 + A4249_RS10860 0.12 -0.3 2,182,615 - A4249_RS10860 0.12 +0.3 2,182,615 - A4249_RS10860 0.12 -1.2 2,182,668 + A4249_RS10860 0.16 +0.3 2,182,669 - A4249_RS10860 0.16 -0.4 2,182,791 + A4249_RS10860 0.25 -1.2 2,182,791 + A4249_RS10860 0.25 -1.5 2,182,792 - A4249_RS10860 0.25 +0.9 2,182,792 - A4249_RS10860 0.25 +1.3 2,182,792 - A4249_RS10860 0.25 -1.3 2,182,792 - A4249_RS10860 0.25 -0.8 2,183,246 + A4249_RS10860 0.56 +0.1 2,183,247 - A4249_RS10860 0.56 -0.4
Or see this region's nucleotide sequence