Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10420

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10415 and A4249_RS10420 are separated by 164 nucleotidesA4249_RS10420 and A4249_RS10425 overlap by 4 nucleotidesA4249_RS10425 and A4249_RS10430 are separated by 5 nucleotides A4249_RS10415: A4249_RS10415 - Na+/H+ antiporter NhaA, at 2,093,991 to 2,095,235 _RS10415 A4249_RS10420: A4249_RS10420 - YnfA family protein, at 2,095,400 to 2,095,723 _RS10420 A4249_RS10425: A4249_RS10425 - RNA methyltransferase, at 2,095,720 to 2,096,511 _RS10425 A4249_RS10430: A4249_RS10430 - S1/P1 Nuclease, at 2,096,517 to 2,097,536 _RS10430 Position (kb) 2095 2096Strain fitness (log2 ratio) -1 0 1 2at 2095.364 kb on + strandat 2095.365 kb on - strandat 2095.365 kb on - strandat 2095.365 kb on - strandat 2095.365 kb on - strandat 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.536 kb on + strand, within A4249_RS10420at 2095.536 kb on + strand, within A4249_RS10420at 2095.537 kb on - strand, within A4249_RS10420at 2095.704 kb on + strandat 2095.705 kb on - strandat 2095.705 kb on - strandat 2095.705 kb on - strandat 2095.731 kb on + strandat 2095.731 kb on + strandat 2095.732 kb on - strandat 2095.732 kb on - strandat 2095.907 kb on + strand, within A4249_RS10425at 2095.908 kb on - strand, within A4249_RS10425at 2095.908 kb on - strand, within A4249_RS10425at 2095.908 kb on - strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.201 kb on + strand, within A4249_RS10425at 2096.201 kb on + strand, within A4249_RS10425at 2096.201 kb on + strand, within A4249_RS10425at 2096.202 kb on - strand, within A4249_RS10425at 2096.202 kb on - strand, within A4249_RS10425at 2096.202 kb on - strand, within A4249_RS10425at 2096.280 kb on - strand, within A4249_RS10425at 2096.407 kb on + strand, within A4249_RS10425at 2096.407 kb on + strand, within A4249_RS10425at 2096.407 kb on + strand, within A4249_RS10425at 2096.407 kb on + strand, within A4249_RS10425at 2096.408 kb on - strand, within A4249_RS10425

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,095,364 + +0.2
2,095,365 - +1.1
2,095,365 - -0.6
2,095,365 - -0.7
2,095,365 - -1.2
2,095,522 + A4249_RS10420 0.38 -0.2
2,095,522 + A4249_RS10420 0.38 -1.6
2,095,522 + A4249_RS10420 0.38 +0.1
2,095,522 + A4249_RS10420 0.38 -0.6
2,095,522 + A4249_RS10420 0.38 +0.7
2,095,522 + A4249_RS10420 0.38 +0.4
2,095,522 + A4249_RS10420 0.38 -0.1
2,095,523 - A4249_RS10420 0.38 +1.0
2,095,523 - A4249_RS10420 0.38 +0.2
2,095,523 - A4249_RS10420 0.38 +0.3
2,095,523 - A4249_RS10420 0.38 +0.7
2,095,523 - A4249_RS10420 0.38 +1.1
2,095,523 - A4249_RS10420 0.38 -0.8
2,095,523 - A4249_RS10420 0.38 +0.8
2,095,524 + A4249_RS10420 0.38 +0.4
2,095,524 + A4249_RS10420 0.38 -0.6
2,095,524 + A4249_RS10420 0.38 +0.2
2,095,524 + A4249_RS10420 0.38 +0.1
2,095,524 + A4249_RS10420 0.38 -0.2
2,095,524 + A4249_RS10420 0.38 +0.1
2,095,524 + A4249_RS10420 0.38 -0.2
2,095,524 + A4249_RS10420 0.38 -0.3
2,095,524 + A4249_RS10420 0.38 -0.4
2,095,524 + A4249_RS10420 0.38 +0.6
2,095,524 + A4249_RS10420 0.38 -0.1
2,095,525 - A4249_RS10420 0.39 +0.5
2,095,525 - A4249_RS10420 0.39 -0.1
2,095,525 - A4249_RS10420 0.39 +0.4
2,095,525 - A4249_RS10420 0.39 +2.0
2,095,525 - A4249_RS10420 0.39 +0.1
2,095,525 - A4249_RS10420 0.39 -0.2
2,095,525 - A4249_RS10420 0.39 +0.0
2,095,525 - A4249_RS10420 0.39 -0.2
2,095,525 - A4249_RS10420 0.39 -0.9
2,095,525 - A4249_RS10420 0.39 +0.5
2,095,536 + A4249_RS10420 0.42 +0.8
2,095,536 + A4249_RS10420 0.42 +0.3
2,095,537 - A4249_RS10420 0.42 +0.7
2,095,704 + -0.0
2,095,705 - +0.6
2,095,705 - -0.1
2,095,705 - -0.5
2,095,731 + +0.0
2,095,731 + -0.8
2,095,732 - +0.1
2,095,732 - -0.6
2,095,907 + A4249_RS10425 0.24 +0.8
2,095,908 - A4249_RS10425 0.24 +0.7
2,095,908 - A4249_RS10425 0.24 -1.0
2,095,908 - A4249_RS10425 0.24 +0.1
2,095,949 + A4249_RS10425 0.29 +0.8
2,095,949 + A4249_RS10425 0.29 -0.3
2,095,949 + A4249_RS10425 0.29 +0.4
2,095,949 + A4249_RS10425 0.29 -0.1
2,095,949 + A4249_RS10425 0.29 +0.1
2,095,949 + A4249_RS10425 0.29 +0.4
2,095,949 + A4249_RS10425 0.29 -0.7
2,095,949 + A4249_RS10425 0.29 -0.7
2,095,949 + A4249_RS10425 0.29 +0.3
2,095,949 + A4249_RS10425 0.29 -0.4
2,095,949 + A4249_RS10425 0.29 -0.4
2,095,950 - A4249_RS10425 0.29 +0.1
2,095,950 - A4249_RS10425 0.29 -0.4
2,095,950 - A4249_RS10425 0.29 +2.3
2,095,950 - A4249_RS10425 0.29 +0.4
2,095,950 - A4249_RS10425 0.29 -0.3
2,095,950 - A4249_RS10425 0.29 +0.8
2,095,950 - A4249_RS10425 0.29 +0.7
2,095,950 - A4249_RS10425 0.29 +1.4
2,095,950 - A4249_RS10425 0.29 +0.2
2,095,950 - A4249_RS10425 0.29 -1.7
2,095,950 - A4249_RS10425 0.29 +0.2
2,096,039 + A4249_RS10425 0.40 -0.9
2,096,039 + A4249_RS10425 0.40 +0.7
2,096,039 + A4249_RS10425 0.40 +1.0
2,096,039 + A4249_RS10425 0.40 +0.4
2,096,039 + A4249_RS10425 0.40 +0.1
2,096,039 + A4249_RS10425 0.40 +1.0
2,096,039 + A4249_RS10425 0.40 -0.0
2,096,039 + A4249_RS10425 0.40 -0.7
2,096,040 - A4249_RS10425 0.40 -0.1
2,096,040 - A4249_RS10425 0.40 +0.1
2,096,040 - A4249_RS10425 0.40 -0.5
2,096,040 - A4249_RS10425 0.40 +0.7
2,096,040 - A4249_RS10425 0.40 -0.3
2,096,040 - A4249_RS10425 0.40 +0.8
2,096,040 - A4249_RS10425 0.40 +1.1
2,096,201 + A4249_RS10425 0.61 +0.9
2,096,201 + A4249_RS10425 0.61 +1.4
2,096,201 + A4249_RS10425 0.61 +0.2
2,096,202 - A4249_RS10425 0.61 -1.4
2,096,202 - A4249_RS10425 0.61 +0.6
2,096,202 - A4249_RS10425 0.61 +0.0
2,096,280 - A4249_RS10425 0.71 +0.9
2,096,407 + A4249_RS10425 0.87 +0.8
2,096,407 + A4249_RS10425 0.87 -0.6
2,096,407 + A4249_RS10425 0.87 -0.5
2,096,407 + A4249_RS10425 0.87 -0.5
2,096,408 - A4249_RS10425 0.87 -0.2

Or see this region's nucleotide sequence