Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10185

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10180 and A4249_RS10185 overlap by 1 nucleotidesA4249_RS10185 and A4249_RS10190 are separated by 164 nucleotides A4249_RS10180: A4249_RS10180 - SGNH/GDSL hydrolase family protein, at 2,041,496 to 2,042,635 _RS10180 A4249_RS10185: A4249_RS10185 - hypothetical protein, at 2,042,635 to 2,042,922 _RS10185 A4249_RS10190: A4249_RS10190 - terminase family protein, at 2,043,087 to 2,044,256 _RS10190 Position (kb) 2042 2043Strain fitness (log2 ratio) -2 -1 0 1at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.686 kb on + strand, within A4249_RS10180at 2041.687 kb on - strand, within A4249_RS10180at 2041.687 kb on - strand, within A4249_RS10180at 2041.687 kb on - strand, within A4249_RS10180at 2041.788 kb on + strand, within A4249_RS10180at 2041.788 kb on + strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.789 kb on - strand, within A4249_RS10180at 2041.875 kb on + strand, within A4249_RS10180at 2042.143 kb on + strand, within A4249_RS10180at 2042.144 kb on - strand, within A4249_RS10180at 2042.298 kb on + strand, within A4249_RS10180at 2042.299 kb on - strand, within A4249_RS10180at 2042.299 kb on - strand, within A4249_RS10180at 2042.308 kb on - strand, within A4249_RS10180at 2042.455 kb on - strand, within A4249_RS10180at 2042.455 kb on - strand, within A4249_RS10180at 2042.775 kb on + strand, within A4249_RS10185at 2042.776 kb on - strand, within A4249_RS10185at 2042.795 kb on + strand, within A4249_RS10185at 2042.795 kb on + strand, within A4249_RS10185at 2042.795 kb on + strand, within A4249_RS10185at 2042.795 kb on + strand, within A4249_RS10185at 2042.795 kb on + strand, within A4249_RS10185at 2042.795 kb on + strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.796 kb on - strand, within A4249_RS10185at 2042.811 kb on - strand, within A4249_RS10185at 2042.811 kb on - strand, within A4249_RS10185at 2042.811 kb on - strand, within A4249_RS10185at 2042.922 kb on + strandat 2042.922 kb on + strandat 2042.934 kb on + strandat 2042.934 kb on + strandat 2042.934 kb on + strandat 2042.934 kb on + strandat 2042.934 kb on + strandat 2042.935 kb on - strandat 2042.935 kb on - strandat 2042.935 kb on - strandat 2042.935 kb on - strandat 2043.099 kb on + strandat 2043.099 kb on + strandat 2043.099 kb on + strandat 2043.099 kb on + strandat 2043.099 kb on + strandat 2043.099 kb on + strandat 2043.100 kb on - strandat 2043.256 kb on + strand, within A4249_RS10190at 2043.256 kb on + strand, within A4249_RS10190at 2043.256 kb on + strand, within A4249_RS10190at 2043.257 kb on - strand, within A4249_RS10190at 2043.257 kb on - strand, within A4249_RS10190at 2043.257 kb on - strand, within A4249_RS10190at 2043.257 kb on - strand, within A4249_RS10190at 2043.257 kb on - strand, within A4249_RS10190at 2043.257 kb on - strand, within A4249_RS10190at 2043.688 kb on + strand, within A4249_RS10190at 2043.688 kb on + strand, within A4249_RS10190at 2043.688 kb on + strand, within A4249_RS10190at 2043.689 kb on - strand, within A4249_RS10190at 2043.689 kb on - strand, within A4249_RS10190at 2043.689 kb on - strand, within A4249_RS10190at 2043.689 kb on - strand, within A4249_RS10190

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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2,041,686 + A4249_RS10180 0.17 -0.6
2,041,686 + A4249_RS10180 0.17 +0.3
2,041,686 + A4249_RS10180 0.17 +0.1
2,041,686 + A4249_RS10180 0.17 +0.3
2,041,686 + A4249_RS10180 0.17 +0.0
2,041,686 + A4249_RS10180 0.17 +0.4
2,041,686 + A4249_RS10180 0.17 -1.1
2,041,686 + A4249_RS10180 0.17 +0.7
2,041,686 + A4249_RS10180 0.17 -0.2
2,041,686 + A4249_RS10180 0.17 -0.3
2,041,686 + A4249_RS10180 0.17 -0.1
2,041,687 - A4249_RS10180 0.17 +0.3
2,041,687 - A4249_RS10180 0.17 -0.6
2,041,687 - A4249_RS10180 0.17 -0.4
2,041,788 + A4249_RS10180 0.26 +0.1
2,041,788 + A4249_RS10180 0.26 +0.7
2,041,789 - A4249_RS10180 0.26 +0.4
2,041,789 - A4249_RS10180 0.26 -1.2
2,041,789 - A4249_RS10180 0.26 -0.4
2,041,789 - A4249_RS10180 0.26 -0.8
2,041,789 - A4249_RS10180 0.26 +0.2
2,041,789 - A4249_RS10180 0.26 +0.9
2,041,789 - A4249_RS10180 0.26 +0.2
2,041,789 - A4249_RS10180 0.26 -0.8
2,041,789 - A4249_RS10180 0.26 -0.0
2,041,789 - A4249_RS10180 0.26 -0.7
2,041,875 + A4249_RS10180 0.33 -0.6
2,042,143 + A4249_RS10180 0.57 +0.1
2,042,144 - A4249_RS10180 0.57 -2.0
2,042,298 + A4249_RS10180 0.70 -0.1
2,042,299 - A4249_RS10180 0.70 +0.1
2,042,299 - A4249_RS10180 0.70 -0.7
2,042,308 - A4249_RS10180 0.71 +0.1
2,042,455 - A4249_RS10180 0.84 +0.7
2,042,455 - A4249_RS10180 0.84 +0.5
2,042,775 + A4249_RS10185 0.49 -0.3
2,042,776 - A4249_RS10185 0.49 -1.1
2,042,795 + A4249_RS10185 0.56 +0.1
2,042,795 + A4249_RS10185 0.56 -0.2
2,042,795 + A4249_RS10185 0.56 +0.3
2,042,795 + A4249_RS10185 0.56 -0.3
2,042,795 + A4249_RS10185 0.56 +0.1
2,042,795 + A4249_RS10185 0.56 +0.2
2,042,796 - A4249_RS10185 0.56 +0.2
2,042,796 - A4249_RS10185 0.56 -0.8
2,042,796 - A4249_RS10185 0.56 -0.4
2,042,796 - A4249_RS10185 0.56 +0.8
2,042,796 - A4249_RS10185 0.56 -0.3
2,042,796 - A4249_RS10185 0.56 +0.0
2,042,796 - A4249_RS10185 0.56 +0.5
2,042,796 - A4249_RS10185 0.56 +0.1
2,042,796 - A4249_RS10185 0.56 -0.1
2,042,796 - A4249_RS10185 0.56 -0.8
2,042,811 - A4249_RS10185 0.61 -1.0
2,042,811 - A4249_RS10185 0.61 -0.7
2,042,811 - A4249_RS10185 0.61 -0.2
2,042,922 + -1.3
2,042,922 + +0.3
2,042,934 + +0.1
2,042,934 + +1.2
2,042,934 + -0.7
2,042,934 + -0.2
2,042,934 + +0.7
2,042,935 - -0.2
2,042,935 - -0.7
2,042,935 - +0.3
2,042,935 - -0.1
2,043,099 + -0.4
2,043,099 + -0.2
2,043,099 + -0.3
2,043,099 + -0.7
2,043,099 + -0.4
2,043,099 + -0.6
2,043,100 - -0.2
2,043,256 + A4249_RS10190 0.14 +0.1
2,043,256 + A4249_RS10190 0.14 -1.9
2,043,256 + A4249_RS10190 0.14 +0.5
2,043,257 - A4249_RS10190 0.15 -0.6
2,043,257 - A4249_RS10190 0.15 -1.5
2,043,257 - A4249_RS10190 0.15 +0.1
2,043,257 - A4249_RS10190 0.15 -1.8
2,043,257 - A4249_RS10190 0.15 -0.0
2,043,257 - A4249_RS10190 0.15 -0.0
2,043,688 + A4249_RS10190 0.51 +0.2
2,043,688 + A4249_RS10190 0.51 -0.7
2,043,688 + A4249_RS10190 0.51 +0.7
2,043,689 - A4249_RS10190 0.51 -0.1
2,043,689 - A4249_RS10190 0.51 +0.5
2,043,689 - A4249_RS10190 0.51 +0.4
2,043,689 - A4249_RS10190 0.51 -0.1

Or see this region's nucleotide sequence