Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10100 and A4249_RS10105 are separated by 3 nucleotides A4249_RS10105 and A4249_RS10110 are separated by 97 nucleotides A4249_RS10110 and A4249_RS10115 are separated by 53 nucleotides A4249_RS10115 and A4249_RS16335 overlap by 11 nucleotides A4249_RS16335 and A4249_RS10120 overlap by 4 nucleotides
A4249_RS10100: A4249_RS10100 - DUF2163 domain-containing protein, at 2,030,907 to 2,031,554
_RS10100
A4249_RS10105: A4249_RS10105 - DUF2460 domain-containing protein, at 2,031,558 to 2,032,169
_RS10105
A4249_RS10110: A4249_RS10110 - DUF805 domain-containing protein, at 2,032,267 to 2,032,968
_RS10110
A4249_RS10115: A4249_RS10115 - phage tail tape measure protein, at 2,033,022 to 2,033,546
_RS10115
A4249_RS16335: A4249_RS16335 - phage tail assembly chaperone, at 2,033,536 to 2,033,712
_RS16335
A4249_RS10120: A4249_RS10120 - GTA-gp10 family protein, at 2,033,709 to 2,033,987
_RS10120
Position (kb)
2032
2033 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2031.308 kb on + strand, within A4249_RS10100 at 2031.544 kb on - strand at 2031.824 kb on - strand, within A4249_RS10105 at 2031.949 kb on + strand, within A4249_RS10105 at 2032.288 kb on + strand at 2032.796 kb on - strand, within A4249_RS10110 at 2032.807 kb on + strand, within A4249_RS10110 at 2032.808 kb on - strand, within A4249_RS10110 at 2032.810 kb on + strand, within A4249_RS10110 at 2032.810 kb on + strand, within A4249_RS10110 at 2032.810 kb on + strand, within A4249_RS10110 at 2032.811 kb on - strand, within A4249_RS10110 at 2032.966 kb on + strand at 2032.966 kb on + strand at 2032.967 kb on - strand at 2032.967 kb on - strand at 2032.967 kb on - strand at 2033.209 kb on + strand, within A4249_RS10115 at 2033.209 kb on + strand, within A4249_RS10115 at 2033.210 kb on - strand, within A4249_RS10115 at 2033.389 kb on - strand, within A4249_RS10115
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 2,031,308 + A4249_RS10100 0.62 -0.1 2,031,544 - +0.7 2,031,824 - A4249_RS10105 0.43 +0.4 2,031,949 + A4249_RS10105 0.64 +0.4 2,032,288 + +0.8 2,032,796 - A4249_RS10110 0.75 +0.2 2,032,807 + A4249_RS10110 0.77 -1.3 2,032,808 - A4249_RS10110 0.77 -0.0 2,032,810 + A4249_RS10110 0.77 +0.7 2,032,810 + A4249_RS10110 0.77 -1.1 2,032,810 + A4249_RS10110 0.77 -0.5 2,032,811 - A4249_RS10110 0.77 -2.9 2,032,966 + -0.0 2,032,966 + -0.3 2,032,967 - -0.1 2,032,967 - -1.7 2,032,967 - -0.5 2,033,209 + A4249_RS10115 0.36 -1.0 2,033,209 + A4249_RS10115 0.36 -0.3 2,033,210 - A4249_RS10115 0.36 +0.9 2,033,389 - A4249_RS10115 0.70 -0.2
Or see this region's nucleotide sequence