Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09395 and A4249_RS09400 overlap by 4 nucleotides A4249_RS09400 and A4249_RS09405 are separated by 6 nucleotides A4249_RS09405 and A4249_RS09410 overlap by 4 nucleotides A4249_RS09410 and A4249_RS09415 are separated by 76 nucleotides
A4249_RS09395: A4249_RS09395 - SMC-Scp complex subunit ScpB, at 1,878,236 to 1,878,916
_RS09395
A4249_RS09400: A4249_RS09400 - ScpA family protein, at 1,878,913 to 1,879,731
_RS09400
A4249_RS09405: A4249_RS09405 - beta-N-acetylhexosaminidase, at 1,879,738 to 1,880,787
_RS09405
A4249_RS09410: A4249_RS09410 - SPOR domain-containing protein, at 1,880,784 to 1,881,560
_RS09410
A4249_RS09415: A4249_RS09415 - deoxyguanosinetriphosphate triphosphohydrolase, at 1,881,637 to 1,882,827
_RS09415
Position (kb)
1879
1880
1881 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1878.756 kb on + strand, within A4249_RS09395 at 1878.757 kb on - strand, within A4249_RS09395 at 1878.757 kb on - strand, within A4249_RS09395 at 1878.757 kb on - strand, within A4249_RS09395 at 1878.757 kb on - strand, within A4249_RS09395 at 1878.959 kb on + strand at 1878.959 kb on + strand at 1878.959 kb on + strand at 1878.959 kb on + strand at 1878.959 kb on + strand at 1879.044 kb on + strand, within A4249_RS09400 at 1879.044 kb on + strand, within A4249_RS09400 at 1879.229 kb on + strand, within A4249_RS09400 at 1879.230 kb on - strand, within A4249_RS09400 at 1879.230 kb on - strand, within A4249_RS09400 at 1879.230 kb on - strand, within A4249_RS09400 at 1879.230 kb on - strand, within A4249_RS09400 at 1879.230 kb on - strand, within A4249_RS09400 at 1879.247 kb on + strand, within A4249_RS09400 at 1879.248 kb on - strand, within A4249_RS09400 at 1879.248 kb on - strand, within A4249_RS09400 at 1879.248 kb on - strand, within A4249_RS09400 at 1879.248 kb on - strand, within A4249_RS09400 at 1879.381 kb on + strand, within A4249_RS09400 at 1879.475 kb on + strand, within A4249_RS09400 at 1879.475 kb on + strand, within A4249_RS09400 at 1879.475 kb on + strand, within A4249_RS09400 at 1879.476 kb on - strand, within A4249_RS09400 at 1879.502 kb on + strand, within A4249_RS09400 at 1879.503 kb on - strand, within A4249_RS09400 at 1879.556 kb on + strand, within A4249_RS09400 at 1879.556 kb on + strand, within A4249_RS09400 at 1879.556 kb on + strand, within A4249_RS09400 at 1879.556 kb on + strand, within A4249_RS09400 at 1879.556 kb on + strand, within A4249_RS09400 at 1879.556 kb on + strand, within A4249_RS09400 at 1879.557 kb on - strand, within A4249_RS09400 at 1879.557 kb on - strand, within A4249_RS09400 at 1879.557 kb on - strand, within A4249_RS09400 at 1879.557 kb on - strand, within A4249_RS09400 at 1879.646 kb on + strand, within A4249_RS09400 at 1879.647 kb on - strand, within A4249_RS09400 at 1879.647 kb on - strand, within A4249_RS09400 at 1879.731 kb on + strand at 1879.731 kb on + strand at 1879.731 kb on + strand at 1879.731 kb on + strand at 1879.731 kb on + strand at 1879.731 kb on + strand at 1879.731 kb on + strand at 1879.732 kb on - strand at 1879.732 kb on - strand at 1879.732 kb on - strand at 1879.732 kb on - strand at 1879.732 kb on - strand at 1879.739 kb on + strand at 1879.739 kb on + strand at 1879.739 kb on + strand at 1879.739 kb on + strand at 1879.739 kb on + strand at 1879.740 kb on - strand at 1879.740 kb on - strand at 1879.740 kb on - strand at 1879.740 kb on - strand at 1880.116 kb on - strand, within A4249_RS09405 at 1880.277 kb on + strand, within A4249_RS09405 at 1880.277 kb on + strand, within A4249_RS09405 at 1880.277 kb on + strand, within A4249_RS09405 at 1880.277 kb on + strand, within A4249_RS09405 at 1880.278 kb on - strand, within A4249_RS09405 at 1880.407 kb on + strand, within A4249_RS09405 at 1880.407 kb on + strand, within A4249_RS09405 at 1880.768 kb on + strand at 1880.768 kb on + strand at 1880.769 kb on - strand at 1880.769 kb on - strand at 1880.769 kb on - strand at 1880.769 kb on - strand at 1880.769 kb on - strand at 1880.769 kb on - strand at 1880.965 kb on + strand, within A4249_RS09410 at 1881.114 kb on - strand, within A4249_RS09410 at 1881.519 kb on - strand at 1881.612 kb on + strand at 1881.612 kb on + strand at 1881.612 kb on + strand at 1881.612 kb on + strand at 1881.613 kb on - strand at 1881.613 kb on - strand at 1881.613 kb on - strand at 1881.685 kb on + strand at 1881.685 kb on + strand at 1881.685 kb on + strand at 1881.685 kb on + strand at 1881.686 kb on - strand at 1881.686 kb on - strand at 1881.686 kb on - strand at 1881.692 kb on + strand at 1881.693 kb on - strand at 1881.716 kb on + strand at 1881.716 kb on + strand at 1881.716 kb on + strand at 1881.716 kb on + strand at 1881.717 kb on - strand at 1881.717 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,878,756 + A4249_RS09395 0.76 +0.1 1,878,757 - A4249_RS09395 0.77 -0.3 1,878,757 - A4249_RS09395 0.77 -0.9 1,878,757 - A4249_RS09395 0.77 -0.6 1,878,757 - A4249_RS09395 0.77 +2.0 1,878,959 + +0.4 1,878,959 + -1.0 1,878,959 + +1.2 1,878,959 + -0.4 1,878,959 + -0.7 1,879,044 + A4249_RS09400 0.16 -0.1 1,879,044 + A4249_RS09400 0.16 -0.5 1,879,229 + A4249_RS09400 0.39 +0.1 1,879,230 - A4249_RS09400 0.39 +0.8 1,879,230 - A4249_RS09400 0.39 +0.4 1,879,230 - A4249_RS09400 0.39 +0.1 1,879,230 - A4249_RS09400 0.39 -0.2 1,879,230 - A4249_RS09400 0.39 -0.2 1,879,247 + A4249_RS09400 0.41 +0.2 1,879,248 - A4249_RS09400 0.41 -0.5 1,879,248 - A4249_RS09400 0.41 -0.4 1,879,248 - A4249_RS09400 0.41 -0.5 1,879,248 - A4249_RS09400 0.41 -0.4 1,879,381 + A4249_RS09400 0.57 -1.2 1,879,475 + A4249_RS09400 0.69 +2.0 1,879,475 + A4249_RS09400 0.69 +0.9 1,879,475 + A4249_RS09400 0.69 +0.2 1,879,476 - A4249_RS09400 0.69 +0.3 1,879,502 + A4249_RS09400 0.72 -1.3 1,879,503 - A4249_RS09400 0.72 -0.0 1,879,556 + A4249_RS09400 0.79 +0.3 1,879,556 + A4249_RS09400 0.79 +1.1 1,879,556 + A4249_RS09400 0.79 -0.7 1,879,556 + A4249_RS09400 0.79 -0.1 1,879,556 + A4249_RS09400 0.79 +0.1 1,879,556 + A4249_RS09400 0.79 -1.2 1,879,557 - A4249_RS09400 0.79 -0.2 1,879,557 - A4249_RS09400 0.79 -0.1 1,879,557 - A4249_RS09400 0.79 -1.1 1,879,557 - A4249_RS09400 0.79 +0.2 1,879,646 + A4249_RS09400 0.89 -1.1 1,879,647 - A4249_RS09400 0.90 +0.7 1,879,647 - A4249_RS09400 0.90 -0.3 1,879,731 + -0.5 1,879,731 + +1.0 1,879,731 + +0.0 1,879,731 + +0.4 1,879,731 + -0.3 1,879,731 + +0.8 1,879,731 + +0.5 1,879,732 - -0.4 1,879,732 - +0.3 1,879,732 - -0.4 1,879,732 - -0.0 1,879,732 - -0.2 1,879,739 + +0.1 1,879,739 + -0.1 1,879,739 + +0.1 1,879,739 + -1.4 1,879,739 + -0.7 1,879,740 - +0.2 1,879,740 - +0.1 1,879,740 - +1.6 1,879,740 - -1.7 1,880,116 - A4249_RS09405 0.36 +0.9 1,880,277 + A4249_RS09405 0.51 +0.4 1,880,277 + A4249_RS09405 0.51 -1.0 1,880,277 + A4249_RS09405 0.51 -0.7 1,880,277 + A4249_RS09405 0.51 +0.9 1,880,278 - A4249_RS09405 0.51 -1.2 1,880,407 + A4249_RS09405 0.64 +1.2 1,880,407 + A4249_RS09405 0.64 -1.1 1,880,768 + -0.9 1,880,768 + +0.4 1,880,769 - +0.3 1,880,769 - -0.5 1,880,769 - +1.0 1,880,769 - -1.1 1,880,769 - -0.7 1,880,769 - +0.7 1,880,965 + A4249_RS09410 0.23 -0.8 1,881,114 - A4249_RS09410 0.42 +1.1 1,881,519 - +0.9 1,881,612 + +0.3 1,881,612 + +0.5 1,881,612 + -0.9 1,881,612 + +0.3 1,881,613 - +0.8 1,881,613 - -1.5 1,881,613 - +0.1 1,881,685 + -0.7 1,881,685 + -0.3 1,881,685 + +0.2 1,881,685 + +0.5 1,881,686 - -0.7 1,881,686 - -1.8 1,881,686 - -0.6 1,881,692 + +3.1 1,881,693 - +0.8 1,881,716 + -0.9 1,881,716 + -0.5 1,881,716 + +0.3 1,881,716 + -1.1 1,881,717 - +0.6 1,881,717 - +0.8
Or see this region's nucleotide sequence