Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09305 and A4249_RS09310 are separated by 7 nucleotides A4249_RS09310 and A4249_RS09315 overlap by 1 nucleotides A4249_RS09315 and A4249_RS09320 are separated by 135 nucleotides
A4249_RS09305: A4249_RS09305 - type VI secretion protein ImpB, at 1,861,546 to 1,862,835
_RS09305
A4249_RS09310: A4249_RS09310 - bifunctional nicotinamidase/pyrazinamidase, at 1,862,843 to 1,863,463
_RS09310
A4249_RS09315: A4249_RS09315 - class 1 fructose-bisphosphatase, at 1,863,463 to 1,864,428
_RS09315
A4249_RS09320: A4249_RS09320 - alpha/beta hydrolase, at 1,864,564 to 1,865,601
_RS09320
Position (kb)
1863
1864
1865 Strain fitness (log2 ratio)
-1
0
1
2 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.593 kb on + strand, within A4249_RS09305 at 1862.594 kb on - strand, within A4249_RS09305 at 1862.594 kb on - strand, within A4249_RS09305 at 1862.594 kb on - strand, within A4249_RS09305 at 1862.594 kb on - strand, within A4249_RS09305 at 1862.594 kb on - strand, within A4249_RS09305 at 1862.594 kb on - strand, within A4249_RS09305 at 1862.776 kb on + strand at 1862.776 kb on + strand at 1862.776 kb on + strand at 1862.776 kb on + strand at 1862.777 kb on - strand at 1862.777 kb on - strand at 1862.777 kb on - strand at 1862.777 kb on - strand at 1862.777 kb on - strand at 1862.778 kb on + strand at 1862.779 kb on - strand at 1862.779 kb on - strand at 1862.779 kb on - strand at 1862.844 kb on + strand at 1862.844 kb on + strand at 1862.844 kb on + strand at 1862.845 kb on - strand at 1862.845 kb on - strand at 1862.845 kb on - strand at 1862.845 kb on - strand at 1862.845 kb on - strand at 1862.845 kb on - strand at 1862.845 kb on - strand at 1863.006 kb on + strand, within A4249_RS09310 at 1863.006 kb on + strand, within A4249_RS09310 at 1863.006 kb on + strand, within A4249_RS09310 at 1863.007 kb on - strand, within A4249_RS09310 at 1863.111 kb on + strand, within A4249_RS09310 at 1863.111 kb on + strand, within A4249_RS09310 at 1863.111 kb on + strand, within A4249_RS09310 at 1863.111 kb on + strand, within A4249_RS09310 at 1863.111 kb on + strand, within A4249_RS09310 at 1863.112 kb on - strand, within A4249_RS09310 at 1863.112 kb on - strand, within A4249_RS09310 at 1863.130 kb on + strand, within A4249_RS09310 at 1863.130 kb on + strand, within A4249_RS09310 at 1863.130 kb on + strand, within A4249_RS09310 at 1863.130 kb on + strand, within A4249_RS09310 at 1863.130 kb on + strand, within A4249_RS09310 at 1863.130 kb on + strand, within A4249_RS09310 at 1863.131 kb on - strand, within A4249_RS09310 at 1863.131 kb on - strand, within A4249_RS09310 at 1863.131 kb on - strand, within A4249_RS09310 at 1863.131 kb on - strand, within A4249_RS09310 at 1863.131 kb on - strand, within A4249_RS09310 at 1863.132 kb on + strand, within A4249_RS09310 at 1863.132 kb on + strand, within A4249_RS09310 at 1863.132 kb on + strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.133 kb on - strand, within A4249_RS09310 at 1863.246 kb on + strand, within A4249_RS09310 at 1863.246 kb on + strand, within A4249_RS09310 at 1863.247 kb on - strand, within A4249_RS09310 at 1863.623 kb on + strand, within A4249_RS09315 at 1863.624 kb on - strand, within A4249_RS09315 at 1863.624 kb on - strand, within A4249_RS09315 at 1863.624 kb on - strand, within A4249_RS09315 at 1863.624 kb on - strand, within A4249_RS09315 at 1863.624 kb on - strand, within A4249_RS09315 at 1863.675 kb on - strand, within A4249_RS09315 at 1863.702 kb on + strand, within A4249_RS09315 at 1863.702 kb on + strand, within A4249_RS09315 at 1863.794 kb on + strand, within A4249_RS09315 at 1863.794 kb on + strand, within A4249_RS09315 at 1863.795 kb on - strand, within A4249_RS09315 at 1863.795 kb on - strand, within A4249_RS09315 at 1863.968 kb on + strand, within A4249_RS09315 at 1863.969 kb on - strand, within A4249_RS09315 at 1863.978 kb on - strand, within A4249_RS09315 at 1863.978 kb on - strand, within A4249_RS09315 at 1863.978 kb on - strand, within A4249_RS09315 at 1864.542 kb on + strand at 1864.542 kb on + strand at 1864.543 kb on - strand at 1864.543 kb on - strand at 1864.822 kb on - strand, within A4249_RS09320 at 1864.925 kb on + strand, within A4249_RS09320 at 1864.925 kb on + strand, within A4249_RS09320 at 1864.926 kb on - strand, within A4249_RS09320 at 1864.926 kb on - strand, within A4249_RS09320 at 1865.114 kb on + strand, within A4249_RS09320 at 1865.114 kb on + strand, within A4249_RS09320 at 1865.115 kb on - strand, within A4249_RS09320 at 1865.115 kb on - strand, within A4249_RS09320 at 1865.231 kb on + strand, within A4249_RS09320 at 1865.232 kb on - strand, within A4249_RS09320 at 1865.321 kb on + strand, within A4249_RS09320 at 1865.321 kb on + strand, within A4249_RS09320 at 1865.322 kb on - strand, within A4249_RS09320 at 1865.322 kb on - strand, within A4249_RS09320 at 1865.322 kb on - strand, within A4249_RS09320 at 1865.322 kb on - strand, within A4249_RS09320 at 1865.322 kb on - strand, within A4249_RS09320 at 1865.358 kb on + strand, within A4249_RS09320 at 1865.358 kb on + strand, within A4249_RS09320 at 1865.358 kb on + strand, within A4249_RS09320 at 1865.358 kb on + strand, within A4249_RS09320 at 1865.358 kb on + strand, within A4249_RS09320 at 1865.359 kb on - strand, within A4249_RS09320 at 1865.359 kb on - strand, within A4249_RS09320 at 1865.359 kb on - strand, within A4249_RS09320 at 1865.359 kb on - strand, within A4249_RS09320 at 1865.359 kb on - strand, within A4249_RS09320 at 1865.359 kb on - strand, within A4249_RS09320
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,862,593 + A4249_RS09305 0.81 -0.6 1,862,593 + A4249_RS09305 0.81 +0.7 1,862,593 + A4249_RS09305 0.81 -0.4 1,862,593 + A4249_RS09305 0.81 +0.4 1,862,593 + A4249_RS09305 0.81 -0.3 1,862,593 + A4249_RS09305 0.81 -0.3 1,862,593 + A4249_RS09305 0.81 +0.5 1,862,593 + A4249_RS09305 0.81 -0.4 1,862,593 + A4249_RS09305 0.81 +0.3 1,862,594 - A4249_RS09305 0.81 +0.6 1,862,594 - A4249_RS09305 0.81 +0.0 1,862,594 - A4249_RS09305 0.81 -0.1 1,862,594 - A4249_RS09305 0.81 +0.5 1,862,594 - A4249_RS09305 0.81 +0.4 1,862,594 - A4249_RS09305 0.81 +0.5 1,862,776 + +0.1 1,862,776 + +0.2 1,862,776 + -0.2 1,862,776 + +0.3 1,862,777 - -0.1 1,862,777 - +0.6 1,862,777 - +0.3 1,862,777 - -0.2 1,862,777 - +0.2 1,862,778 + +0.1 1,862,779 - -0.1 1,862,779 - +0.4 1,862,779 - +0.2 1,862,844 + -0.1 1,862,844 + -0.7 1,862,844 + +0.4 1,862,845 - -0.2 1,862,845 - -0.1 1,862,845 - +0.2 1,862,845 - -1.3 1,862,845 - +0.0 1,862,845 - -0.7 1,862,845 - +0.1 1,863,006 + A4249_RS09310 0.26 -0.1 1,863,006 + A4249_RS09310 0.26 +0.4 1,863,006 + A4249_RS09310 0.26 +0.2 1,863,007 - A4249_RS09310 0.26 -0.0 1,863,111 + A4249_RS09310 0.43 +0.4 1,863,111 + A4249_RS09310 0.43 +0.1 1,863,111 + A4249_RS09310 0.43 -0.4 1,863,111 + A4249_RS09310 0.43 -0.2 1,863,111 + A4249_RS09310 0.43 -0.5 1,863,112 - A4249_RS09310 0.43 +0.2 1,863,112 - A4249_RS09310 0.43 -0.1 1,863,130 + A4249_RS09310 0.46 +0.1 1,863,130 + A4249_RS09310 0.46 +0.4 1,863,130 + A4249_RS09310 0.46 +0.1 1,863,130 + A4249_RS09310 0.46 +0.0 1,863,130 + A4249_RS09310 0.46 -0.2 1,863,130 + A4249_RS09310 0.46 -0.2 1,863,131 - A4249_RS09310 0.46 +0.1 1,863,131 - A4249_RS09310 0.46 +0.2 1,863,131 - A4249_RS09310 0.46 -0.3 1,863,131 - A4249_RS09310 0.46 -0.0 1,863,131 - A4249_RS09310 0.46 -0.2 1,863,132 + A4249_RS09310 0.47 +0.4 1,863,132 + A4249_RS09310 0.47 -1.7 1,863,132 + A4249_RS09310 0.47 +0.6 1,863,133 - A4249_RS09310 0.47 -0.3 1,863,133 - A4249_RS09310 0.47 +0.4 1,863,133 - A4249_RS09310 0.47 -0.1 1,863,133 - A4249_RS09310 0.47 -0.4 1,863,133 - A4249_RS09310 0.47 +0.8 1,863,133 - A4249_RS09310 0.47 -0.9 1,863,133 - A4249_RS09310 0.47 -0.4 1,863,133 - A4249_RS09310 0.47 -0.0 1,863,133 - A4249_RS09310 0.47 -0.2 1,863,246 + A4249_RS09310 0.65 +0.1 1,863,246 + A4249_RS09310 0.65 -0.5 1,863,247 - A4249_RS09310 0.65 -0.3 1,863,623 + A4249_RS09315 0.17 -0.6 1,863,624 - A4249_RS09315 0.17 +0.7 1,863,624 - A4249_RS09315 0.17 -0.7 1,863,624 - A4249_RS09315 0.17 +0.7 1,863,624 - A4249_RS09315 0.17 -0.3 1,863,624 - A4249_RS09315 0.17 +1.3 1,863,675 - A4249_RS09315 0.22 +0.4 1,863,702 + A4249_RS09315 0.25 +0.7 1,863,702 + A4249_RS09315 0.25 +1.1 1,863,794 + A4249_RS09315 0.34 +0.4 1,863,794 + A4249_RS09315 0.34 +1.2 1,863,795 - A4249_RS09315 0.34 +0.2 1,863,795 - A4249_RS09315 0.34 +2.2 1,863,968 + A4249_RS09315 0.52 -0.1 1,863,969 - A4249_RS09315 0.52 +0.3 1,863,978 - A4249_RS09315 0.53 -0.3 1,863,978 - A4249_RS09315 0.53 -1.4 1,863,978 - A4249_RS09315 0.53 -1.1 1,864,542 + +0.7 1,864,542 + -0.8 1,864,543 - +0.5 1,864,543 - +0.0 1,864,822 - A4249_RS09320 0.25 +0.2 1,864,925 + A4249_RS09320 0.35 +0.7 1,864,925 + A4249_RS09320 0.35 -0.1 1,864,926 - A4249_RS09320 0.35 -0.8 1,864,926 - A4249_RS09320 0.35 -0.2 1,865,114 + A4249_RS09320 0.53 -1.5 1,865,114 + A4249_RS09320 0.53 +0.1 1,865,115 - A4249_RS09320 0.53 -0.3 1,865,115 - A4249_RS09320 0.53 +0.1 1,865,231 + A4249_RS09320 0.64 +0.8 1,865,232 - A4249_RS09320 0.64 -0.7 1,865,321 + A4249_RS09320 0.73 +0.7 1,865,321 + A4249_RS09320 0.73 +0.9 1,865,322 - A4249_RS09320 0.73 -0.4 1,865,322 - A4249_RS09320 0.73 -0.4 1,865,322 - A4249_RS09320 0.73 +0.3 1,865,322 - A4249_RS09320 0.73 -0.0 1,865,322 - A4249_RS09320 0.73 -0.6 1,865,358 + A4249_RS09320 0.76 -0.2 1,865,358 + A4249_RS09320 0.76 -0.4 1,865,358 + A4249_RS09320 0.76 -0.3 1,865,358 + A4249_RS09320 0.76 +0.2 1,865,358 + A4249_RS09320 0.76 +0.2 1,865,359 - A4249_RS09320 0.77 -0.7 1,865,359 - A4249_RS09320 0.77 +0.8 1,865,359 - A4249_RS09320 0.77 +0.6 1,865,359 - A4249_RS09320 0.77 +0.7 1,865,359 - A4249_RS09320 0.77 +0.1 1,865,359 - A4249_RS09320 0.77 -0.4
Or see this region's nucleotide sequence