Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09290 and A4249_RS09295 are separated by 36 nucleotides A4249_RS09295 and A4249_RS09300 overlap by 4 nucleotides A4249_RS09300 and A4249_RS09305 are separated by 65 nucleotides
A4249_RS09290: A4249_RS09290 - arginine--tRNA ligase, at 1,858,317 to 1,860,119
_RS09290
A4249_RS09295: A4249_RS09295 - adenosine deaminase, at 1,860,156 to 1,861,163
_RS09295
A4249_RS09300: A4249_RS09300 - hypothetical protein, at 1,861,160 to 1,861,480
_RS09300
A4249_RS09305: A4249_RS09305 - type VI secretion protein ImpB, at 1,861,546 to 1,862,835
_RS09305
Position (kb) 1860
1861
1862 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.117 kb on + strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.118 kb on - strand at 1860.122 kb on + strand at 1860.122 kb on + strand at 1860.122 kb on + strand at 1860.123 kb on - strand at 1860.124 kb on + strand at 1860.124 kb on + strand at 1860.124 kb on + strand at 1860.124 kb on + strand at 1860.124 kb on + strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.125 kb on - strand at 1860.171 kb on + strand at 1860.171 kb on + strand at 1860.172 kb on - strand at 1860.172 kb on - strand at 1860.172 kb on - strand at 1860.276 kb on + strand, within A4249_RS09295 at 1860.276 kb on + strand, within A4249_RS09295 at 1860.277 kb on - strand, within A4249_RS09295 at 1860.306 kb on + strand, within A4249_RS09295 at 1860.307 kb on - strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.342 kb on + strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.343 kb on - strand, within A4249_RS09295 at 1860.346 kb on - strand, within A4249_RS09295 at 1860.402 kb on + strand, within A4249_RS09295 at 1860.402 kb on + strand, within A4249_RS09295 at 1860.403 kb on - strand, within A4249_RS09295 at 1860.403 kb on - strand, within A4249_RS09295 at 1860.468 kb on - strand, within A4249_RS09295 at 1860.627 kb on + strand, within A4249_RS09295 at 1860.627 kb on + strand, within A4249_RS09295 at 1860.627 kb on + strand, within A4249_RS09295 at 1860.627 kb on + strand, within A4249_RS09295 at 1860.628 kb on - strand, within A4249_RS09295 at 1860.628 kb on - strand, within A4249_RS09295 at 1860.768 kb on + strand, within A4249_RS09295 at 1860.768 kb on + strand, within A4249_RS09295 at 1860.769 kb on - strand, within A4249_RS09295 at 1860.769 kb on - strand, within A4249_RS09295 at 1860.769 kb on - strand, within A4249_RS09295 at 1860.996 kb on + strand, within A4249_RS09295 at 1860.997 kb on - strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.008 kb on + strand, within A4249_RS09295 at 1861.009 kb on - strand, within A4249_RS09295 at 1861.009 kb on - strand, within A4249_RS09295 at 1861.009 kb on - strand, within A4249_RS09295 at 1861.019 kb on + strand, within A4249_RS09295 at 1861.019 kb on + strand, within A4249_RS09295 at 1861.019 kb on + strand, within A4249_RS09295 at 1861.019 kb on + strand, within A4249_RS09295 at 1861.020 kb on - strand, within A4249_RS09295 at 1861.020 kb on - strand, within A4249_RS09295 at 1861.020 kb on - strand, within A4249_RS09295 at 1861.020 kb on - strand, within A4249_RS09295 at 1861.023 kb on + strand, within A4249_RS09295 at 1861.023 kb on + strand, within A4249_RS09295 at 1861.023 kb on + strand, within A4249_RS09295 at 1861.023 kb on + strand, within A4249_RS09295 at 1861.023 kb on + strand, within A4249_RS09295 at 1861.023 kb on + strand, within A4249_RS09295 at 1861.024 kb on - strand, within A4249_RS09295 at 1861.024 kb on - strand, within A4249_RS09295 at 1861.024 kb on - strand, within A4249_RS09295 at 1861.024 kb on - strand, within A4249_RS09295 at 1861.024 kb on - strand, within A4249_RS09295 at 1861.024 kb on - strand, within A4249_RS09295 at 1861.129 kb on - strand at 1861.129 kb on - strand at 1861.149 kb on + strand at 1861.149 kb on + strand at 1861.150 kb on - strand at 1861.150 kb on - strand at 1861.299 kb on - strand, within A4249_RS09300 at 1861.322 kb on + strand, within A4249_RS09300 at 1861.323 kb on - strand, within A4249_RS09300 at 1861.333 kb on - strand, within A4249_RS09300 at 1861.333 kb on - strand, within A4249_RS09300 at 1861.376 kb on + strand, within A4249_RS09300 at 1861.377 kb on - strand, within A4249_RS09300 at 1861.377 kb on - strand, within A4249_RS09300 at 1861.377 kb on - strand, within A4249_RS09300 at 1861.377 kb on - strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.378 kb on + strand, within A4249_RS09300 at 1861.379 kb on - strand, within A4249_RS09300 at 1861.379 kb on - strand, within A4249_RS09300 at 1861.379 kb on - strand, within A4249_RS09300 at 1861.379 kb on - strand, within A4249_RS09300 at 1861.379 kb on - strand, within A4249_RS09300 at 1861.392 kb on + strand, within A4249_RS09300 at 1861.461 kb on + strand at 1861.461 kb on + strand at 1861.461 kb on + strand at 1861.462 kb on - strand at 1861.462 kb on - strand at 1861.471 kb on + strand at 1861.471 kb on + strand at 1861.471 kb on + strand at 1861.472 kb on - strand at 1861.472 kb on - strand at 1861.492 kb on + strand at 1861.493 kb on - strand at 1861.493 kb on - strand at 1861.493 kb on - strand at 1861.493 kb on - strand at 1861.565 kb on + strand at 1861.565 kb on + strand at 1861.565 kb on + strand at 1861.565 kb on + strand at 1861.565 kb on + strand at 1861.565 kb on + strand at 1861.672 kb on + strand at 1861.672 kb on + strand at 1861.672 kb on + strand at 1861.672 kb on + strand at 1861.672 kb on + strand at 1861.673 kb on - strand at 1861.673 kb on - strand at 1861.673 kb on - strand at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.696 kb on + strand, within A4249_RS09305 at 1861.697 kb on - strand, within A4249_RS09305 at 1861.697 kb on - strand, within A4249_RS09305 at 1861.697 kb on - strand, within A4249_RS09305 at 1861.697 kb on - strand, within A4249_RS09305 at 1861.697 kb on - strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.795 kb on + strand, within A4249_RS09305 at 1861.796 kb on - strand, within A4249_RS09305 at 1861.796 kb on - strand, within A4249_RS09305 at 1861.796 kb on - strand, within A4249_RS09305
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,860,117 + -0.4 1,860,117 + +0.0 1,860,117 + -0.5 1,860,117 + +0.0 1,860,117 + +0.3 1,860,117 + +0.4 1,860,117 + +0.1 1,860,117 + +0.2 1,860,117 + -0.4 1,860,117 + +0.1 1,860,117 + +0.6 1,860,117 + -0.1 1,860,117 + +0.6 1,860,118 - +0.3 1,860,118 - -1.2 1,860,118 - +0.1 1,860,118 - +0.2 1,860,118 - -0.4 1,860,118 - -0.1 1,860,118 - +0.2 1,860,118 - +0.9 1,860,118 - +0.5 1,860,118 - +0.6 1,860,118 - -1.1 1,860,118 - +0.7 1,860,118 - +0.0 1,860,118 - +0.9 1,860,122 + +0.1 1,860,122 + -0.5 1,860,122 + -1.4 1,860,123 - +1.2 1,860,124 + -0.9 1,860,124 + -0.1 1,860,124 + +0.4 1,860,124 + -0.1 1,860,124 + -0.5 1,860,125 - -0.3 1,860,125 - -1.7 1,860,125 - +0.4 1,860,125 - -0.2 1,860,125 - +0.0 1,860,125 - -1.5 1,860,125 - -1.5 1,860,125 - +0.0 1,860,171 + -0.8 1,860,171 + -0.3 1,860,172 - -0.3 1,860,172 - +1.3 1,860,172 - +0.1 1,860,276 + A4249_RS09295 0.12 -0.6 1,860,276 + A4249_RS09295 0.12 -0.2 1,860,277 - A4249_RS09295 0.12 +0.1 1,860,306 + A4249_RS09295 0.15 -0.1 1,860,307 - A4249_RS09295 0.15 -0.7 1,860,342 + A4249_RS09295 0.18 -0.1 1,860,342 + A4249_RS09295 0.18 +0.5 1,860,342 + A4249_RS09295 0.18 -0.6 1,860,342 + A4249_RS09295 0.18 +1.1 1,860,342 + A4249_RS09295 0.18 -0.3 1,860,342 + A4249_RS09295 0.18 +0.4 1,860,342 + A4249_RS09295 0.18 -1.0 1,860,342 + A4249_RS09295 0.18 -1.0 1,860,342 + A4249_RS09295 0.18 -0.5 1,860,342 + A4249_RS09295 0.18 +0.1 1,860,342 + A4249_RS09295 0.18 -0.3 1,860,342 + A4249_RS09295 0.18 -0.8 1,860,342 + A4249_RS09295 0.18 +1.0 1,860,342 + A4249_RS09295 0.18 -0.8 1,860,342 + A4249_RS09295 0.18 -0.7 1,860,342 + A4249_RS09295 0.18 +0.5 1,860,343 - A4249_RS09295 0.19 +0.2 1,860,343 - A4249_RS09295 0.19 -1.9 1,860,343 - A4249_RS09295 0.19 +0.3 1,860,343 - A4249_RS09295 0.19 -1.5 1,860,343 - A4249_RS09295 0.19 -1.5 1,860,343 - A4249_RS09295 0.19 +0.2 1,860,343 - A4249_RS09295 0.19 +0.1 1,860,343 - A4249_RS09295 0.19 -0.3 1,860,346 - A4249_RS09295 0.19 -0.2 1,860,402 + A4249_RS09295 0.24 -1.0 1,860,402 + A4249_RS09295 0.24 +0.3 1,860,403 - A4249_RS09295 0.25 -1.0 1,860,403 - A4249_RS09295 0.25 -0.4 1,860,468 - A4249_RS09295 0.31 -0.7 1,860,627 + A4249_RS09295 0.47 -0.2 1,860,627 + A4249_RS09295 0.47 -0.5 1,860,627 + A4249_RS09295 0.47 +0.1 1,860,627 + A4249_RS09295 0.47 +0.1 1,860,628 - A4249_RS09295 0.47 -0.6 1,860,628 - A4249_RS09295 0.47 -1.2 1,860,768 + A4249_RS09295 0.61 -0.3 1,860,768 + A4249_RS09295 0.61 -1.1 1,860,769 - A4249_RS09295 0.61 -1.2 1,860,769 - A4249_RS09295 0.61 +0.1 1,860,769 - A4249_RS09295 0.61 -0.8 1,860,996 + A4249_RS09295 0.83 +0.1 1,860,997 - A4249_RS09295 0.83 -0.3 1,861,008 + A4249_RS09295 0.85 -0.1 1,861,008 + A4249_RS09295 0.85 +0.2 1,861,008 + A4249_RS09295 0.85 -0.0 1,861,008 + A4249_RS09295 0.85 -0.0 1,861,008 + A4249_RS09295 0.85 +0.8 1,861,008 + A4249_RS09295 0.85 -0.1 1,861,008 + A4249_RS09295 0.85 +0.3 1,861,009 - A4249_RS09295 0.85 -1.1 1,861,009 - A4249_RS09295 0.85 -0.3 1,861,009 - A4249_RS09295 0.85 -0.7 1,861,019 + A4249_RS09295 0.86 +0.0 1,861,019 + A4249_RS09295 0.86 -0.7 1,861,019 + A4249_RS09295 0.86 -0.1 1,861,019 + A4249_RS09295 0.86 +0.7 1,861,020 - A4249_RS09295 0.86 -0.3 1,861,020 - A4249_RS09295 0.86 +0.1 1,861,020 - A4249_RS09295 0.86 +1.4 1,861,020 - A4249_RS09295 0.86 -0.0 1,861,023 + A4249_RS09295 0.86 -0.1 1,861,023 + A4249_RS09295 0.86 +0.1 1,861,023 + A4249_RS09295 0.86 -1.7 1,861,023 + A4249_RS09295 0.86 -0.2 1,861,023 + A4249_RS09295 0.86 -0.6 1,861,023 + A4249_RS09295 0.86 +0.5 1,861,024 - A4249_RS09295 0.86 +0.2 1,861,024 - A4249_RS09295 0.86 +0.5 1,861,024 - A4249_RS09295 0.86 -1.3 1,861,024 - A4249_RS09295 0.86 -0.3 1,861,024 - A4249_RS09295 0.86 -0.4 1,861,024 - A4249_RS09295 0.86 -0.6 1,861,129 - +0.5 1,861,129 - -0.0 1,861,149 + +0.1 1,861,149 + +0.1 1,861,150 - -0.7 1,861,150 - -0.2 1,861,299 - A4249_RS09300 0.43 -0.2 1,861,322 + A4249_RS09300 0.50 -0.8 1,861,323 - A4249_RS09300 0.51 -0.1 1,861,333 - A4249_RS09300 0.54 +0.3 1,861,333 - A4249_RS09300 0.54 +0.2 1,861,376 + A4249_RS09300 0.67 +0.1 1,861,377 - A4249_RS09300 0.68 -0.4 1,861,377 - A4249_RS09300 0.68 -0.2 1,861,377 - A4249_RS09300 0.68 +0.2 1,861,377 - A4249_RS09300 0.68 -0.1 1,861,378 + A4249_RS09300 0.68 +0.3 1,861,378 + A4249_RS09300 0.68 +0.1 1,861,378 + A4249_RS09300 0.68 -0.1 1,861,378 + A4249_RS09300 0.68 +0.1 1,861,378 + A4249_RS09300 0.68 +0.3 1,861,378 + A4249_RS09300 0.68 +0.1 1,861,378 + A4249_RS09300 0.68 -0.1 1,861,378 + A4249_RS09300 0.68 +0.2 1,861,378 + A4249_RS09300 0.68 -0.5 1,861,378 + A4249_RS09300 0.68 -0.0 1,861,379 - A4249_RS09300 0.68 -1.2 1,861,379 - A4249_RS09300 0.68 +0.9 1,861,379 - A4249_RS09300 0.68 -0.4 1,861,379 - A4249_RS09300 0.68 -0.1 1,861,379 - A4249_RS09300 0.68 -0.4 1,861,392 + A4249_RS09300 0.72 -0.5 1,861,461 + +0.0 1,861,461 + -1.3 1,861,461 + +0.9 1,861,462 - -0.3 1,861,462 - +0.4 1,861,471 + -0.7 1,861,471 + -0.2 1,861,471 + +1.1 1,861,472 - -0.7 1,861,472 - -0.1 1,861,492 + -0.4 1,861,493 - +1.8 1,861,493 - -0.1 1,861,493 - -0.3 1,861,493 - -0.2 1,861,565 + +0.1 1,861,565 + -0.1 1,861,565 + -0.3 1,861,565 + -0.2 1,861,565 + +0.4 1,861,565 + -0.4 1,861,672 + +0.7 1,861,672 + -0.1 1,861,672 + -0.4 1,861,672 + +0.5 1,861,672 + -0.2 1,861,673 - +0.8 1,861,673 - -0.5 1,861,673 - +0.2 1,861,696 + A4249_RS09305 0.12 -1.3 1,861,696 + A4249_RS09305 0.12 -0.9 1,861,696 + A4249_RS09305 0.12 +0.4 1,861,696 + A4249_RS09305 0.12 -0.1 1,861,696 + A4249_RS09305 0.12 -1.7 1,861,696 + A4249_RS09305 0.12 -0.1 1,861,696 + A4249_RS09305 0.12 -0.2 1,861,696 + A4249_RS09305 0.12 -0.3 1,861,696 + A4249_RS09305 0.12 -0.4 1,861,696 + A4249_RS09305 0.12 +0.4 1,861,696 + A4249_RS09305 0.12 +0.3 1,861,697 - A4249_RS09305 0.12 +0.2 1,861,697 - A4249_RS09305 0.12 +0.1 1,861,697 - A4249_RS09305 0.12 +0.5 1,861,697 - A4249_RS09305 0.12 +0.2 1,861,697 - A4249_RS09305 0.12 -0.1 1,861,795 + A4249_RS09305 0.19 -0.5 1,861,795 + A4249_RS09305 0.19 -0.1 1,861,795 + A4249_RS09305 0.19 -0.7 1,861,795 + A4249_RS09305 0.19 -0.2 1,861,795 + A4249_RS09305 0.19 +1.5 1,861,795 + A4249_RS09305 0.19 -0.4 1,861,795 + A4249_RS09305 0.19 +0.2 1,861,796 - A4249_RS09305 0.19 +0.1 1,861,796 - A4249_RS09305 0.19 +0.1 1,861,796 - A4249_RS09305 0.19 +0.7
Or see this region's nucleotide sequence