Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09165

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS09155 and A4249_RS09160 are separated by 27 nucleotidesA4249_RS09160 and A4249_RS09165 are separated by 38 nucleotidesA4249_RS09165 and A4249_RS09170 are separated by 18 nucleotidesA4249_RS09170 and A4249_RS09175 are separated by 10 nucleotides A4249_RS09155: A4249_RS09155 - gamma-glutamyltransferase family protein, at 1,832,843 to 1,834,672 _RS09155 A4249_RS09160: A4249_RS09160 - MmcQ/YjbR family DNA-binding protein, at 1,834,700 to 1,835,062 _RS09160 A4249_RS09165: A4249_RS09165 - aldo/keto reductase, at 1,835,101 to 1,835,943 _RS09165 A4249_RS09170: A4249_RS09170 - Pr6Pr family membrane protein, at 1,835,962 to 1,836,624 _RS09170 A4249_RS09175: A4249_RS09175 - UbiD family decarboxylase, at 1,836,635 to 1,838,164 _RS09175 Position (kb) 1835 1836Strain fitness (log2 ratio) -2 -1 0 1at 1834.136 kb on + strand, within A4249_RS09155at 1834.136 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.247 kb on + strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.248 kb on - strand, within A4249_RS09155at 1834.436 kb on + strand, within A4249_RS09155at 1834.436 kb on + strand, within A4249_RS09155at 1834.436 kb on + strand, within A4249_RS09155at 1834.437 kb on - strand, within A4249_RS09155at 1834.437 kb on - strand, within A4249_RS09155at 1834.437 kb on - strand, within A4249_RS09155at 1834.437 kb on - strand, within A4249_RS09155at 1834.577 kb on + strandat 1834.622 kb on + strandat 1834.622 kb on + strandat 1834.622 kb on + strandat 1834.623 kb on - strandat 1834.623 kb on - strandat 1834.623 kb on - strandat 1834.623 kb on - strandat 1834.623 kb on - strandat 1834.667 kb on + strandat 1834.667 kb on + strandat 1834.667 kb on + strandat 1834.668 kb on - strandat 1834.668 kb on - strandat 1834.668 kb on - strandat 1834.668 kb on - strandat 1834.668 kb on - strandat 1834.681 kb on + strandat 1834.681 kb on + strandat 1834.682 kb on - strandat 1834.763 kb on + strand, within A4249_RS09160at 1834.763 kb on + strand, within A4249_RS09160at 1834.763 kb on + strand, within A4249_RS09160at 1834.764 kb on - strand, within A4249_RS09160at 1834.785 kb on + strand, within A4249_RS09160at 1834.786 kb on - strand, within A4249_RS09160at 1834.913 kb on + strand, within A4249_RS09160at 1835.060 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.064 kb on + strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.065 kb on - strandat 1835.108 kb on - strandat 1835.108 kb on - strandat 1835.108 kb on - strandat 1835.108 kb on - strandat 1835.254 kb on + strand, within A4249_RS09165at 1835.254 kb on + strand, within A4249_RS09165at 1835.254 kb on + strand, within A4249_RS09165at 1835.254 kb on + strand, within A4249_RS09165at 1835.254 kb on + strand, within A4249_RS09165at 1835.255 kb on - strand, within A4249_RS09165at 1835.255 kb on - strand, within A4249_RS09165at 1835.255 kb on - strand, within A4249_RS09165at 1835.255 kb on - strand, within A4249_RS09165at 1835.255 kb on - strand, within A4249_RS09165at 1835.599 kb on + strand, within A4249_RS09165at 1835.599 kb on + strand, within A4249_RS09165at 1835.600 kb on - strand, within A4249_RS09165at 1835.600 kb on - strand, within A4249_RS09165at 1835.775 kb on + strand, within A4249_RS09165at 1835.776 kb on - strand, within A4249_RS09165at 1836.040 kb on + strand, within A4249_RS09170at 1836.040 kb on + strand, within A4249_RS09170at 1836.040 kb on + strand, within A4249_RS09170at 1836.040 kb on + strand, within A4249_RS09170at 1836.040 kb on + strand, within A4249_RS09170at 1836.040 kb on + strand, within A4249_RS09170at 1836.040 kb on + strand, within A4249_RS09170at 1836.041 kb on - strand, within A4249_RS09170at 1836.097 kb on + strand, within A4249_RS09170at 1836.097 kb on + strand, within A4249_RS09170at 1836.097 kb on + strand, within A4249_RS09170at 1836.098 kb on - strand, within A4249_RS09170at 1836.098 kb on - strand, within A4249_RS09170at 1836.098 kb on - strand, within A4249_RS09170at 1836.098 kb on - strand, within A4249_RS09170at 1836.119 kb on + strand, within A4249_RS09170at 1836.119 kb on + strand, within A4249_RS09170at 1836.120 kb on - strand, within A4249_RS09170at 1836.120 kb on - strand, within A4249_RS09170at 1836.120 kb on - strand, within A4249_RS09170at 1836.161 kb on + strand, within A4249_RS09170at 1836.161 kb on + strand, within A4249_RS09170at 1836.161 kb on + strand, within A4249_RS09170at 1836.161 kb on + strand, within A4249_RS09170at 1836.161 kb on + strand, within A4249_RS09170at 1836.162 kb on - strand, within A4249_RS09170at 1836.162 kb on - strand, within A4249_RS09170at 1836.162 kb on - strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.226 kb on + strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.227 kb on - strand, within A4249_RS09170at 1836.250 kb on + strand, within A4249_RS09170at 1836.250 kb on + strand, within A4249_RS09170at 1836.250 kb on + strand, within A4249_RS09170at 1836.250 kb on + strand, within A4249_RS09170at 1836.250 kb on + strand, within A4249_RS09170at 1836.251 kb on - strand, within A4249_RS09170at 1836.251 kb on - strand, within A4249_RS09170at 1836.251 kb on - strand, within A4249_RS09170at 1836.251 kb on - strand, within A4249_RS09170at 1836.271 kb on + strand, within A4249_RS09170at 1836.272 kb on - strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.319 kb on + strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.320 kb on - strand, within A4249_RS09170at 1836.469 kb on + strand, within A4249_RS09170at 1836.470 kb on - strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.471 kb on + strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.472 kb on - strand, within A4249_RS09170at 1836.622 kb on + strandat 1836.622 kb on + strandat 1836.622 kb on + strandat 1836.623 kb on - strandat 1836.641 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,834,136 + A4249_RS09155 0.71 -0.3
1,834,136 + A4249_RS09155 0.71 -1.4
1,834,247 + A4249_RS09155 0.77 -0.1
1,834,247 + A4249_RS09155 0.77 -2.0
1,834,247 + A4249_RS09155 0.77 -0.1
1,834,247 + A4249_RS09155 0.77 -0.7
1,834,247 + A4249_RS09155 0.77 +0.3
1,834,247 + A4249_RS09155 0.77 -0.1
1,834,247 + A4249_RS09155 0.77 +1.1
1,834,247 + A4249_RS09155 0.77 +0.6
1,834,247 + A4249_RS09155 0.77 -0.2
1,834,247 + A4249_RS09155 0.77 -0.9
1,834,247 + A4249_RS09155 0.77 +0.1
1,834,247 + A4249_RS09155 0.77 -0.4
1,834,247 + A4249_RS09155 0.77 +0.4
1,834,248 - A4249_RS09155 0.77 -0.2
1,834,248 - A4249_RS09155 0.77 +0.5
1,834,248 - A4249_RS09155 0.77 +0.1
1,834,248 - A4249_RS09155 0.77 +0.1
1,834,248 - A4249_RS09155 0.77 -0.7
1,834,248 - A4249_RS09155 0.77 -0.0
1,834,248 - A4249_RS09155 0.77 +1.6
1,834,248 - A4249_RS09155 0.77 +0.5
1,834,248 - A4249_RS09155 0.77 -0.2
1,834,248 - A4249_RS09155 0.77 -0.3
1,834,248 - A4249_RS09155 0.77 -0.3
1,834,248 - A4249_RS09155 0.77 +0.7
1,834,248 - A4249_RS09155 0.77 -0.7
1,834,248 - A4249_RS09155 0.77 -0.5
1,834,248 - A4249_RS09155 0.77 +1.2
1,834,248 - A4249_RS09155 0.77 +0.4
1,834,248 - A4249_RS09155 0.77 -0.2
1,834,436 + A4249_RS09155 0.87 +0.1
1,834,436 + A4249_RS09155 0.87 +0.1
1,834,436 + A4249_RS09155 0.87 -0.1
1,834,437 - A4249_RS09155 0.87 +0.5
1,834,437 - A4249_RS09155 0.87 +0.1
1,834,437 - A4249_RS09155 0.87 +0.9
1,834,437 - A4249_RS09155 0.87 -0.4
1,834,577 + -0.4
1,834,622 + -0.8
1,834,622 + -1.3
1,834,622 + +0.3
1,834,623 - -0.6
1,834,623 - +0.6
1,834,623 - -2.3
1,834,623 - +0.2
1,834,623 - +0.2
1,834,667 + +0.5
1,834,667 + +0.9
1,834,667 + +0.2
1,834,668 - -0.3
1,834,668 - -0.6
1,834,668 - +0.7
1,834,668 - -0.1
1,834,668 - -1.0
1,834,681 + +0.6
1,834,681 + +0.2
1,834,682 - +0.5
1,834,763 + A4249_RS09160 0.17 +1.3
1,834,763 + A4249_RS09160 0.17 -0.7
1,834,763 + A4249_RS09160 0.17 -1.9
1,834,764 - A4249_RS09160 0.18 -0.7
1,834,785 + A4249_RS09160 0.23 -1.2
1,834,786 - A4249_RS09160 0.24 -0.4
1,834,913 + A4249_RS09160 0.59 -0.5
1,835,060 + -1.3
1,835,064 + -0.1
1,835,064 + +0.6
1,835,064 + -0.0
1,835,064 + -0.5
1,835,064 + -0.3
1,835,064 + -0.6
1,835,064 + +0.8
1,835,064 + +0.2
1,835,064 + +0.4
1,835,064 + +0.5
1,835,065 - +0.3
1,835,065 - -0.1
1,835,065 - +0.1
1,835,065 - -0.6
1,835,065 - +0.1
1,835,065 - -0.5
1,835,065 - -0.7
1,835,065 - +0.3
1,835,065 - +0.2
1,835,065 - +0.3
1,835,065 - -0.4
1,835,108 - +1.1
1,835,108 - -0.2
1,835,108 - +0.7
1,835,108 - -0.1
1,835,254 + A4249_RS09165 0.18 +0.5
1,835,254 + A4249_RS09165 0.18 -0.1
1,835,254 + A4249_RS09165 0.18 -0.1
1,835,254 + A4249_RS09165 0.18 +0.1
1,835,254 + A4249_RS09165 0.18 +0.5
1,835,255 - A4249_RS09165 0.18 +0.1
1,835,255 - A4249_RS09165 0.18 -0.3
1,835,255 - A4249_RS09165 0.18 -0.1
1,835,255 - A4249_RS09165 0.18 -0.2
1,835,255 - A4249_RS09165 0.18 +1.0
1,835,599 + A4249_RS09165 0.59 -0.3
1,835,599 + A4249_RS09165 0.59 +1.4
1,835,600 - A4249_RS09165 0.59 -0.2
1,835,600 - A4249_RS09165 0.59 +0.0
1,835,775 + A4249_RS09165 0.80 -1.0
1,835,776 - A4249_RS09165 0.80 -0.5
1,836,040 + A4249_RS09170 0.12 +0.2
1,836,040 + A4249_RS09170 0.12 -0.4
1,836,040 + A4249_RS09170 0.12 -0.0
1,836,040 + A4249_RS09170 0.12 +0.7
1,836,040 + A4249_RS09170 0.12 -0.1
1,836,040 + A4249_RS09170 0.12 +0.3
1,836,040 + A4249_RS09170 0.12 -1.7
1,836,041 - A4249_RS09170 0.12 -1.0
1,836,097 + A4249_RS09170 0.20 -0.0
1,836,097 + A4249_RS09170 0.20 -0.6
1,836,097 + A4249_RS09170 0.20 -2.0
1,836,098 - A4249_RS09170 0.21 -1.2
1,836,098 - A4249_RS09170 0.21 +0.2
1,836,098 - A4249_RS09170 0.21 -0.1
1,836,098 - A4249_RS09170 0.21 -0.2
1,836,119 + A4249_RS09170 0.24 -2.0
1,836,119 + A4249_RS09170 0.24 +0.4
1,836,120 - A4249_RS09170 0.24 -0.3
1,836,120 - A4249_RS09170 0.24 -0.5
1,836,120 - A4249_RS09170 0.24 -0.6
1,836,161 + A4249_RS09170 0.30 +0.1
1,836,161 + A4249_RS09170 0.30 +0.3
1,836,161 + A4249_RS09170 0.30 -0.1
1,836,161 + A4249_RS09170 0.30 +0.2
1,836,161 + A4249_RS09170 0.30 -0.3
1,836,162 - A4249_RS09170 0.30 -0.1
1,836,162 - A4249_RS09170 0.30 -1.0
1,836,162 - A4249_RS09170 0.30 -0.1
1,836,226 + A4249_RS09170 0.40 -0.5
1,836,226 + A4249_RS09170 0.40 +0.0
1,836,226 + A4249_RS09170 0.40 -0.3
1,836,226 + A4249_RS09170 0.40 +0.9
1,836,226 + A4249_RS09170 0.40 -0.6
1,836,226 + A4249_RS09170 0.40 +0.2
1,836,226 + A4249_RS09170 0.40 +0.0
1,836,226 + A4249_RS09170 0.40 -0.7
1,836,226 + A4249_RS09170 0.40 -0.1
1,836,226 + A4249_RS09170 0.40 -0.1
1,836,226 + A4249_RS09170 0.40 +0.5
1,836,226 + A4249_RS09170 0.40 -1.3
1,836,226 + A4249_RS09170 0.40 -0.2
1,836,226 + A4249_RS09170 0.40 +0.3
1,836,227 - A4249_RS09170 0.40 -0.3
1,836,227 - A4249_RS09170 0.40 -0.2
1,836,227 - A4249_RS09170 0.40 +0.6
1,836,227 - A4249_RS09170 0.40 +0.4
1,836,227 - A4249_RS09170 0.40 -1.8
1,836,227 - A4249_RS09170 0.40 -0.1
1,836,227 - A4249_RS09170 0.40 -0.9
1,836,227 - A4249_RS09170 0.40 -0.9
1,836,227 - A4249_RS09170 0.40 +1.4
1,836,227 - A4249_RS09170 0.40 +0.2
1,836,227 - A4249_RS09170 0.40 -1.3
1,836,227 - A4249_RS09170 0.40 +0.2
1,836,250 + A4249_RS09170 0.43 -0.2
1,836,250 + A4249_RS09170 0.43 +0.9
1,836,250 + A4249_RS09170 0.43 -0.5
1,836,250 + A4249_RS09170 0.43 -0.6
1,836,250 + A4249_RS09170 0.43 +0.7
1,836,251 - A4249_RS09170 0.44 +0.7
1,836,251 - A4249_RS09170 0.44 -0.8
1,836,251 - A4249_RS09170 0.44 +0.2
1,836,251 - A4249_RS09170 0.44 -0.5
1,836,271 + A4249_RS09170 0.47 +0.2
1,836,272 - A4249_RS09170 0.47 -0.2
1,836,319 + A4249_RS09170 0.54 -0.2
1,836,319 + A4249_RS09170 0.54 -0.2
1,836,319 + A4249_RS09170 0.54 +0.4
1,836,319 + A4249_RS09170 0.54 +0.2
1,836,319 + A4249_RS09170 0.54 -0.6
1,836,319 + A4249_RS09170 0.54 -1.3
1,836,319 + A4249_RS09170 0.54 -0.1
1,836,319 + A4249_RS09170 0.54 +0.4
1,836,319 + A4249_RS09170 0.54 +0.5
1,836,319 + A4249_RS09170 0.54 +0.8
1,836,319 + A4249_RS09170 0.54 -1.4
1,836,320 - A4249_RS09170 0.54 -0.6
1,836,320 - A4249_RS09170 0.54 -0.1
1,836,320 - A4249_RS09170 0.54 -0.4
1,836,320 - A4249_RS09170 0.54 -1.3
1,836,320 - A4249_RS09170 0.54 +0.2
1,836,320 - A4249_RS09170 0.54 -0.7
1,836,320 - A4249_RS09170 0.54 -1.0
1,836,320 - A4249_RS09170 0.54 +0.8
1,836,469 + A4249_RS09170 0.76 -0.3
1,836,470 - A4249_RS09170 0.77 +0.2
1,836,471 + A4249_RS09170 0.77 +0.7
1,836,471 + A4249_RS09170 0.77 +0.2
1,836,471 + A4249_RS09170 0.77 +1.1
1,836,471 + A4249_RS09170 0.77 -0.1
1,836,471 + A4249_RS09170 0.77 -1.2
1,836,471 + A4249_RS09170 0.77 +0.5
1,836,471 + A4249_RS09170 0.77 -1.3
1,836,471 + A4249_RS09170 0.77 -0.1
1,836,472 - A4249_RS09170 0.77 +0.6
1,836,472 - A4249_RS09170 0.77 +0.5
1,836,472 - A4249_RS09170 0.77 +0.1
1,836,472 - A4249_RS09170 0.77 -0.2
1,836,472 - A4249_RS09170 0.77 +0.2
1,836,472 - A4249_RS09170 0.77 -0.2
1,836,472 - A4249_RS09170 0.77 -0.9
1,836,472 - A4249_RS09170 0.77 +0.0
1,836,472 - A4249_RS09170 0.77 -0.3
1,836,472 - A4249_RS09170 0.77 -0.3
1,836,472 - A4249_RS09170 0.77 -0.2
1,836,472 - A4249_RS09170 0.77 -0.4
1,836,622 + -0.8
1,836,622 + -0.1
1,836,622 + +0.6
1,836,623 - -1.3
1,836,641 + -1.3

Or see this region's nucleotide sequence