Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08585 and A4249_RS08590 overlap by 4 nucleotides A4249_RS08590 and A4249_RS08595 are separated by 12 nucleotides A4249_RS08595 and A4249_RS08600 overlap by 4 nucleotides
A4249_RS08585: A4249_RS08585 - ABC-type transport auxiliary lipoprotein family protein, at 1,721,956 to 1,722,606
_RS08585
A4249_RS08590: A4249_RS08590 - MlaD family protein, at 1,722,603 to 1,723,541
_RS08590
A4249_RS08595: A4249_RS08595 - ABC transporter ATP-binding protein, at 1,723,554 to 1,724,330
_RS08595
A4249_RS08600: A4249_RS08600 - ABC transporter permease, at 1,724,327 to 1,725,442
_RS08600
Position (kb)
1723
1724
1725 Strain fitness (log2 ratio)
-1
0
1
2 at 1722.644 kb on + strand at 1722.866 kb on + strand, within A4249_RS08590 at 1722.867 kb on - strand, within A4249_RS08590 at 1722.867 kb on - strand, within A4249_RS08590 at 1722.867 kb on - strand, within A4249_RS08590 at 1722.904 kb on + strand, within A4249_RS08590 at 1722.904 kb on + strand, within A4249_RS08590 at 1723.163 kb on - strand, within A4249_RS08590 at 1723.213 kb on + strand, within A4249_RS08590 at 1723.213 kb on + strand, within A4249_RS08590 at 1723.213 kb on + strand, within A4249_RS08590 at 1723.213 kb on + strand, within A4249_RS08590 at 1723.214 kb on - strand, within A4249_RS08590 at 1723.214 kb on - strand, within A4249_RS08590 at 1723.408 kb on + strand, within A4249_RS08590 at 1723.408 kb on + strand, within A4249_RS08590 at 1723.408 kb on + strand, within A4249_RS08590 at 1723.408 kb on + strand, within A4249_RS08590 at 1723.409 kb on - strand, within A4249_RS08590 at 1723.409 kb on - strand, within A4249_RS08590 at 1723.409 kb on - strand, within A4249_RS08590 at 1723.423 kb on + strand, within A4249_RS08590 at 1723.423 kb on + strand, within A4249_RS08590 at 1723.423 kb on + strand, within A4249_RS08590 at 1723.423 kb on + strand, within A4249_RS08590 at 1723.423 kb on + strand, within A4249_RS08590 at 1723.423 kb on + strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.424 kb on - strand, within A4249_RS08590 at 1723.432 kb on + strand, within A4249_RS08590 at 1723.433 kb on - strand, within A4249_RS08590 at 1723.522 kb on + strand at 1723.523 kb on - strand at 1723.523 kb on - strand at 1723.523 kb on - strand at 1723.702 kb on + strand, within A4249_RS08595 at 1723.702 kb on + strand, within A4249_RS08595 at 1723.703 kb on - strand, within A4249_RS08595 at 1723.703 kb on - strand, within A4249_RS08595 at 1723.966 kb on + strand, within A4249_RS08595 at 1723.966 kb on + strand, within A4249_RS08595 at 1723.966 kb on + strand, within A4249_RS08595 at 1723.967 kb on - strand, within A4249_RS08595 at 1723.967 kb on - strand, within A4249_RS08595 at 1723.967 kb on - strand, within A4249_RS08595 at 1723.967 kb on - strand, within A4249_RS08595 at 1723.970 kb on + strand, within A4249_RS08595 at 1723.970 kb on + strand, within A4249_RS08595 at 1723.971 kb on - strand, within A4249_RS08595 at 1724.123 kb on - strand, within A4249_RS08595 at 1724.330 kb on + strand at 1724.330 kb on + strand at 1724.330 kb on + strand at 1724.330 kb on + strand at 1724.331 kb on - strand at 1724.331 kb on - strand at 1724.331 kb on - strand at 1724.331 kb on - strand at 1724.331 kb on - strand at 1724.331 kb on - strand at 1724.636 kb on - strand, within A4249_RS08600 at 1724.636 kb on - strand, within A4249_RS08600 at 1725.090 kb on + strand, within A4249_RS08600 at 1725.090 kb on + strand, within A4249_RS08600 at 1725.090 kb on + strand, within A4249_RS08600 at 1725.186 kb on + strand, within A4249_RS08600 at 1725.186 kb on + strand, within A4249_RS08600 at 1725.186 kb on + strand, within A4249_RS08600 at 1725.186 kb on + strand, within A4249_RS08600 at 1725.187 kb on - strand, within A4249_RS08600 at 1725.187 kb on - strand, within A4249_RS08600 at 1725.187 kb on - strand, within A4249_RS08600 at 1725.187 kb on - strand, within A4249_RS08600 at 1725.187 kb on - strand, within A4249_RS08600
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,722,644 + +1.5 1,722,866 + A4249_RS08590 0.28 -0.9 1,722,867 - A4249_RS08590 0.28 +0.6 1,722,867 - A4249_RS08590 0.28 +0.6 1,722,867 - A4249_RS08590 0.28 -0.7 1,722,904 + A4249_RS08590 0.32 +0.6 1,722,904 + A4249_RS08590 0.32 +0.5 1,723,163 - A4249_RS08590 0.60 +0.5 1,723,213 + A4249_RS08590 0.65 +1.4 1,723,213 + A4249_RS08590 0.65 +0.9 1,723,213 + A4249_RS08590 0.65 +0.1 1,723,213 + A4249_RS08590 0.65 +0.9 1,723,214 - A4249_RS08590 0.65 +1.5 1,723,214 - A4249_RS08590 0.65 -0.8 1,723,408 + A4249_RS08590 0.86 +0.1 1,723,408 + A4249_RS08590 0.86 -0.4 1,723,408 + A4249_RS08590 0.86 +0.3 1,723,408 + A4249_RS08590 0.86 -0.1 1,723,409 - A4249_RS08590 0.86 +0.6 1,723,409 - A4249_RS08590 0.86 +0.4 1,723,409 - A4249_RS08590 0.86 +0.3 1,723,423 + A4249_RS08590 0.87 -0.7 1,723,423 + A4249_RS08590 0.87 +0.2 1,723,423 + A4249_RS08590 0.87 -1.2 1,723,423 + A4249_RS08590 0.87 -1.5 1,723,423 + A4249_RS08590 0.87 +0.2 1,723,423 + A4249_RS08590 0.87 +0.6 1,723,424 - A4249_RS08590 0.87 +0.4 1,723,424 - A4249_RS08590 0.87 +0.5 1,723,424 - A4249_RS08590 0.87 +0.8 1,723,424 - A4249_RS08590 0.87 +0.2 1,723,424 - A4249_RS08590 0.87 +1.1 1,723,424 - A4249_RS08590 0.87 +0.1 1,723,424 - A4249_RS08590 0.87 -0.9 1,723,424 - A4249_RS08590 0.87 -1.2 1,723,432 + A4249_RS08590 0.88 +0.8 1,723,433 - A4249_RS08590 0.88 +0.1 1,723,522 + +1.1 1,723,523 - +0.9 1,723,523 - -1.5 1,723,523 - +1.8 1,723,702 + A4249_RS08595 0.19 +1.0 1,723,702 + A4249_RS08595 0.19 -0.3 1,723,703 - A4249_RS08595 0.19 -0.7 1,723,703 - A4249_RS08595 0.19 +0.2 1,723,966 + A4249_RS08595 0.53 +0.4 1,723,966 + A4249_RS08595 0.53 -0.1 1,723,966 + A4249_RS08595 0.53 -0.2 1,723,967 - A4249_RS08595 0.53 -1.2 1,723,967 - A4249_RS08595 0.53 +1.0 1,723,967 - A4249_RS08595 0.53 +0.1 1,723,967 - A4249_RS08595 0.53 +0.5 1,723,970 + A4249_RS08595 0.54 +0.8 1,723,970 + A4249_RS08595 0.54 +0.4 1,723,971 - A4249_RS08595 0.54 +1.2 1,724,123 - A4249_RS08595 0.73 +0.1 1,724,330 + -0.7 1,724,330 + -0.1 1,724,330 + +0.6 1,724,330 + +0.9 1,724,331 - +0.5 1,724,331 - -0.2 1,724,331 - -0.6 1,724,331 - -1.1 1,724,331 - +0.1 1,724,331 - +0.1 1,724,636 - A4249_RS08600 0.28 +0.4 1,724,636 - A4249_RS08600 0.28 -0.3 1,725,090 + A4249_RS08600 0.68 +0.2 1,725,090 + A4249_RS08600 0.68 -0.8 1,725,090 + A4249_RS08600 0.68 -1.4 1,725,186 + A4249_RS08600 0.77 +0.6 1,725,186 + A4249_RS08600 0.77 +0.2 1,725,186 + A4249_RS08600 0.77 -0.4 1,725,186 + A4249_RS08600 0.77 +2.0 1,725,187 - A4249_RS08600 0.77 -0.7 1,725,187 - A4249_RS08600 0.77 -0.3 1,725,187 - A4249_RS08600 0.77 +0.2 1,725,187 - A4249_RS08600 0.77 +0.2 1,725,187 - A4249_RS08600 0.77 +2.2
Or see this region's nucleotide sequence