Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08085 and A4249_RS08090 are separated by 340 nucleotides A4249_RS08090 and A4249_RS16615 are separated by 473 nucleotides A4249_RS16615 and A4249_RS08095 are separated by 132 nucleotides
A4249_RS08085: A4249_RS08085 - DNA-directed RNA polymerase subunit beta, at 1,621,930 to 1,626,045
_RS08085
A4249_RS08090: A4249_RS08090 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,626,386 to 1,626,937
_RS08090
A4249_RS16615: A4249_RS16615 - hypothetical protein, at 1,627,411 to 1,627,554
_RS16615
A4249_RS08095: A4249_RS08095 - M61 family metallopeptidase, at 1,627,687 to 1,629,648
_RS08095
Position (kb)
1626
1627 Strain fitness (log2 ratio)
-2
-1
0
1 at 1626.181 kb on - strand at 1626.262 kb on - strand at 1626.262 kb on - strand at 1626.262 kb on - strand at 1626.262 kb on - strand at 1626.262 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.287 kb on - strand at 1626.289 kb on - strand at 1626.289 kb on - strand at 1626.374 kb on + strand at 1626.374 kb on + strand at 1626.375 kb on - strand at 1626.375 kb on - strand at 1626.375 kb on - strand at 1626.375 kb on - strand at 1626.375 kb on - strand at 1626.386 kb on - strand at 1626.386 kb on - strand at 1626.386 kb on - strand at 1626.386 kb on - strand at 1626.386 kb on - strand at 1626.461 kb on + strand, within A4249_RS08090 at 1626.461 kb on + strand, within A4249_RS08090 at 1626.461 kb on + strand, within A4249_RS08090 at 1626.461 kb on + strand, within A4249_RS08090 at 1626.461 kb on + strand, within A4249_RS08090 at 1626.461 kb on + strand, within A4249_RS08090 at 1626.462 kb on - strand, within A4249_RS08090 at 1626.462 kb on - strand, within A4249_RS08090 at 1626.462 kb on - strand, within A4249_RS08090 at 1626.462 kb on - strand, within A4249_RS08090 at 1626.462 kb on - strand, within A4249_RS08090 at 1626.462 kb on - strand, within A4249_RS08090 at 1626.560 kb on + strand, within A4249_RS08090 at 1626.560 kb on + strand, within A4249_RS08090 at 1626.617 kb on + strand, within A4249_RS08090 at 1626.728 kb on + strand, within A4249_RS08090 at 1626.728 kb on + strand, within A4249_RS08090 at 1626.728 kb on + strand, within A4249_RS08090 at 1626.728 kb on + strand, within A4249_RS08090 at 1626.729 kb on - strand, within A4249_RS08090 at 1626.729 kb on - strand, within A4249_RS08090 at 1626.729 kb on - strand, within A4249_RS08090 at 1626.818 kb on + strand, within A4249_RS08090 at 1626.849 kb on - strand, within A4249_RS08090 at 1626.976 kb on + strand at 1626.977 kb on - strand at 1626.977 kb on - strand at 1627.000 kb on + strand at 1627.000 kb on + strand at 1627.000 kb on + strand at 1627.157 kb on + strand at 1627.157 kb on + strand at 1627.158 kb on - strand at 1627.158 kb on - strand at 1627.158 kb on - strand at 1627.158 kb on - strand at 1627.158 kb on - strand at 1627.295 kb on + strand at 1627.295 kb on + strand at 1627.295 kb on + strand at 1627.295 kb on + strand at 1627.295 kb on + strand at 1627.471 kb on + strand, within A4249_RS16615 at 1627.475 kb on - strand, within A4249_RS16615 at 1627.733 kb on + strand at 1627.733 kb on + strand at 1627.733 kb on + strand at 1627.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,626,181 - -0.3 1,626,262 - +0.3 1,626,262 - +0.4 1,626,262 - -0.3 1,626,262 - -0.1 1,626,262 - -1.9 1,626,287 - +0.1 1,626,287 - -0.4 1,626,287 - -0.2 1,626,287 - +1.2 1,626,287 - -0.1 1,626,287 - +0.2 1,626,287 - -0.3 1,626,287 - +0.3 1,626,289 - -0.8 1,626,289 - -0.1 1,626,374 + +0.2 1,626,374 + -1.1 1,626,375 - +0.4 1,626,375 - -0.7 1,626,375 - +1.1 1,626,375 - +0.1 1,626,375 - -0.1 1,626,386 - +0.3 1,626,386 - -0.3 1,626,386 - -0.1 1,626,386 - -0.2 1,626,386 - +0.5 1,626,461 + A4249_RS08090 0.14 -1.4 1,626,461 + A4249_RS08090 0.14 -0.5 1,626,461 + A4249_RS08090 0.14 -0.1 1,626,461 + A4249_RS08090 0.14 +0.0 1,626,461 + A4249_RS08090 0.14 -0.6 1,626,461 + A4249_RS08090 0.14 -0.4 1,626,462 - A4249_RS08090 0.14 +0.7 1,626,462 - A4249_RS08090 0.14 -0.1 1,626,462 - A4249_RS08090 0.14 +0.6 1,626,462 - A4249_RS08090 0.14 +0.2 1,626,462 - A4249_RS08090 0.14 -0.1 1,626,462 - A4249_RS08090 0.14 -0.1 1,626,560 + A4249_RS08090 0.32 -1.3 1,626,560 + A4249_RS08090 0.32 +0.5 1,626,617 + A4249_RS08090 0.42 -0.0 1,626,728 + A4249_RS08090 0.62 -0.3 1,626,728 + A4249_RS08090 0.62 -0.2 1,626,728 + A4249_RS08090 0.62 -0.0 1,626,728 + A4249_RS08090 0.62 +0.4 1,626,729 - A4249_RS08090 0.62 -1.7 1,626,729 - A4249_RS08090 0.62 -0.6 1,626,729 - A4249_RS08090 0.62 -0.4 1,626,818 + A4249_RS08090 0.78 -0.4 1,626,849 - A4249_RS08090 0.84 -0.2 1,626,976 + +0.3 1,626,977 - -1.5 1,626,977 - +0.7 1,627,000 + -0.0 1,627,000 + +0.1 1,627,000 + +0.2 1,627,157 + +0.0 1,627,157 + -0.1 1,627,158 - +0.5 1,627,158 - +0.2 1,627,158 - +0.8 1,627,158 - -0.1 1,627,158 - -0.8 1,627,295 + -0.9 1,627,295 + -0.4 1,627,295 + -0.3 1,627,295 + +0.6 1,627,295 + +0.1 1,627,471 + A4249_RS16615 0.42 -0.2 1,627,475 - A4249_RS16615 0.44 -0.2 1,627,733 + +0.4 1,627,733 + +0.5 1,627,733 + -0.3 1,627,734 - -0.3
Or see this region's nucleotide sequence