Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06870 and A4249_RS16540 are separated by 23 nucleotides A4249_RS16540 and A4249_RS06875 are separated by 3 nucleotides A4249_RS06875 and A4249_RS16545 overlap by 4 nucleotides A4249_RS16545 and A4249_RS06880 are separated by 187 nucleotides A4249_RS06880 and A4249_RS06885 overlap by 4 nucleotides A4249_RS06885 and A4249_RS06890 are separated by 7 nucleotides
A4249_RS06870: A4249_RS06870 - hypothetical protein, at 1,397,398 to 1,397,994
_RS06870
A4249_RS16540: A4249_RS16540 - hypothetical protein, at 1,398,018 to 1,398,158
_RS16540
A4249_RS06875: A4249_RS06875 - hypothetical protein, at 1,398,162 to 1,398,521
_RS06875
A4249_RS16545: A4249_RS16545 - hypothetical protein, at 1,398,518 to 1,398,676
_RS16545
A4249_RS06880: A4249_RS06880 - hypothetical protein, at 1,398,864 to 1,399,205
_RS06880
A4249_RS06885: A4249_RS06885 - hypothetical protein, at 1,399,202 to 1,399,717
_RS06885
A4249_RS06890: A4249_RS06890 - sulfotransferase domain-containing protein, at 1,399,725 to 1,400,309
_RS06890
Position (kb) 1398
1399
1400 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1397.930 kb on + strand, within A4249_RS06870 at 1397.962 kb on + strand at 1397.962 kb on + strand at 1397.963 kb on - strand at 1397.963 kb on - strand at 1397.992 kb on + strand at 1397.992 kb on + strand at 1397.993 kb on - strand at 1398.109 kb on + strand, within A4249_RS16540 at 1398.109 kb on + strand, within A4249_RS16540 at 1398.109 kb on + strand, within A4249_RS16540 at 1398.109 kb on + strand, within A4249_RS16540 at 1398.109 kb on + strand, within A4249_RS16540 at 1398.109 kb on + strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.110 kb on - strand, within A4249_RS16540 at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.193 kb on + strand at 1398.194 kb on - strand at 1398.194 kb on - strand at 1398.194 kb on - strand at 1398.194 kb on - strand at 1398.194 kb on - strand at 1398.410 kb on + strand, within A4249_RS06875 at 1398.410 kb on + strand, within A4249_RS06875 at 1398.410 kb on + strand, within A4249_RS06875 at 1398.410 kb on + strand, within A4249_RS06875 at 1398.410 kb on + strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.411 kb on - strand, within A4249_RS06875 at 1398.519 kb on + strand at 1398.520 kb on - strand at 1398.520 kb on - strand at 1398.644 kb on + strand, within A4249_RS16545 at 1398.644 kb on + strand, within A4249_RS16545 at 1398.644 kb on + strand, within A4249_RS16545 at 1398.645 kb on - strand, within A4249_RS16545 at 1398.645 kb on - strand, within A4249_RS16545 at 1398.645 kb on - strand, within A4249_RS16545 at 1398.645 kb on - strand, within A4249_RS16545 at 1398.851 kb on - strand at 1398.851 kb on - strand at 1398.946 kb on - strand, within A4249_RS06880 at 1398.946 kb on - strand, within A4249_RS06880 at 1399.153 kb on + strand, within A4249_RS06880 at 1399.295 kb on + strand, within A4249_RS06885 at 1399.295 kb on + strand, within A4249_RS06885 at 1399.295 kb on + strand, within A4249_RS06885 at 1399.295 kb on + strand, within A4249_RS06885 at 1399.295 kb on + strand, within A4249_RS06885 at 1399.296 kb on - strand, within A4249_RS06885 at 1399.296 kb on - strand, within A4249_RS06885 at 1399.296 kb on - strand, within A4249_RS06885 at 1399.296 kb on - strand, within A4249_RS06885 at 1399.296 kb on - strand, within A4249_RS06885 at 1399.326 kb on + strand, within A4249_RS06885 at 1399.327 kb on - strand, within A4249_RS06885 at 1399.327 kb on - strand, within A4249_RS06885 at 1399.327 kb on - strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.414 kb on + strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.415 kb on - strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.599 kb on + strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.600 kb on - strand, within A4249_RS06885 at 1399.687 kb on + strand at 1399.687 kb on + strand at 1399.687 kb on + strand at 1399.687 kb on + strand at 1399.687 kb on + strand at 1399.687 kb on + strand at 1399.688 kb on - strand at 1399.688 kb on - strand at 1399.688 kb on - strand at 1399.688 kb on - strand at 1399.688 kb on - strand at 1399.726 kb on + strand at 1399.727 kb on - strand at 1399.727 kb on - strand at 1399.733 kb on - strand at 1399.751 kb on - strand at 1399.815 kb on + strand, within A4249_RS06890 at 1399.815 kb on + strand, within A4249_RS06890 at 1399.815 kb on + strand, within A4249_RS06890 at 1399.816 kb on - strand, within A4249_RS06890 at 1399.879 kb on - strand, within A4249_RS06890 at 1399.879 kb on - strand, within A4249_RS06890 at 1400.041 kb on + strand, within A4249_RS06890 at 1400.062 kb on + strand, within A4249_RS06890 at 1400.063 kb on - strand, within A4249_RS06890 at 1400.094 kb on + strand, within A4249_RS06890 at 1400.094 kb on + strand, within A4249_RS06890 at 1400.095 kb on - strand, within A4249_RS06890 at 1400.105 kb on + strand, within A4249_RS06890 at 1400.105 kb on + strand, within A4249_RS06890 at 1400.106 kb on - strand, within A4249_RS06890 at 1400.106 kb on - strand, within A4249_RS06890 at 1400.106 kb on - strand, within A4249_RS06890 at 1400.106 kb on - strand, within A4249_RS06890 at 1400.133 kb on - strand, within A4249_RS06890 at 1400.133 kb on - strand, within A4249_RS06890 at 1400.181 kb on + strand, within A4249_RS06890 at 1400.187 kb on + strand, within A4249_RS06890 at 1400.187 kb on + strand, within A4249_RS06890 at 1400.187 kb on + strand, within A4249_RS06890 at 1400.188 kb on - strand, within A4249_RS06890 at 1400.188 kb on - strand, within A4249_RS06890 at 1400.188 kb on - strand, within A4249_RS06890
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,397,930 + A4249_RS06870 0.89 +0.0 1,397,962 + +1.1 1,397,962 + -0.4 1,397,963 - -0.1 1,397,963 - +1.3 1,397,992 + -0.3 1,397,992 + -0.2 1,397,993 - +0.3 1,398,109 + A4249_RS16540 0.65 +0.1 1,398,109 + A4249_RS16540 0.65 -0.1 1,398,109 + A4249_RS16540 0.65 -1.1 1,398,109 + A4249_RS16540 0.65 -0.6 1,398,109 + A4249_RS16540 0.65 -0.4 1,398,109 + A4249_RS16540 0.65 -1.4 1,398,110 - A4249_RS16540 0.65 +1.6 1,398,110 - A4249_RS16540 0.65 +0.0 1,398,110 - A4249_RS16540 0.65 +0.1 1,398,110 - A4249_RS16540 0.65 +0.3 1,398,110 - A4249_RS16540 0.65 +0.4 1,398,110 - A4249_RS16540 0.65 +0.5 1,398,110 - A4249_RS16540 0.65 +0.7 1,398,193 + -0.2 1,398,193 + -0.4 1,398,193 + -0.9 1,398,193 + +0.3 1,398,193 + -1.6 1,398,193 + +0.3 1,398,193 + +0.1 1,398,193 + -0.5 1,398,194 - -0.2 1,398,194 - +1.0 1,398,194 - -0.1 1,398,194 - +0.1 1,398,194 - +0.2 1,398,410 + A4249_RS06875 0.69 +0.2 1,398,410 + A4249_RS06875 0.69 -0.7 1,398,410 + A4249_RS06875 0.69 -1.6 1,398,410 + A4249_RS06875 0.69 +0.0 1,398,410 + A4249_RS06875 0.69 -0.6 1,398,411 - A4249_RS06875 0.69 -1.0 1,398,411 - A4249_RS06875 0.69 +0.6 1,398,411 - A4249_RS06875 0.69 -0.6 1,398,411 - A4249_RS06875 0.69 +0.8 1,398,411 - A4249_RS06875 0.69 -0.1 1,398,411 - A4249_RS06875 0.69 -0.4 1,398,411 - A4249_RS06875 0.69 +0.3 1,398,411 - A4249_RS06875 0.69 +0.6 1,398,411 - A4249_RS06875 0.69 -0.2 1,398,411 - A4249_RS06875 0.69 -1.0 1,398,519 + +0.9 1,398,520 - -0.7 1,398,520 - -1.7 1,398,644 + A4249_RS16545 0.79 -2.0 1,398,644 + A4249_RS16545 0.79 -0.7 1,398,644 + A4249_RS16545 0.79 +0.2 1,398,645 - A4249_RS16545 0.80 +0.1 1,398,645 - A4249_RS16545 0.80 -1.4 1,398,645 - A4249_RS16545 0.80 -0.1 1,398,645 - A4249_RS16545 0.80 +0.3 1,398,851 - -0.0 1,398,851 - -0.1 1,398,946 - A4249_RS06880 0.24 -0.2 1,398,946 - A4249_RS06880 0.24 -0.3 1,399,153 + A4249_RS06880 0.85 -0.8 1,399,295 + A4249_RS06885 0.18 -0.4 1,399,295 + A4249_RS06885 0.18 +0.1 1,399,295 + A4249_RS06885 0.18 -0.2 1,399,295 + A4249_RS06885 0.18 +0.3 1,399,295 + A4249_RS06885 0.18 -0.2 1,399,296 - A4249_RS06885 0.18 +0.7 1,399,296 - A4249_RS06885 0.18 -0.2 1,399,296 - A4249_RS06885 0.18 -0.4 1,399,296 - A4249_RS06885 0.18 +0.4 1,399,296 - A4249_RS06885 0.18 -0.1 1,399,326 + A4249_RS06885 0.24 -0.4 1,399,327 - A4249_RS06885 0.24 +0.4 1,399,327 - A4249_RS06885 0.24 +0.1 1,399,327 - A4249_RS06885 0.24 -0.0 1,399,414 + A4249_RS06885 0.41 -0.9 1,399,414 + A4249_RS06885 0.41 +0.8 1,399,414 + A4249_RS06885 0.41 +0.0 1,399,414 + A4249_RS06885 0.41 -0.3 1,399,414 + A4249_RS06885 0.41 -0.5 1,399,414 + A4249_RS06885 0.41 +0.2 1,399,414 + A4249_RS06885 0.41 +0.3 1,399,414 + A4249_RS06885 0.41 -0.2 1,399,414 + A4249_RS06885 0.41 -0.2 1,399,414 + A4249_RS06885 0.41 -0.1 1,399,414 + A4249_RS06885 0.41 +0.5 1,399,414 + A4249_RS06885 0.41 -0.1 1,399,414 + A4249_RS06885 0.41 -1.8 1,399,414 + A4249_RS06885 0.41 +0.6 1,399,414 + A4249_RS06885 0.41 -1.8 1,399,414 + A4249_RS06885 0.41 +1.0 1,399,415 - A4249_RS06885 0.41 -0.1 1,399,415 - A4249_RS06885 0.41 +0.9 1,399,415 - A4249_RS06885 0.41 -0.9 1,399,415 - A4249_RS06885 0.41 -0.4 1,399,415 - A4249_RS06885 0.41 +0.5 1,399,415 - A4249_RS06885 0.41 +0.2 1,399,415 - A4249_RS06885 0.41 -0.3 1,399,415 - A4249_RS06885 0.41 +1.0 1,399,415 - A4249_RS06885 0.41 -0.3 1,399,415 - A4249_RS06885 0.41 -0.0 1,399,415 - A4249_RS06885 0.41 -0.0 1,399,415 - A4249_RS06885 0.41 +1.0 1,399,415 - A4249_RS06885 0.41 -0.2 1,399,415 - A4249_RS06885 0.41 +0.3 1,399,415 - A4249_RS06885 0.41 -0.9 1,399,415 - A4249_RS06885 0.41 +0.4 1,399,415 - A4249_RS06885 0.41 +0.4 1,399,415 - A4249_RS06885 0.41 -0.6 1,399,415 - A4249_RS06885 0.41 -0.3 1,399,415 - A4249_RS06885 0.41 +1.0 1,399,415 - A4249_RS06885 0.41 -0.5 1,399,415 - A4249_RS06885 0.41 -0.8 1,399,415 - A4249_RS06885 0.41 -2.0 1,399,599 + A4249_RS06885 0.77 +0.2 1,399,599 + A4249_RS06885 0.77 -0.1 1,399,599 + A4249_RS06885 0.77 -0.7 1,399,599 + A4249_RS06885 0.77 +0.4 1,399,599 + A4249_RS06885 0.77 +0.4 1,399,599 + A4249_RS06885 0.77 -0.5 1,399,599 + A4249_RS06885 0.77 +0.4 1,399,599 + A4249_RS06885 0.77 +0.3 1,399,599 + A4249_RS06885 0.77 -0.8 1,399,599 + A4249_RS06885 0.77 -1.4 1,399,600 - A4249_RS06885 0.77 -1.5 1,399,600 - A4249_RS06885 0.77 -1.2 1,399,600 - A4249_RS06885 0.77 -0.9 1,399,600 - A4249_RS06885 0.77 -1.4 1,399,600 - A4249_RS06885 0.77 +0.2 1,399,600 - A4249_RS06885 0.77 +0.2 1,399,600 - A4249_RS06885 0.77 +0.2 1,399,600 - A4249_RS06885 0.77 -0.4 1,399,600 - A4249_RS06885 0.77 -0.1 1,399,687 + -0.1 1,399,687 + +0.2 1,399,687 + +0.3 1,399,687 + +0.1 1,399,687 + +0.0 1,399,687 + -0.1 1,399,688 - -0.2 1,399,688 - +0.6 1,399,688 - +0.1 1,399,688 - -0.7 1,399,688 - +0.6 1,399,726 + -0.4 1,399,727 - -2.6 1,399,727 - -1.1 1,399,733 - +0.4 1,399,751 - -0.2 1,399,815 + A4249_RS06890 0.15 -0.8 1,399,815 + A4249_RS06890 0.15 +0.5 1,399,815 + A4249_RS06890 0.15 +1.2 1,399,816 - A4249_RS06890 0.16 +0.6 1,399,879 - A4249_RS06890 0.26 -0.6 1,399,879 - A4249_RS06890 0.26 +0.5 1,400,041 + A4249_RS06890 0.54 -0.3 1,400,062 + A4249_RS06890 0.58 +0.9 1,400,063 - A4249_RS06890 0.58 -0.0 1,400,094 + A4249_RS06890 0.63 +2.0 1,400,094 + A4249_RS06890 0.63 +0.6 1,400,095 - A4249_RS06890 0.63 +1.4 1,400,105 + A4249_RS06890 0.65 +0.0 1,400,105 + A4249_RS06890 0.65 -0.8 1,400,106 - A4249_RS06890 0.65 +0.3 1,400,106 - A4249_RS06890 0.65 -0.3 1,400,106 - A4249_RS06890 0.65 +0.0 1,400,106 - A4249_RS06890 0.65 +0.6 1,400,133 - A4249_RS06890 0.70 +0.3 1,400,133 - A4249_RS06890 0.70 -0.7 1,400,181 + A4249_RS06890 0.78 -0.3 1,400,187 + A4249_RS06890 0.79 -0.3 1,400,187 + A4249_RS06890 0.79 +0.0 1,400,187 + A4249_RS06890 0.79 -2.3 1,400,188 - A4249_RS06890 0.79 -0.1 1,400,188 - A4249_RS06890 0.79 -0.4 1,400,188 - A4249_RS06890 0.79 -0.3
Or see this region's nucleotide sequence