Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06705

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06695 and A4249_RS06700 are separated by 48 nucleotidesA4249_RS06700 and A4249_RS06705 are separated by 72 nucleotidesA4249_RS06705 and A4249_RS06710 are separated by 120 nucleotides A4249_RS06695: A4249_RS06695 - prolyl aminopeptidase, at 1,363,936 to 1,364,916 _RS06695 A4249_RS06700: A4249_RS06700 - DoxX family protein, at 1,364,965 to 1,365,363 _RS06700 A4249_RS06705: A4249_RS06705 - pirin family protein, at 1,365,436 to 1,366,134 _RS06705 A4249_RS06710: A4249_RS06710 - LysR family transcriptional regulator, at 1,366,255 to 1,367,181 _RS06710 Position (kb) 1365 1366 1367Strain fitness (log2 ratio) -2 -1 0 1at 1364.494 kb on + strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.495 kb on - strand, within A4249_RS06695at 1364.497 kb on + strand, within A4249_RS06695at 1364.497 kb on + strand, within A4249_RS06695at 1364.497 kb on + strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.498 kb on - strand, within A4249_RS06695at 1364.709 kb on + strand, within A4249_RS06695at 1364.710 kb on - strand, within A4249_RS06695at 1364.727 kb on + strand, within A4249_RS06695at 1364.727 kb on + strand, within A4249_RS06695at 1364.728 kb on - strand, within A4249_RS06695at 1364.728 kb on - strand, within A4249_RS06695at 1364.728 kb on - strand, within A4249_RS06695at 1364.947 kb on + strandat 1364.959 kb on + strandat 1364.959 kb on + strandat 1364.959 kb on + strandat 1364.959 kb on + strandat 1364.960 kb on - strandat 1365.026 kb on + strand, within A4249_RS06700at 1365.026 kb on + strand, within A4249_RS06700at 1365.026 kb on + strand, within A4249_RS06700at 1365.026 kb on + strand, within A4249_RS06700at 1365.026 kb on + strand, within A4249_RS06700at 1365.026 kb on + strand, within A4249_RS06700at 1365.026 kb on + strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.027 kb on - strand, within A4249_RS06700at 1365.044 kb on + strand, within A4249_RS06700at 1365.044 kb on + strand, within A4249_RS06700at 1365.045 kb on - strand, within A4249_RS06700at 1365.045 kb on - strand, within A4249_RS06700at 1365.045 kb on - strand, within A4249_RS06700at 1365.045 kb on - strand, within A4249_RS06700at 1365.111 kb on - strand, within A4249_RS06700at 1365.111 kb on - strand, within A4249_RS06700at 1365.111 kb on - strand, within A4249_RS06700at 1365.111 kb on - strand, within A4249_RS06700at 1365.575 kb on + strand, within A4249_RS06705at 1365.575 kb on + strand, within A4249_RS06705at 1365.576 kb on - strand, within A4249_RS06705at 1365.576 kb on - strand, within A4249_RS06705at 1365.602 kb on + strand, within A4249_RS06705at 1365.704 kb on - strand, within A4249_RS06705at 1365.704 kb on - strand, within A4249_RS06705at 1365.824 kb on + strand, within A4249_RS06705at 1365.825 kb on - strand, within A4249_RS06705at 1365.825 kb on - strand, within A4249_RS06705at 1365.825 kb on - strand, within A4249_RS06705at 1365.825 kb on - strand, within A4249_RS06705at 1365.825 kb on - strand, within A4249_RS06705at 1365.935 kb on + strand, within A4249_RS06705at 1365.935 kb on + strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1365.936 kb on - strand, within A4249_RS06705at 1366.046 kb on + strand, within A4249_RS06705at 1366.046 kb on + strand, within A4249_RS06705at 1366.046 kb on + strand, within A4249_RS06705at 1366.046 kb on + strand, within A4249_RS06705at 1366.046 kb on + strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.047 kb on - strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.049 kb on + strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.050 kb on - strand, within A4249_RS06705at 1366.188 kb on + strandat 1366.188 kb on + strandat 1366.188 kb on + strandat 1366.189 kb on - strandat 1366.189 kb on - strandat 1366.189 kb on - strandat 1366.213 kb on - strandat 1366.283 kb on + strandat 1366.284 kb on - strandat 1366.346 kb on + strandat 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.579 kb on + strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.580 kb on - strand, within A4249_RS06710at 1366.664 kb on + strand, within A4249_RS06710at 1366.665 kb on - strand, within A4249_RS06710at 1366.665 kb on - strand, within A4249_RS06710at 1366.665 kb on - strand, within A4249_RS06710at 1366.746 kb on - strand, within A4249_RS06710at 1366.746 kb on - strand, within A4249_RS06710at 1366.746 kb on - strand, within A4249_RS06710at 1366.774 kb on + strand, within A4249_RS06710at 1366.774 kb on + strand, within A4249_RS06710at 1366.774 kb on + strand, within A4249_RS06710at 1366.775 kb on - strand, within A4249_RS06710at 1366.837 kb on + strand, within A4249_RS06710at 1366.838 kb on - strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.843 kb on + strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.844 kb on - strand, within A4249_RS06710at 1366.973 kb on + strand, within A4249_RS06710at 1366.973 kb on + strand, within A4249_RS06710at 1366.973 kb on + strand, within A4249_RS06710at 1366.973 kb on + strand, within A4249_RS06710at 1366.974 kb on - strand, within A4249_RS06710at 1366.974 kb on - strand, within A4249_RS06710at 1366.996 kb on + strand, within A4249_RS06710at 1366.996 kb on + strand, within A4249_RS06710at 1366.996 kb on + strand, within A4249_RS06710at 1366.996 kb on + strand, within A4249_RS06710at 1366.996 kb on + strand, within A4249_RS06710at 1366.997 kb on - strand, within A4249_RS06710at 1366.997 kb on - strand, within A4249_RS06710at 1366.997 kb on - strand, within A4249_RS06710at 1367.125 kb on + strandat 1367.125 kb on + strandat 1367.125 kb on + strandat 1367.125 kb on + strandat 1367.126 kb on - strandat 1367.126 kb on - strandat 1367.126 kb on - strandat 1367.126 kb on - strandat 1367.126 kb on - strandat 1367.126 kb on - strandat 1367.126 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,364,494 + A4249_RS06695 0.57 -0.3
1,364,495 - A4249_RS06695 0.57 -0.5
1,364,495 - A4249_RS06695 0.57 -1.7
1,364,495 - A4249_RS06695 0.57 -1.0
1,364,495 - A4249_RS06695 0.57 -0.8
1,364,495 - A4249_RS06695 0.57 -0.9
1,364,495 - A4249_RS06695 0.57 -0.1
1,364,495 - A4249_RS06695 0.57 +0.8
1,364,497 + A4249_RS06695 0.57 +0.4
1,364,497 + A4249_RS06695 0.57 -0.2
1,364,497 + A4249_RS06695 0.57 -0.2
1,364,498 - A4249_RS06695 0.57 +1.6
1,364,498 - A4249_RS06695 0.57 +0.2
1,364,498 - A4249_RS06695 0.57 +1.6
1,364,498 - A4249_RS06695 0.57 +0.2
1,364,498 - A4249_RS06695 0.57 -0.6
1,364,498 - A4249_RS06695 0.57 -0.9
1,364,498 - A4249_RS06695 0.57 -0.3
1,364,709 + A4249_RS06695 0.79 -0.7
1,364,710 - A4249_RS06695 0.79 +0.1
1,364,727 + A4249_RS06695 0.81 -0.4
1,364,727 + A4249_RS06695 0.81 +0.0
1,364,728 - A4249_RS06695 0.81 -0.6
1,364,728 - A4249_RS06695 0.81 +0.1
1,364,728 - A4249_RS06695 0.81 +0.1
1,364,947 + +0.6
1,364,959 + -0.1
1,364,959 + +0.0
1,364,959 + -1.0
1,364,959 + -0.5
1,364,960 - +1.1
1,365,026 + A4249_RS06700 0.15 +0.2
1,365,026 + A4249_RS06700 0.15 +1.1
1,365,026 + A4249_RS06700 0.15 -0.7
1,365,026 + A4249_RS06700 0.15 -0.2
1,365,026 + A4249_RS06700 0.15 -0.5
1,365,026 + A4249_RS06700 0.15 +0.4
1,365,026 + A4249_RS06700 0.15 +0.0
1,365,027 - A4249_RS06700 0.16 -0.2
1,365,027 - A4249_RS06700 0.16 +0.1
1,365,027 - A4249_RS06700 0.16 -0.3
1,365,027 - A4249_RS06700 0.16 -0.9
1,365,027 - A4249_RS06700 0.16 +0.2
1,365,027 - A4249_RS06700 0.16 +0.0
1,365,027 - A4249_RS06700 0.16 -0.6
1,365,027 - A4249_RS06700 0.16 -0.1
1,365,044 + A4249_RS06700 0.20 +0.5
1,365,044 + A4249_RS06700 0.20 -0.2
1,365,045 - A4249_RS06700 0.20 +0.6
1,365,045 - A4249_RS06700 0.20 +0.4
1,365,045 - A4249_RS06700 0.20 +0.1
1,365,045 - A4249_RS06700 0.20 -0.0
1,365,111 - A4249_RS06700 0.37 -0.2
1,365,111 - A4249_RS06700 0.37 +1.0
1,365,111 - A4249_RS06700 0.37 +0.3
1,365,111 - A4249_RS06700 0.37 +0.2
1,365,575 + A4249_RS06705 0.20 -0.7
1,365,575 + A4249_RS06705 0.20 -0.6
1,365,576 - A4249_RS06705 0.20 +0.5
1,365,576 - A4249_RS06705 0.20 -0.4
1,365,602 + A4249_RS06705 0.24 +0.2
1,365,704 - A4249_RS06705 0.38 +0.2
1,365,704 - A4249_RS06705 0.38 +0.3
1,365,824 + A4249_RS06705 0.56 -0.1
1,365,825 - A4249_RS06705 0.56 +0.2
1,365,825 - A4249_RS06705 0.56 +0.2
1,365,825 - A4249_RS06705 0.56 -0.5
1,365,825 - A4249_RS06705 0.56 +0.9
1,365,825 - A4249_RS06705 0.56 -1.1
1,365,935 + A4249_RS06705 0.71 -1.1
1,365,935 + A4249_RS06705 0.71 -1.0
1,365,936 - A4249_RS06705 0.72 +0.1
1,365,936 - A4249_RS06705 0.72 +0.1
1,365,936 - A4249_RS06705 0.72 -0.0
1,365,936 - A4249_RS06705 0.72 -0.8
1,365,936 - A4249_RS06705 0.72 -0.1
1,365,936 - A4249_RS06705 0.72 +0.5
1,365,936 - A4249_RS06705 0.72 +0.4
1,365,936 - A4249_RS06705 0.72 +0.5
1,366,046 + A4249_RS06705 0.87 -0.5
1,366,046 + A4249_RS06705 0.87 -0.2
1,366,046 + A4249_RS06705 0.87 -0.3
1,366,046 + A4249_RS06705 0.87 -0.5
1,366,046 + A4249_RS06705 0.87 +0.2
1,366,047 - A4249_RS06705 0.87 -2.5
1,366,047 - A4249_RS06705 0.87 -0.4
1,366,047 - A4249_RS06705 0.87 -0.2
1,366,047 - A4249_RS06705 0.87 +0.2
1,366,047 - A4249_RS06705 0.87 -0.3
1,366,047 - A4249_RS06705 0.87 +0.3
1,366,047 - A4249_RS06705 0.87 -0.3
1,366,049 + A4249_RS06705 0.88 -0.5
1,366,049 + A4249_RS06705 0.88 +0.3
1,366,049 + A4249_RS06705 0.88 +0.8
1,366,049 + A4249_RS06705 0.88 +0.3
1,366,049 + A4249_RS06705 0.88 +0.4
1,366,049 + A4249_RS06705 0.88 -0.7
1,366,049 + A4249_RS06705 0.88 +0.3
1,366,050 - A4249_RS06705 0.88 +1.0
1,366,050 - A4249_RS06705 0.88 -0.6
1,366,050 - A4249_RS06705 0.88 +0.1
1,366,050 - A4249_RS06705 0.88 -0.4
1,366,050 - A4249_RS06705 0.88 -0.9
1,366,050 - A4249_RS06705 0.88 -0.1
1,366,050 - A4249_RS06705 0.88 -2.5
1,366,050 - A4249_RS06705 0.88 +0.6
1,366,050 - A4249_RS06705 0.88 -0.1
1,366,050 - A4249_RS06705 0.88 +0.4
1,366,050 - A4249_RS06705 0.88 -0.0
1,366,050 - A4249_RS06705 0.88 -0.7
1,366,050 - A4249_RS06705 0.88 -0.4
1,366,188 + -0.2
1,366,188 + +0.7
1,366,188 + -0.1
1,366,189 - -0.5
1,366,189 - -0.4
1,366,189 - +0.0
1,366,213 - +1.0
1,366,283 + -0.2
1,366,284 - -1.2
1,366,346 + +0.4
1,366,579 + A4249_RS06710 0.35 -0.2
1,366,579 + A4249_RS06710 0.35 +0.0
1,366,579 + A4249_RS06710 0.35 +0.3
1,366,579 + A4249_RS06710 0.35 -0.2
1,366,579 + A4249_RS06710 0.35 +0.5
1,366,579 + A4249_RS06710 0.35 -1.6
1,366,579 + A4249_RS06710 0.35 -0.1
1,366,579 + A4249_RS06710 0.35 +0.1
1,366,579 + A4249_RS06710 0.35 -0.5
1,366,580 - A4249_RS06710 0.35 -0.5
1,366,580 - A4249_RS06710 0.35 +0.5
1,366,580 - A4249_RS06710 0.35 +0.1
1,366,580 - A4249_RS06710 0.35 -0.2
1,366,580 - A4249_RS06710 0.35 -0.9
1,366,580 - A4249_RS06710 0.35 -0.2
1,366,580 - A4249_RS06710 0.35 -0.9
1,366,580 - A4249_RS06710 0.35 -0.5
1,366,664 + A4249_RS06710 0.44 -0.5
1,366,665 - A4249_RS06710 0.44 +1.5
1,366,665 - A4249_RS06710 0.44 -0.1
1,366,665 - A4249_RS06710 0.44 -0.3
1,366,746 - A4249_RS06710 0.53 -0.3
1,366,746 - A4249_RS06710 0.53 +0.3
1,366,746 - A4249_RS06710 0.53 -0.6
1,366,774 + A4249_RS06710 0.56 +0.1
1,366,774 + A4249_RS06710 0.56 +0.6
1,366,774 + A4249_RS06710 0.56 -0.3
1,366,775 - A4249_RS06710 0.56 +0.5
1,366,837 + A4249_RS06710 0.63 +1.3
1,366,838 - A4249_RS06710 0.63 -0.7
1,366,843 + A4249_RS06710 0.63 -0.5
1,366,843 + A4249_RS06710 0.63 +0.8
1,366,843 + A4249_RS06710 0.63 -0.1
1,366,843 + A4249_RS06710 0.63 +0.4
1,366,843 + A4249_RS06710 0.63 -0.0
1,366,843 + A4249_RS06710 0.63 -0.1
1,366,843 + A4249_RS06710 0.63 -0.8
1,366,843 + A4249_RS06710 0.63 -1.1
1,366,843 + A4249_RS06710 0.63 +1.5
1,366,843 + A4249_RS06710 0.63 +0.4
1,366,844 - A4249_RS06710 0.64 +0.8
1,366,844 - A4249_RS06710 0.64 +0.8
1,366,844 - A4249_RS06710 0.64 -0.7
1,366,844 - A4249_RS06710 0.64 +0.1
1,366,844 - A4249_RS06710 0.64 -1.6
1,366,844 - A4249_RS06710 0.64 +0.6
1,366,844 - A4249_RS06710 0.64 -0.9
1,366,844 - A4249_RS06710 0.64 +0.2
1,366,844 - A4249_RS06710 0.64 +0.5
1,366,844 - A4249_RS06710 0.64 +0.2
1,366,844 - A4249_RS06710 0.64 +0.3
1,366,844 - A4249_RS06710 0.64 -0.1
1,366,844 - A4249_RS06710 0.64 -1.0
1,366,844 - A4249_RS06710 0.64 -0.6
1,366,844 - A4249_RS06710 0.64 -0.5
1,366,973 + A4249_RS06710 0.77 -0.3
1,366,973 + A4249_RS06710 0.77 -0.2
1,366,973 + A4249_RS06710 0.77 -0.3
1,366,973 + A4249_RS06710 0.77 +0.0
1,366,974 - A4249_RS06710 0.78 +0.1
1,366,974 - A4249_RS06710 0.78 -0.0
1,366,996 + A4249_RS06710 0.80 -0.7
1,366,996 + A4249_RS06710 0.80 -0.7
1,366,996 + A4249_RS06710 0.80 +0.2
1,366,996 + A4249_RS06710 0.80 -2.6
1,366,996 + A4249_RS06710 0.80 -0.5
1,366,997 - A4249_RS06710 0.80 -0.2
1,366,997 - A4249_RS06710 0.80 +0.3
1,366,997 - A4249_RS06710 0.80 -0.0
1,367,125 + -0.6
1,367,125 + -0.2
1,367,125 + -0.4
1,367,125 + -0.6
1,367,126 - -0.6
1,367,126 - +0.5
1,367,126 - -0.4
1,367,126 - -0.4
1,367,126 - -0.2
1,367,126 - -0.5
1,367,126 - -0.5

Or see this region's nucleotide sequence