Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06655

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06645 and A4249_RS06650 are separated by 61 nucleotidesA4249_RS06650 and A4249_RS06655 overlap by 4 nucleotidesA4249_RS06655 and A4249_RS06660 overlap by 1 nucleotidesA4249_RS06660 and A4249_RS06665 are separated by 72 nucleotides A4249_RS06645: A4249_RS06645 - bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase, at 1,354,316 to 1,355,239 _RS06645 A4249_RS06650: A4249_RS06650 - LemA family protein, at 1,355,301 to 1,355,984 _RS06650 A4249_RS06655: A4249_RS06655 - TPM domain-containing protein, at 1,355,981 to 1,356,808 _RS06655 A4249_RS06660: A4249_RS06660 - TPM domain-containing protein, at 1,356,808 to 1,357,485 _RS06660 A4249_RS06665: A4249_RS06665 - endonuclease/exonuclease/phosphatase family protein, at 1,357,558 to 1,358,295 _RS06665 Position (kb) 1355 1356 1357Strain fitness (log2 ratio) -2 -1 0 1 2at 1355.213 kb on - strandat 1355.261 kb on + strandat 1355.261 kb on + strandat 1355.262 kb on - strandat 1355.262 kb on - strandat 1355.262 kb on - strandat 1355.262 kb on - strandat 1355.262 kb on - strandat 1355.262 kb on - strandat 1355.377 kb on - strand, within A4249_RS06650at 1355.439 kb on + strand, within A4249_RS06650at 1355.439 kb on + strand, within A4249_RS06650at 1355.440 kb on - strand, within A4249_RS06650at 1355.440 kb on - strand, within A4249_RS06650at 1355.440 kb on - strand, within A4249_RS06650at 1355.579 kb on + strand, within A4249_RS06650at 1355.601 kb on + strand, within A4249_RS06650at 1355.602 kb on - strand, within A4249_RS06650at 1355.665 kb on - strand, within A4249_RS06650at 1355.674 kb on + strand, within A4249_RS06650at 1355.674 kb on + strand, within A4249_RS06650at 1355.675 kb on - strand, within A4249_RS06650at 1355.675 kb on - strand, within A4249_RS06650at 1355.675 kb on - strand, within A4249_RS06650at 1355.675 kb on - strand, within A4249_RS06650at 1355.675 kb on - strand, within A4249_RS06650at 1355.675 kb on - strand, within A4249_RS06650at 1355.754 kb on + strand, within A4249_RS06650at 1355.754 kb on + strand, within A4249_RS06650at 1355.754 kb on + strand, within A4249_RS06650at 1355.754 kb on + strand, within A4249_RS06650at 1355.755 kb on - strand, within A4249_RS06650at 1355.775 kb on + strand, within A4249_RS06650at 1355.775 kb on + strand, within A4249_RS06650at 1355.776 kb on - strand, within A4249_RS06650at 1355.776 kb on - strand, within A4249_RS06650at 1355.776 kb on - strand, within A4249_RS06650at 1355.776 kb on - strand, within A4249_RS06650at 1355.776 kb on - strand, within A4249_RS06650at 1355.904 kb on - strand, within A4249_RS06650at 1355.904 kb on - strand, within A4249_RS06650at 1356.254 kb on + strand, within A4249_RS06655at 1356.254 kb on + strand, within A4249_RS06655at 1356.254 kb on + strand, within A4249_RS06655at 1356.255 kb on - strand, within A4249_RS06655at 1356.255 kb on - strand, within A4249_RS06655at 1356.255 kb on - strand, within A4249_RS06655at 1356.255 kb on - strand, within A4249_RS06655at 1356.255 kb on - strand, within A4249_RS06655at 1356.255 kb on - strand, within A4249_RS06655at 1356.362 kb on + strand, within A4249_RS06655at 1356.446 kb on + strand, within A4249_RS06655at 1356.447 kb on - strand, within A4249_RS06655at 1356.447 kb on - strand, within A4249_RS06655at 1356.603 kb on + strand, within A4249_RS06655at 1356.604 kb on - strand, within A4249_RS06655at 1356.604 kb on - strand, within A4249_RS06655at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1357.072 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.300 kb on + strand, within A4249_RS06660at 1357.300 kb on + strand, within A4249_RS06660at 1357.301 kb on - strand, within A4249_RS06660at 1357.301 kb on - strand, within A4249_RS06660at 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.573 kb on - strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.577 kb on - strandat 1357.577 kb on - strandat 1357.577 kb on - strandat 1357.577 kb on - strandat 1357.789 kb on + strand, within A4249_RS06665

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,355,213 - -1.4
1,355,261 + +0.6
1,355,261 + +0.9
1,355,262 - +1.6
1,355,262 - +0.4
1,355,262 - +0.2
1,355,262 - -0.3
1,355,262 - -0.4
1,355,262 - +0.1
1,355,377 - A4249_RS06650 0.11 -0.9
1,355,439 + A4249_RS06650 0.20 +0.2
1,355,439 + A4249_RS06650 0.20 +0.0
1,355,440 - A4249_RS06650 0.20 -0.5
1,355,440 - A4249_RS06650 0.20 -0.6
1,355,440 - A4249_RS06650 0.20 +1.1
1,355,579 + A4249_RS06650 0.41 -0.4
1,355,601 + A4249_RS06650 0.44 -0.2
1,355,602 - A4249_RS06650 0.44 -0.5
1,355,665 - A4249_RS06650 0.53 +0.1
1,355,674 + A4249_RS06650 0.55 -0.5
1,355,674 + A4249_RS06650 0.55 -0.5
1,355,675 - A4249_RS06650 0.55 +0.2
1,355,675 - A4249_RS06650 0.55 -0.7
1,355,675 - A4249_RS06650 0.55 +0.8
1,355,675 - A4249_RS06650 0.55 +1.3
1,355,675 - A4249_RS06650 0.55 -0.2
1,355,675 - A4249_RS06650 0.55 +0.5
1,355,754 + A4249_RS06650 0.66 -0.2
1,355,754 + A4249_RS06650 0.66 +0.0
1,355,754 + A4249_RS06650 0.66 +1.6
1,355,754 + A4249_RS06650 0.66 +0.3
1,355,755 - A4249_RS06650 0.66 -0.4
1,355,775 + A4249_RS06650 0.69 -0.5
1,355,775 + A4249_RS06650 0.69 -0.6
1,355,776 - A4249_RS06650 0.69 -1.1
1,355,776 - A4249_RS06650 0.69 +0.1
1,355,776 - A4249_RS06650 0.69 -0.8
1,355,776 - A4249_RS06650 0.69 -0.1
1,355,776 - A4249_RS06650 0.69 -0.5
1,355,904 - A4249_RS06650 0.88 -0.5
1,355,904 - A4249_RS06650 0.88 -0.0
1,356,254 + A4249_RS06655 0.33 +0.4
1,356,254 + A4249_RS06655 0.33 +0.1
1,356,254 + A4249_RS06655 0.33 -0.7
1,356,255 - A4249_RS06655 0.33 -0.4
1,356,255 - A4249_RS06655 0.33 +0.4
1,356,255 - A4249_RS06655 0.33 -0.6
1,356,255 - A4249_RS06655 0.33 +1.0
1,356,255 - A4249_RS06655 0.33 +0.3
1,356,255 - A4249_RS06655 0.33 -0.9
1,356,362 + A4249_RS06655 0.46 -0.4
1,356,446 + A4249_RS06655 0.56 +0.5
1,356,447 - A4249_RS06655 0.56 +0.7
1,356,447 - A4249_RS06655 0.56 -0.3
1,356,603 + A4249_RS06655 0.75 -0.3
1,356,604 - A4249_RS06655 0.75 -0.9
1,356,604 - A4249_RS06655 0.75 +0.0
1,356,916 + A4249_RS06660 0.16 +0.1
1,356,916 + A4249_RS06660 0.16 -0.0
1,356,916 + A4249_RS06660 0.16 +0.5
1,356,916 + A4249_RS06660 0.16 -0.4
1,356,916 + A4249_RS06660 0.16 +0.1
1,356,916 + A4249_RS06660 0.16 +0.4
1,356,916 + A4249_RS06660 0.16 -0.2
1,356,916 + A4249_RS06660 0.16 +0.9
1,356,916 + A4249_RS06660 0.16 +0.4
1,356,916 + A4249_RS06660 0.16 +0.0
1,356,916 + A4249_RS06660 0.16 +0.8
1,356,916 + A4249_RS06660 0.16 -0.1
1,356,916 + A4249_RS06660 0.16 +0.5
1,356,916 + A4249_RS06660 0.16 -0.2
1,356,916 + A4249_RS06660 0.16 -1.1
1,356,916 + A4249_RS06660 0.16 +1.4
1,356,917 - A4249_RS06660 0.16 +0.5
1,356,917 - A4249_RS06660 0.16 +0.2
1,356,917 - A4249_RS06660 0.16 +0.4
1,356,917 - A4249_RS06660 0.16 -0.4
1,356,917 - A4249_RS06660 0.16 +0.2
1,356,917 - A4249_RS06660 0.16 +0.4
1,356,917 - A4249_RS06660 0.16 -0.7
1,356,917 - A4249_RS06660 0.16 -2.2
1,356,917 - A4249_RS06660 0.16 -0.1
1,356,917 - A4249_RS06660 0.16 -0.4
1,356,917 - A4249_RS06660 0.16 -1.0
1,356,917 - A4249_RS06660 0.16 +1.9
1,356,917 - A4249_RS06660 0.16 -0.1
1,356,917 - A4249_RS06660 0.16 +1.0
1,357,072 + A4249_RS06660 0.39 +0.3
1,357,269 + A4249_RS06660 0.68 +0.8
1,357,269 + A4249_RS06660 0.68 +0.3
1,357,269 + A4249_RS06660 0.68 +1.1
1,357,269 + A4249_RS06660 0.68 -0.9
1,357,269 + A4249_RS06660 0.68 -1.1
1,357,269 + A4249_RS06660 0.68 -0.1
1,357,269 + A4249_RS06660 0.68 -1.2
1,357,269 + A4249_RS06660 0.68 +0.3
1,357,269 + A4249_RS06660 0.68 -1.4
1,357,269 + A4249_RS06660 0.68 +0.4
1,357,270 - A4249_RS06660 0.68 -0.2
1,357,270 - A4249_RS06660 0.68 -0.3
1,357,270 - A4249_RS06660 0.68 -0.8
1,357,270 - A4249_RS06660 0.68 -0.5
1,357,270 - A4249_RS06660 0.68 +0.5
1,357,270 - A4249_RS06660 0.68 -0.0
1,357,270 - A4249_RS06660 0.68 +0.2
1,357,270 - A4249_RS06660 0.68 +0.7
1,357,300 + A4249_RS06660 0.73 -0.6
1,357,300 + A4249_RS06660 0.73 +0.7
1,357,301 - A4249_RS06660 0.73 -1.6
1,357,301 - A4249_RS06660 0.73 -0.2
1,357,572 + -1.2
1,357,572 + +1.6
1,357,572 + -0.3
1,357,572 + +1.6
1,357,572 + +0.4
1,357,572 + -0.1
1,357,572 + -1.7
1,357,573 - +0.8
1,357,576 + +0.4
1,357,576 + -0.2
1,357,576 + -1.2
1,357,576 + +0.6
1,357,576 + -1.7
1,357,576 + -0.4
1,357,576 + +0.9
1,357,577 - +0.5
1,357,577 - -0.7
1,357,577 - +0.4
1,357,577 - +1.6
1,357,789 + A4249_RS06665 0.31 +0.3

Or see this region's nucleotide sequence