Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06295

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06290 and A4249_RS06295 are separated by 0 nucleotidesA4249_RS06295 and A4249_RS06300 overlap by 8 nucleotides A4249_RS06290: A4249_RS06290 - peptide-methionine (S)-S-oxide reductase MsrA, at 1,283,608 to 1,284,231 _RS06290 A4249_RS06295: A4249_RS06295 - ABC transporter ATP-binding protein, at 1,284,232 to 1,284,936 _RS06295 A4249_RS06300: A4249_RS06300 - lipoprotein-releasing ABC transporter permease subunit, at 1,284,929 to 1,286,215 _RS06300 Position (kb) 1284 1285Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1283.256 kb on - strandat 1283.256 kb on - strandat 1283.256 kb on - strandat 1283.260 kb on + strandat 1283.261 kb on - strandat 1283.261 kb on - strandat 1283.261 kb on - strandat 1283.274 kb on + strandat 1283.364 kb on + strandat 1283.364 kb on + strandat 1283.364 kb on + strandat 1283.364 kb on + strandat 1283.365 kb on - strandat 1283.365 kb on - strandat 1283.365 kb on - strandat 1283.365 kb on - strandat 1283.365 kb on - strandat 1283.365 kb on - strandat 1283.373 kb on + strandat 1283.373 kb on + strandat 1283.374 kb on - strandat 1283.374 kb on - strandat 1283.426 kb on + strandat 1283.426 kb on + strandat 1283.426 kb on + strandat 1283.427 kb on - strandat 1283.427 kb on - strandat 1283.427 kb on - strandat 1283.427 kb on - strandat 1283.458 kb on + strandat 1283.458 kb on + strandat 1283.458 kb on + strandat 1283.458 kb on + strandat 1283.459 kb on - strandat 1283.459 kb on - strandat 1283.459 kb on - strandat 1283.459 kb on - strandat 1283.459 kb on - strandat 1283.459 kb on - strandat 1283.513 kb on + strandat 1283.582 kb on + strandat 1283.583 kb on - strandat 1283.583 kb on - strandat 1283.830 kb on + strand, within A4249_RS06290at 1283.830 kb on + strand, within A4249_RS06290at 1283.830 kb on + strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.831 kb on - strand, within A4249_RS06290at 1283.862 kb on + strand, within A4249_RS06290at 1283.862 kb on + strand, within A4249_RS06290at 1283.863 kb on - strand, within A4249_RS06290at 1283.863 kb on - strand, within A4249_RS06290at 1283.905 kb on + strand, within A4249_RS06290at 1283.905 kb on + strand, within A4249_RS06290at 1283.906 kb on - strand, within A4249_RS06290at 1283.986 kb on + strand, within A4249_RS06290at 1283.986 kb on + strand, within A4249_RS06290at 1283.987 kb on - strand, within A4249_RS06290at 1284.133 kb on + strand, within A4249_RS06290at 1284.134 kb on - strand, within A4249_RS06290at 1284.134 kb on - strand, within A4249_RS06290at 1284.134 kb on - strand, within A4249_RS06290at 1284.157 kb on + strand, within A4249_RS06290at 1284.157 kb on + strand, within A4249_RS06290at 1284.157 kb on + strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.158 kb on - strand, within A4249_RS06290at 1284.236 kb on + strandat 1284.237 kb on - strandat 1284.937 kb on - strandat 1284.937 kb on - strandat 1284.937 kb on - strandat 1284.937 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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1,283,256 - -0.4
1,283,256 - +0.7
1,283,256 - +0.3
1,283,260 + +2.8
1,283,261 - -0.4
1,283,261 - -0.0
1,283,261 - +0.1
1,283,274 + -0.1
1,283,364 + -0.7
1,283,364 + +0.3
1,283,364 + -0.7
1,283,364 + +0.8
1,283,365 - -1.0
1,283,365 - -0.1
1,283,365 - +0.4
1,283,365 - -0.7
1,283,365 - +0.4
1,283,365 - +0.2
1,283,373 + -0.0
1,283,373 + +0.5
1,283,374 - -0.3
1,283,374 - +0.3
1,283,426 + -0.8
1,283,426 + +0.2
1,283,426 + +0.1
1,283,427 - -0.6
1,283,427 - +0.6
1,283,427 - -0.2
1,283,427 - -0.3
1,283,458 + +1.2
1,283,458 + -0.5
1,283,458 + +0.1
1,283,458 + -0.1
1,283,459 - -1.6
1,283,459 - -1.1
1,283,459 - -0.1
1,283,459 - -0.0
1,283,459 - -0.4
1,283,459 - -0.6
1,283,513 + -1.2
1,283,582 + -0.3
1,283,583 - -0.7
1,283,583 - -0.4
1,283,830 + A4249_RS06290 0.36 -0.4
1,283,830 + A4249_RS06290 0.36 +0.4
1,283,830 + A4249_RS06290 0.36 +0.1
1,283,831 - A4249_RS06290 0.36 -0.2
1,283,831 - A4249_RS06290 0.36 -0.4
1,283,831 - A4249_RS06290 0.36 +0.6
1,283,831 - A4249_RS06290 0.36 +0.6
1,283,831 - A4249_RS06290 0.36 -1.0
1,283,831 - A4249_RS06290 0.36 -0.3
1,283,831 - A4249_RS06290 0.36 -0.2
1,283,831 - A4249_RS06290 0.36 -0.8
1,283,831 - A4249_RS06290 0.36 -0.4
1,283,831 - A4249_RS06290 0.36 -0.9
1,283,862 + A4249_RS06290 0.41 -0.7
1,283,862 + A4249_RS06290 0.41 -2.0
1,283,863 - A4249_RS06290 0.41 -0.7
1,283,863 - A4249_RS06290 0.41 -0.2
1,283,905 + A4249_RS06290 0.48 -1.5
1,283,905 + A4249_RS06290 0.48 -0.5
1,283,906 - A4249_RS06290 0.48 -0.6
1,283,986 + A4249_RS06290 0.61 +0.4
1,283,986 + A4249_RS06290 0.61 +0.6
1,283,987 - A4249_RS06290 0.61 -0.7
1,284,133 + A4249_RS06290 0.84 +0.4
1,284,134 - A4249_RS06290 0.84 +0.6
1,284,134 - A4249_RS06290 0.84 -0.1
1,284,134 - A4249_RS06290 0.84 -0.7
1,284,157 + A4249_RS06290 0.88 -0.6
1,284,157 + A4249_RS06290 0.88 -0.2
1,284,157 + A4249_RS06290 0.88 -0.6
1,284,158 - A4249_RS06290 0.88 -0.2
1,284,158 - A4249_RS06290 0.88 -1.5
1,284,158 - A4249_RS06290 0.88 +0.9
1,284,158 - A4249_RS06290 0.88 +0.6
1,284,158 - A4249_RS06290 0.88 -0.2
1,284,158 - A4249_RS06290 0.88 -0.3
1,284,158 - A4249_RS06290 0.88 +0.4
1,284,158 - A4249_RS06290 0.88 -0.3
1,284,236 + +0.2
1,284,237 - +0.0
1,284,937 - -0.1
1,284,937 - +1.4
1,284,937 - +0.2
1,284,937 - +0.2

Or see this region's nucleotide sequence