Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16755 and A4249_RS05215 are separated by 286 nucleotides A4249_RS05215 and A4249_RS05220 are separated by 46 nucleotides A4249_RS05220 and A4249_RS05225 are separated by 150 nucleotides
A4249_RS16755: A4249_RS16755 - DUF2252 family protein, at 1,073,298 to 1,073,765
_RS16755
A4249_RS05215: A4249_RS05215 - hypothetical protein, at 1,074,052 to 1,074,690
_RS05215
A4249_RS05220: A4249_RS05220 - hypothetical protein, at 1,074,737 to 1,075,084
_RS05220
A4249_RS05225: A4249_RS05225 - error-prone DNA polymerase, at 1,075,235 to 1,078,489
_RS05225
Position (kb)
1074
1075
1076 Strain fitness (log2 ratio)
-2
-1
0
1 at 1073.742 kb on + strand at 1073.773 kb on + strand at 1073.774 kb on - strand at 1073.774 kb on - strand at 1073.799 kb on + strand at 1073.799 kb on + strand at 1073.799 kb on + strand at 1073.799 kb on + strand at 1073.800 kb on - strand at 1073.800 kb on - strand at 1073.800 kb on - strand at 1073.800 kb on - strand at 1073.875 kb on - strand at 1073.875 kb on - strand at 1074.053 kb on + strand at 1074.053 kb on + strand at 1074.054 kb on - strand at 1074.096 kb on - strand at 1074.096 kb on - strand at 1074.140 kb on + strand, within A4249_RS05215 at 1074.141 kb on - strand, within A4249_RS05215 at 1074.240 kb on + strand, within A4249_RS05215 at 1074.266 kb on + strand, within A4249_RS05215 at 1074.267 kb on - strand, within A4249_RS05215 at 1074.267 kb on - strand, within A4249_RS05215 at 1074.522 kb on + strand, within A4249_RS05215 at 1074.523 kb on - strand, within A4249_RS05215 at 1074.532 kb on + strand, within A4249_RS05215 at 1074.533 kb on - strand, within A4249_RS05215 at 1074.574 kb on - strand, within A4249_RS05215 at 1074.739 kb on - strand at 1074.762 kb on + strand at 1074.763 kb on - strand at 1074.763 kb on - strand at 1074.818 kb on + strand, within A4249_RS05220 at 1074.818 kb on + strand, within A4249_RS05220 at 1074.818 kb on + strand, within A4249_RS05220 at 1074.818 kb on + strand, within A4249_RS05220 at 1074.818 kb on + strand, within A4249_RS05220 at 1074.818 kb on + strand, within A4249_RS05220 at 1074.819 kb on - strand, within A4249_RS05220 at 1074.819 kb on - strand, within A4249_RS05220 at 1074.819 kb on - strand, within A4249_RS05220 at 1074.819 kb on - strand, within A4249_RS05220 at 1074.819 kb on - strand, within A4249_RS05220 at 1074.819 kb on - strand, within A4249_RS05220 at 1074.858 kb on + strand, within A4249_RS05220 at 1074.858 kb on + strand, within A4249_RS05220 at 1074.858 kb on + strand, within A4249_RS05220 at 1074.858 kb on + strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1074.859 kb on - strand, within A4249_RS05220 at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.290 kb on + strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.291 kb on - strand at 1075.490 kb on + strand at 1075.490 kb on + strand at 1075.490 kb on + strand at 1075.490 kb on + strand at 1075.490 kb on + strand at 1075.490 kb on + strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.491 kb on - strand at 1075.536 kb on + strand at 1075.536 kb on + strand at 1075.537 kb on - strand at 1075.770 kb on + strand, within A4249_RS05225 at 1075.770 kb on + strand, within A4249_RS05225 at 1075.771 kb on - strand, within A4249_RS05225 at 1075.771 kb on - strand, within A4249_RS05225 at 1075.771 kb on - strand, within A4249_RS05225 at 1075.771 kb on - strand, within A4249_RS05225
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 1,073,742 + -2.0 1,073,773 + -0.5 1,073,774 - -0.0 1,073,774 - -1.3 1,073,799 + -0.2 1,073,799 + +0.2 1,073,799 + +0.4 1,073,799 + +0.4 1,073,800 - +0.3 1,073,800 - -0.3 1,073,800 - +0.3 1,073,800 - -0.6 1,073,875 - +0.7 1,073,875 - -0.0 1,074,053 + -1.0 1,074,053 + +0.1 1,074,054 - -0.0 1,074,096 - +0.5 1,074,096 - -0.0 1,074,140 + A4249_RS05215 0.14 -0.4 1,074,141 - A4249_RS05215 0.14 -0.6 1,074,240 + A4249_RS05215 0.29 +0.6 1,074,266 + A4249_RS05215 0.33 -0.5 1,074,267 - A4249_RS05215 0.34 +0.2 1,074,267 - A4249_RS05215 0.34 -0.4 1,074,522 + A4249_RS05215 0.74 -1.1 1,074,523 - A4249_RS05215 0.74 +0.5 1,074,532 + A4249_RS05215 0.75 +0.2 1,074,533 - A4249_RS05215 0.75 -1.1 1,074,574 - A4249_RS05215 0.82 +0.2 1,074,739 - +0.2 1,074,762 + -0.2 1,074,763 - +0.1 1,074,763 - +0.1 1,074,818 + A4249_RS05220 0.23 -0.1 1,074,818 + A4249_RS05220 0.23 -0.2 1,074,818 + A4249_RS05220 0.23 +1.3 1,074,818 + A4249_RS05220 0.23 -0.5 1,074,818 + A4249_RS05220 0.23 +1.2 1,074,818 + A4249_RS05220 0.23 -0.7 1,074,819 - A4249_RS05220 0.24 +1.0 1,074,819 - A4249_RS05220 0.24 +0.8 1,074,819 - A4249_RS05220 0.24 +0.1 1,074,819 - A4249_RS05220 0.24 -0.5 1,074,819 - A4249_RS05220 0.24 +0.8 1,074,819 - A4249_RS05220 0.24 -0.2 1,074,858 + A4249_RS05220 0.35 -0.2 1,074,858 + A4249_RS05220 0.35 -1.0 1,074,858 + A4249_RS05220 0.35 -0.1 1,074,858 + A4249_RS05220 0.35 -0.7 1,074,859 - A4249_RS05220 0.35 -0.4 1,074,859 - A4249_RS05220 0.35 -0.7 1,074,859 - A4249_RS05220 0.35 -1.2 1,074,859 - A4249_RS05220 0.35 -0.7 1,074,859 - A4249_RS05220 0.35 -0.6 1,074,859 - A4249_RS05220 0.35 -0.6 1,074,859 - A4249_RS05220 0.35 +0.1 1,074,859 - A4249_RS05220 0.35 +0.1 1,074,859 - A4249_RS05220 0.35 +1.2 1,075,290 + -1.0 1,075,290 + +0.2 1,075,290 + +0.5 1,075,290 + +0.0 1,075,290 + -0.1 1,075,290 + -1.2 1,075,290 + -0.3 1,075,290 + -0.2 1,075,290 + -0.0 1,075,290 + -0.2 1,075,290 + -0.3 1,075,290 + -0.0 1,075,290 + -0.5 1,075,290 + +0.3 1,075,291 - -0.2 1,075,291 - +0.1 1,075,291 - +0.2 1,075,291 - -0.1 1,075,291 - -1.0 1,075,291 - +0.1 1,075,291 - -0.6 1,075,291 - -1.0 1,075,291 - -0.3 1,075,291 - -1.6 1,075,291 - +1.0 1,075,291 - -2.1 1,075,291 - +0.4 1,075,291 - +0.1 1,075,291 - -0.5 1,075,291 - -0.1 1,075,291 - +0.4 1,075,291 - -0.0 1,075,291 - +0.1 1,075,291 - -2.6 1,075,291 - -0.2 1,075,490 + -0.3 1,075,490 + +0.0 1,075,490 + +0.4 1,075,490 + +0.7 1,075,490 + -0.3 1,075,490 + -0.3 1,075,491 - -0.6 1,075,491 - -0.6 1,075,491 - -0.1 1,075,491 - -0.0 1,075,491 - -0.4 1,075,491 - +0.9 1,075,491 - -0.1 1,075,491 - +0.9 1,075,491 - +0.4 1,075,491 - -0.6 1,075,536 + -0.3 1,075,536 + +0.0 1,075,537 - +0.6 1,075,770 + A4249_RS05225 0.16 -1.0 1,075,770 + A4249_RS05225 0.16 +0.3 1,075,771 - A4249_RS05225 0.16 +0.6 1,075,771 - A4249_RS05225 0.16 -0.3 1,075,771 - A4249_RS05225 0.16 +0.6 1,075,771 - A4249_RS05225 0.16 +0.9
Or see this region's nucleotide sequence