Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04715 and A4249_RS04720 are separated by 131 nucleotides A4249_RS04720 and A4249_RS04725 are separated by 4 nucleotides
A4249_RS04715: A4249_RS04715 - rod shape-determining protein RodA, at 979,893 to 981,047
_RS04715
A4249_RS04720: A4249_RS04720 - acyl-CoA dehydrogenase family protein, at 981,179 to 982,360
_RS04720
A4249_RS04725: A4249_RS04725 - acyl-CoA dehydrogenase, at 982,365 to 983,483
_RS04725
Position (kb) 981
982
983 Strain fitness (log2 ratio) -2
-1
0
1
2 at 981.051 kb on + strand at 981.051 kb on + strand at 981.051 kb on + strand at 981.060 kb on + strand at 981.061 kb on - strand at 981.061 kb on - strand at 981.061 kb on - strand at 981.061 kb on - strand at 981.110 kb on - strand at 981.377 kb on + strand, within A4249_RS04720 at 981.377 kb on + strand, within A4249_RS04720 at 981.378 kb on - strand, within A4249_RS04720 at 981.572 kb on + strand, within A4249_RS04720 at 981.573 kb on - strand, within A4249_RS04720 at 981.573 kb on - strand, within A4249_RS04720 at 981.674 kb on + strand, within A4249_RS04720 at 981.674 kb on + strand, within A4249_RS04720 at 981.675 kb on - strand, within A4249_RS04720 at 981.834 kb on - strand, within A4249_RS04720 at 981.905 kb on + strand, within A4249_RS04720 at 981.905 kb on + strand, within A4249_RS04720 at 981.905 kb on + strand, within A4249_RS04720 at 981.905 kb on + strand, within A4249_RS04720 at 981.906 kb on - strand, within A4249_RS04720 at 981.906 kb on - strand, within A4249_RS04720 at 981.906 kb on - strand, within A4249_RS04720 at 981.906 kb on - strand, within A4249_RS04720 at 981.906 kb on - strand, within A4249_RS04720 at 981.906 kb on - strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.151 kb on + strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.152 kb on - strand, within A4249_RS04720 at 982.154 kb on + strand, within A4249_RS04720 at 982.154 kb on + strand, within A4249_RS04720 at 982.154 kb on + strand, within A4249_RS04720 at 982.155 kb on - strand, within A4249_RS04720 at 982.155 kb on - strand, within A4249_RS04720 at 982.155 kb on - strand, within A4249_RS04720 at 982.155 kb on - strand, within A4249_RS04720 at 982.289 kb on - strand at 982.317 kb on + strand at 982.317 kb on + strand at 982.317 kb on + strand at 982.318 kb on - strand at 982.318 kb on - strand at 982.318 kb on - strand at 982.318 kb on - strand at 982.318 kb on - strand at 982.630 kb on - strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.897 kb on + strand, within A4249_RS04725 at 982.898 kb on - strand, within A4249_RS04725 at 982.898 kb on - strand, within A4249_RS04725 at 982.898 kb on - strand, within A4249_RS04725 at 982.898 kb on - strand, within A4249_RS04725 at 982.898 kb on - strand, within A4249_RS04725 at 982.961 kb on + strand, within A4249_RS04725 at 982.961 kb on + strand, within A4249_RS04725 at 982.961 kb on + strand, within A4249_RS04725 at 982.962 kb on - strand, within A4249_RS04725 at 982.962 kb on - strand, within A4249_RS04725 at 983.130 kb on + strand, within A4249_RS04725 at 983.130 kb on + strand, within A4249_RS04725 at 983.131 kb on - strand, within A4249_RS04725 at 983.131 kb on - strand, within A4249_RS04725
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 981,051 + +0.1 981,051 + -0.4 981,051 + +0.7 981,060 + +0.4 981,061 - +1.0 981,061 - +1.9 981,061 - +0.0 981,061 - -2.2 981,110 - +0.2 981,377 + A4249_RS04720 0.17 +0.4 981,377 + A4249_RS04720 0.17 +0.1 981,378 - A4249_RS04720 0.17 -0.4 981,572 + A4249_RS04720 0.33 -0.5 981,573 - A4249_RS04720 0.33 -1.2 981,573 - A4249_RS04720 0.33 +0.4 981,674 + A4249_RS04720 0.42 -0.1 981,674 + A4249_RS04720 0.42 +0.3 981,675 - A4249_RS04720 0.42 -0.6 981,834 - A4249_RS04720 0.55 +0.1 981,905 + A4249_RS04720 0.61 +0.2 981,905 + A4249_RS04720 0.61 -0.3 981,905 + A4249_RS04720 0.61 +0.4 981,905 + A4249_RS04720 0.61 +0.1 981,906 - A4249_RS04720 0.62 +0.7 981,906 - A4249_RS04720 0.62 +1.3 981,906 - A4249_RS04720 0.62 -0.8 981,906 - A4249_RS04720 0.62 +0.8 981,906 - A4249_RS04720 0.62 -0.0 981,906 - A4249_RS04720 0.62 +0.0 982,151 + A4249_RS04720 0.82 -0.1 982,151 + A4249_RS04720 0.82 +0.1 982,151 + A4249_RS04720 0.82 -2.0 982,151 + A4249_RS04720 0.82 -0.4 982,151 + A4249_RS04720 0.82 -0.1 982,151 + A4249_RS04720 0.82 -0.4 982,151 + A4249_RS04720 0.82 -0.3 982,152 - A4249_RS04720 0.82 -0.2 982,152 - A4249_RS04720 0.82 +0.8 982,152 - A4249_RS04720 0.82 +0.3 982,152 - A4249_RS04720 0.82 -0.7 982,152 - A4249_RS04720 0.82 -0.2 982,152 - A4249_RS04720 0.82 -0.7 982,152 - A4249_RS04720 0.82 +0.8 982,152 - A4249_RS04720 0.82 +0.3 982,152 - A4249_RS04720 0.82 +0.4 982,154 + A4249_RS04720 0.82 +0.7 982,154 + A4249_RS04720 0.82 -0.6 982,154 + A4249_RS04720 0.82 +0.2 982,155 - A4249_RS04720 0.83 -0.4 982,155 - A4249_RS04720 0.83 -0.7 982,155 - A4249_RS04720 0.83 -0.7 982,155 - A4249_RS04720 0.83 +0.3 982,289 - -0.2 982,317 + -0.3 982,317 + -2.1 982,317 + -0.8 982,318 - -0.5 982,318 - +0.0 982,318 - -0.3 982,318 - -0.4 982,318 - -0.9 982,630 - A4249_RS04725 0.24 -2.2 982,897 + A4249_RS04725 0.48 -0.2 982,897 + A4249_RS04725 0.48 -0.3 982,897 + A4249_RS04725 0.48 -0.5 982,897 + A4249_RS04725 0.48 +0.4 982,897 + A4249_RS04725 0.48 +0.3 982,897 + A4249_RS04725 0.48 +0.3 982,897 + A4249_RS04725 0.48 +0.2 982,897 + A4249_RS04725 0.48 -0.0 982,897 + A4249_RS04725 0.48 -0.9 982,898 - A4249_RS04725 0.48 +0.0 982,898 - A4249_RS04725 0.48 -0.1 982,898 - A4249_RS04725 0.48 -0.1 982,898 - A4249_RS04725 0.48 +0.5 982,898 - A4249_RS04725 0.48 -1.4 982,961 + A4249_RS04725 0.53 -0.2 982,961 + A4249_RS04725 0.53 +0.1 982,961 + A4249_RS04725 0.53 +0.0 982,962 - A4249_RS04725 0.53 -0.3 982,962 - A4249_RS04725 0.53 -0.3 983,130 + A4249_RS04725 0.68 -0.4 983,130 + A4249_RS04725 0.68 -0.2 983,131 - A4249_RS04725 0.68 +0.6 983,131 - A4249_RS04725 0.68 -0.3
Or see this region's nucleotide sequence