Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS04000 and A4249_RS04005 are separated by 142 nucleotides A4249_RS04005 and A4249_RS04010 are separated by 128 nucleotides A4249_RS04010 and A4249_RS04015 are separated by 37 nucleotides A4249_RS04015 and A4249_RS04020 are separated by 27 nucleotides
A4249_RS04000: A4249_RS04000 - 50S ribosomal protein L30, at 831,489 to 831,677
_RS04000
A4249_RS04005: A4249_RS04005 - 50S ribosomal protein L15, at 831,820 to 832,413
_RS04005
A4249_RS04010: A4249_RS04010 - preprotein translocase subunit SecY, at 832,542 to 833,921
_RS04010
A4249_RS04015: A4249_RS04015 - adenylate kinase, at 833,959 to 834,519
_RS04015
A4249_RS04020: A4249_RS04020 - energy transducer TonB, at 834,547 to 835,284
_RS04020
Position (kb) 832
833
834 Strain fitness (log2 ratio) -1
0
1 at 833.919 kb on + strand at 833.919 kb on + strand at 833.926 kb on + strand at 833.926 kb on + strand at 833.926 kb on + strand at 833.926 kb on + strand at 834.567 kb on + strand at 834.568 kb on - strand at 834.568 kb on - strand at 834.568 kb on - strand at 834.568 kb on - strand at 834.611 kb on + strand at 834.611 kb on + strand at 834.611 kb on + strand at 834.612 kb on - strand at 834.612 kb on - strand at 834.721 kb on + strand, within A4249_RS04020 at 834.722 kb on - strand, within A4249_RS04020
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 833,919 + +1.3 833,919 + -0.7 833,926 + +0.6 833,926 + +0.0 833,926 + +0.0 833,926 + +0.4 834,567 + -0.5 834,568 - -1.2 834,568 - -0.2 834,568 - -0.1 834,568 - -0.1 834,611 + +0.0 834,611 + -0.9 834,611 + -0.9 834,612 - +0.1 834,612 - +0.3 834,721 + A4249_RS04020 0.24 -1.4 834,722 - A4249_RS04020 0.24 -1.3
Or see this region's nucleotide sequence