Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03330 and A4249_RS03335 are separated by 50 nucleotides A4249_RS03335 and A4249_RS03340 are separated by 13 nucleotides A4249_RS03340 and A4249_RS03345 are separated by 30 nucleotides
A4249_RS03330: A4249_RS03330 - nuclear transport factor 2 family protein, at 698,959 to 699,426
_RS03330
A4249_RS03335: A4249_RS03335 - DUF411 domain-containing protein, at 699,477 to 699,950
_RS03335
A4249_RS03340: A4249_RS03340 - PepSY domain-containing protein, at 699,964 to 700,692
_RS03340
A4249_RS03345: A4249_RS03345 - type II restriction endonuclease, at 700,723 to 701,994
_RS03345
Position (kb) 699
700
701 Strain fitness (log2 ratio) -2
-1
0
1 at 699.064 kb on + strand, within A4249_RS03330 at 699.064 kb on + strand, within A4249_RS03330 at 699.064 kb on + strand, within A4249_RS03330 at 699.064 kb on + strand, within A4249_RS03330 at 699.065 kb on - strand, within A4249_RS03330 at 699.166 kb on + strand, within A4249_RS03330 at 699.166 kb on + strand, within A4249_RS03330 at 699.167 kb on - strand, within A4249_RS03330 at 699.167 kb on - strand, within A4249_RS03330 at 699.167 kb on - strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.169 kb on + strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.170 kb on - strand, within A4249_RS03330 at 699.258 kb on + strand, within A4249_RS03330 at 699.259 kb on - strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.280 kb on + strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.281 kb on - strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.286 kb on + strand, within A4249_RS03330 at 699.287 kb on - strand, within A4249_RS03330 at 699.287 kb on - strand, within A4249_RS03330 at 699.323 kb on + strand, within A4249_RS03330 at 699.323 kb on + strand, within A4249_RS03330 at 699.323 kb on + strand, within A4249_RS03330 at 699.324 kb on - strand, within A4249_RS03330 at 699.324 kb on - strand, within A4249_RS03330 at 699.324 kb on - strand, within A4249_RS03330 at 699.386 kb on + strand at 699.387 kb on - strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.388 kb on + strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.389 kb on - strand at 699.591 kb on + strand, within A4249_RS03335 at 699.591 kb on + strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.592 kb on - strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.753 kb on + strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.754 kb on - strand, within A4249_RS03335 at 699.891 kb on + strand, within A4249_RS03335 at 699.891 kb on + strand, within A4249_RS03335 at 699.891 kb on + strand, within A4249_RS03335 at 699.891 kb on + strand, within A4249_RS03335 at 699.892 kb on - strand, within A4249_RS03335 at 699.892 kb on - strand, within A4249_RS03335 at 699.892 kb on - strand, within A4249_RS03335 at 699.948 kb on + strand at 700.330 kb on + strand, within A4249_RS03340 at 700.330 kb on + strand, within A4249_RS03340 at 700.330 kb on + strand, within A4249_RS03340 at 700.330 kb on + strand, within A4249_RS03340 at 700.330 kb on + strand, within A4249_RS03340 at 700.330 kb on + strand, within A4249_RS03340 at 700.331 kb on - strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.447 kb on + strand, within A4249_RS03340 at 700.448 kb on - strand, within A4249_RS03340 at 700.448 kb on - strand, within A4249_RS03340 at 700.448 kb on - strand, within A4249_RS03340 at 700.448 kb on - strand, within A4249_RS03340 at 700.448 kb on - strand, within A4249_RS03340 at 700.448 kb on - strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.504 kb on + strand, within A4249_RS03340 at 700.505 kb on - strand, within A4249_RS03340 at 700.505 kb on - strand, within A4249_RS03340 at 700.505 kb on - strand, within A4249_RS03340 at 700.505 kb on - strand, within A4249_RS03340 at 700.505 kb on - strand, within A4249_RS03340 at 700.625 kb on + strand at 700.625 kb on + strand at 700.626 kb on - strand at 700.626 kb on - strand at 700.627 kb on - strand at 700.820 kb on + strand at 700.820 kb on + strand at 700.820 kb on + strand at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.976 kb on + strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 700.977 kb on - strand, within A4249_RS03345 at 701.465 kb on + strand, within A4249_RS03345 at 701.465 kb on + strand, within A4249_RS03345 at 701.465 kb on + strand, within A4249_RS03345 at 701.465 kb on + strand, within A4249_RS03345 at 701.465 kb on + strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.466 kb on - strand, within A4249_RS03345 at 701.513 kb on + strand, within A4249_RS03345 at 701.514 kb on - strand, within A4249_RS03345 at 701.567 kb on + strand, within A4249_RS03345 at 701.567 kb on + strand, within A4249_RS03345 at 701.567 kb on + strand, within A4249_RS03345 at 701.567 kb on + strand, within A4249_RS03345 at 701.567 kb on + strand, within A4249_RS03345 at 701.567 kb on + strand, within A4249_RS03345 at 701.568 kb on - strand, within A4249_RS03345 at 701.568 kb on - strand, within A4249_RS03345
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 699,064 + A4249_RS03330 0.22 -0.1 699,064 + A4249_RS03330 0.22 -1.6 699,064 + A4249_RS03330 0.22 -0.2 699,064 + A4249_RS03330 0.22 -0.0 699,065 - A4249_RS03330 0.23 +0.4 699,166 + A4249_RS03330 0.44 +0.3 699,166 + A4249_RS03330 0.44 +0.8 699,167 - A4249_RS03330 0.44 -0.3 699,167 - A4249_RS03330 0.44 -0.3 699,167 - A4249_RS03330 0.44 -1.6 699,169 + A4249_RS03330 0.45 -0.3 699,169 + A4249_RS03330 0.45 +0.0 699,169 + A4249_RS03330 0.45 -0.2 699,169 + A4249_RS03330 0.45 -0.3 699,169 + A4249_RS03330 0.45 +0.3 699,169 + A4249_RS03330 0.45 -0.8 699,169 + A4249_RS03330 0.45 +0.8 699,170 - A4249_RS03330 0.45 +0.1 699,170 - A4249_RS03330 0.45 -0.7 699,170 - A4249_RS03330 0.45 +0.2 699,170 - A4249_RS03330 0.45 -0.1 699,170 - A4249_RS03330 0.45 +0.7 699,170 - A4249_RS03330 0.45 -0.8 699,170 - A4249_RS03330 0.45 +0.1 699,258 + A4249_RS03330 0.64 -0.3 699,259 - A4249_RS03330 0.64 +0.2 699,280 + A4249_RS03330 0.69 +0.2 699,280 + A4249_RS03330 0.69 +0.4 699,280 + A4249_RS03330 0.69 -1.8 699,280 + A4249_RS03330 0.69 -1.8 699,280 + A4249_RS03330 0.69 -0.4 699,280 + A4249_RS03330 0.69 +0.2 699,280 + A4249_RS03330 0.69 +0.3 699,281 - A4249_RS03330 0.69 -1.7 699,281 - A4249_RS03330 0.69 -1.0 699,281 - A4249_RS03330 0.69 -0.1 699,281 - A4249_RS03330 0.69 +0.7 699,281 - A4249_RS03330 0.69 +1.0 699,281 - A4249_RS03330 0.69 -1.1 699,281 - A4249_RS03330 0.69 +0.8 699,281 - A4249_RS03330 0.69 +0.4 699,281 - A4249_RS03330 0.69 +0.2 699,281 - A4249_RS03330 0.69 +0.6 699,281 - A4249_RS03330 0.69 -0.5 699,281 - A4249_RS03330 0.69 -0.6 699,286 + A4249_RS03330 0.70 +0.6 699,286 + A4249_RS03330 0.70 +0.0 699,286 + A4249_RS03330 0.70 +0.3 699,286 + A4249_RS03330 0.70 -0.3 699,286 + A4249_RS03330 0.70 +0.1 699,286 + A4249_RS03330 0.70 -1.8 699,286 + A4249_RS03330 0.70 +0.0 699,287 - A4249_RS03330 0.70 +0.4 699,287 - A4249_RS03330 0.70 -0.6 699,323 + A4249_RS03330 0.78 -0.2 699,323 + A4249_RS03330 0.78 +0.8 699,323 + A4249_RS03330 0.78 -0.5 699,324 - A4249_RS03330 0.78 +0.1 699,324 - A4249_RS03330 0.78 +0.7 699,324 - A4249_RS03330 0.78 -1.7 699,386 + +0.4 699,387 - +0.3 699,388 + -0.1 699,388 + -0.8 699,388 + +0.3 699,388 + -0.4 699,388 + +0.9 699,388 + -0.3 699,388 + -0.3 699,388 + +0.2 699,388 + +0.5 699,388 + -0.0 699,388 + -0.2 699,388 + +0.2 699,388 + +0.1 699,388 + -0.2 699,388 + -0.4 699,388 + +0.5 699,388 + -0.6 699,389 - -0.6 699,389 - -0.4 699,389 - +0.2 699,389 - -1.6 699,389 - +0.3 699,389 - +0.4 699,389 - +0.6 699,389 - -0.3 699,389 - +0.2 699,389 - -2.1 699,389 - +0.1 699,389 - +0.3 699,389 - +0.6 699,591 + A4249_RS03335 0.24 -0.6 699,591 + A4249_RS03335 0.24 +0.8 699,592 - A4249_RS03335 0.24 +0.1 699,592 - A4249_RS03335 0.24 +0.3 699,592 - A4249_RS03335 0.24 +0.5 699,592 - A4249_RS03335 0.24 -0.8 699,592 - A4249_RS03335 0.24 +0.3 699,753 + A4249_RS03335 0.58 -0.8 699,753 + A4249_RS03335 0.58 +0.7 699,753 + A4249_RS03335 0.58 -0.6 699,753 + A4249_RS03335 0.58 -0.6 699,753 + A4249_RS03335 0.58 -0.1 699,753 + A4249_RS03335 0.58 -1.2 699,754 - A4249_RS03335 0.58 -0.0 699,754 - A4249_RS03335 0.58 +0.3 699,754 - A4249_RS03335 0.58 +0.2 699,754 - A4249_RS03335 0.58 -0.3 699,754 - A4249_RS03335 0.58 -0.8 699,891 + A4249_RS03335 0.87 +0.2 699,891 + A4249_RS03335 0.87 +0.9 699,891 + A4249_RS03335 0.87 -0.3 699,891 + A4249_RS03335 0.87 -0.7 699,892 - A4249_RS03335 0.88 +0.1 699,892 - A4249_RS03335 0.88 -1.1 699,892 - A4249_RS03335 0.88 -0.3 699,948 + -0.3 700,330 + A4249_RS03340 0.50 +0.7 700,330 + A4249_RS03340 0.50 -0.6 700,330 + A4249_RS03340 0.50 +0.1 700,330 + A4249_RS03340 0.50 -0.8 700,330 + A4249_RS03340 0.50 -0.2 700,330 + A4249_RS03340 0.50 +0.3 700,331 - A4249_RS03340 0.50 -0.0 700,447 + A4249_RS03340 0.66 -1.2 700,447 + A4249_RS03340 0.66 -1.2 700,447 + A4249_RS03340 0.66 -0.7 700,447 + A4249_RS03340 0.66 +0.0 700,447 + A4249_RS03340 0.66 +0.6 700,447 + A4249_RS03340 0.66 +0.6 700,447 + A4249_RS03340 0.66 -0.1 700,448 - A4249_RS03340 0.66 -0.3 700,448 - A4249_RS03340 0.66 -0.1 700,448 - A4249_RS03340 0.66 -0.6 700,448 - A4249_RS03340 0.66 +0.4 700,448 - A4249_RS03340 0.66 -0.1 700,448 - A4249_RS03340 0.66 -0.5 700,504 + A4249_RS03340 0.74 -0.6 700,504 + A4249_RS03340 0.74 -1.0 700,504 + A4249_RS03340 0.74 +1.0 700,504 + A4249_RS03340 0.74 -0.1 700,504 + A4249_RS03340 0.74 +0.4 700,504 + A4249_RS03340 0.74 -0.8 700,504 + A4249_RS03340 0.74 -0.6 700,504 + A4249_RS03340 0.74 -0.3 700,504 + A4249_RS03340 0.74 +0.1 700,504 + A4249_RS03340 0.74 -0.4 700,504 + A4249_RS03340 0.74 +0.7 700,504 + A4249_RS03340 0.74 -1.0 700,504 + A4249_RS03340 0.74 +0.4 700,504 + A4249_RS03340 0.74 -0.4 700,505 - A4249_RS03340 0.74 +0.3 700,505 - A4249_RS03340 0.74 -0.4 700,505 - A4249_RS03340 0.74 -0.2 700,505 - A4249_RS03340 0.74 +0.1 700,505 - A4249_RS03340 0.74 -0.1 700,625 + +0.3 700,625 + -0.6 700,626 - -0.8 700,626 - +1.4 700,627 - -0.2 700,820 + -2.0 700,820 + -0.4 700,820 + +0.5 700,976 + A4249_RS03345 0.20 +0.7 700,976 + A4249_RS03345 0.20 +0.6 700,976 + A4249_RS03345 0.20 +0.1 700,976 + A4249_RS03345 0.20 -0.5 700,976 + A4249_RS03345 0.20 -0.4 700,976 + A4249_RS03345 0.20 +0.2 700,976 + A4249_RS03345 0.20 -0.7 700,976 + A4249_RS03345 0.20 +0.1 700,976 + A4249_RS03345 0.20 +0.5 700,976 + A4249_RS03345 0.20 +0.5 700,977 - A4249_RS03345 0.20 -0.4 700,977 - A4249_RS03345 0.20 +0.3 700,977 - A4249_RS03345 0.20 -0.7 700,977 - A4249_RS03345 0.20 -0.7 700,977 - A4249_RS03345 0.20 +0.6 700,977 - A4249_RS03345 0.20 -0.4 700,977 - A4249_RS03345 0.20 +0.1 700,977 - A4249_RS03345 0.20 +0.3 700,977 - A4249_RS03345 0.20 -1.9 701,465 + A4249_RS03345 0.58 +0.2 701,465 + A4249_RS03345 0.58 -0.1 701,465 + A4249_RS03345 0.58 -0.5 701,465 + A4249_RS03345 0.58 +0.1 701,465 + A4249_RS03345 0.58 -0.2 701,466 - A4249_RS03345 0.58 -1.1 701,466 - A4249_RS03345 0.58 +0.3 701,466 - A4249_RS03345 0.58 +1.6 701,466 - A4249_RS03345 0.58 -1.0 701,466 - A4249_RS03345 0.58 +0.1 701,466 - A4249_RS03345 0.58 -1.0 701,466 - A4249_RS03345 0.58 -1.1 701,466 - A4249_RS03345 0.58 -0.5 701,513 + A4249_RS03345 0.62 -0.3 701,514 - A4249_RS03345 0.62 +0.4 701,567 + A4249_RS03345 0.66 +0.2 701,567 + A4249_RS03345 0.66 +0.3 701,567 + A4249_RS03345 0.66 -0.1 701,567 + A4249_RS03345 0.66 +0.6 701,567 + A4249_RS03345 0.66 +0.3 701,567 + A4249_RS03345 0.66 -0.3 701,568 - A4249_RS03345 0.66 -0.1 701,568 - A4249_RS03345 0.66 +0.2
Or see this region's nucleotide sequence