Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02435

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02430 and A4249_RS02435 are separated by 72 nucleotidesA4249_RS02435 and A4249_RS02440 are separated by 136 nucleotides A4249_RS02430: A4249_RS02430 - DUF808 domain-containing protein, at 520,350 to 521,294 _RS02430 A4249_RS02435: A4249_RS02435 - alkaline phosphatase family protein, at 521,367 to 523,070 _RS02435 A4249_RS02440: A4249_RS02440 - pyruvate kinase, at 523,207 to 524,652 _RS02440 Position (kb) 521 522 523 524Strain fitness (log2 ratio) -2 -1 0 1at 520.500 kb on + strand, within A4249_RS02430at 520.500 kb on + strand, within A4249_RS02430at 520.500 kb on + strand, within A4249_RS02430at 520.500 kb on + strand, within A4249_RS02430at 520.500 kb on + strand, within A4249_RS02430at 520.500 kb on + strand, within A4249_RS02430at 520.500 kb on + strand, within A4249_RS02430at 520.501 kb on - strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.659 kb on + strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.660 kb on - strand, within A4249_RS02430at 520.905 kb on + strand, within A4249_RS02430at 521.076 kb on - strand, within A4249_RS02430at 521.076 kb on - strand, within A4249_RS02430at 521.076 kb on - strand, within A4249_RS02430at 521.096 kb on + strand, within A4249_RS02430at 521.097 kb on - strand, within A4249_RS02430at 521.097 kb on - strand, within A4249_RS02430at 521.293 kb on - strandat 521.293 kb on - strandat 521.335 kb on + strandat 521.335 kb on + strandat 521.335 kb on + strandat 521.335 kb on + strandat 521.336 kb on - strandat 521.336 kb on - strandat 521.336 kb on - strandat 521.336 kb on - strandat 521.499 kb on - strandat 521.562 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.751 kb on + strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.752 kb on - strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.979 kb on + strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 521.980 kb on - strand, within A4249_RS02435at 522.081 kb on + strand, within A4249_RS02435at 522.219 kb on + strand, within A4249_RS02435at 522.219 kb on + strand, within A4249_RS02435at 522.219 kb on + strand, within A4249_RS02435at 522.220 kb on - strand, within A4249_RS02435at 522.220 kb on - strand, within A4249_RS02435at 522.220 kb on - strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.305 kb on + strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.306 kb on - strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.309 kb on + strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.310 kb on - strand, within A4249_RS02435at 522.879 kb on + strand, within A4249_RS02435at 522.879 kb on + strand, within A4249_RS02435at 522.879 kb on + strand, within A4249_RS02435at 522.879 kb on + strand, within A4249_RS02435at 522.879 kb on + strand, within A4249_RS02435at 522.880 kb on - strand, within A4249_RS02435at 522.880 kb on - strand, within A4249_RS02435at 522.880 kb on - strand, within A4249_RS02435at 522.901 kb on + strandat 522.901 kb on + strandat 522.901 kb on + strandat 522.901 kb on + strandat 522.901 kb on + strandat 522.901 kb on + strandat 522.901 kb on + strandat 522.902 kb on - strandat 522.902 kb on - strandat 522.902 kb on - strandat 523.068 kb on + strandat 523.068 kb on + strandat 523.068 kb on + strandat 523.068 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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520,500 + A4249_RS02430 0.16 -0.1
520,500 + A4249_RS02430 0.16 +0.0
520,500 + A4249_RS02430 0.16 -0.3
520,500 + A4249_RS02430 0.16 +0.0
520,500 + A4249_RS02430 0.16 -0.1
520,500 + A4249_RS02430 0.16 -0.2
520,500 + A4249_RS02430 0.16 -0.4
520,501 - A4249_RS02430 0.16 -0.6
520,659 + A4249_RS02430 0.33 -0.2
520,659 + A4249_RS02430 0.33 +0.5
520,659 + A4249_RS02430 0.33 +0.3
520,659 + A4249_RS02430 0.33 +0.2
520,659 + A4249_RS02430 0.33 -0.5
520,659 + A4249_RS02430 0.33 -0.8
520,659 + A4249_RS02430 0.33 -0.9
520,659 + A4249_RS02430 0.33 +0.3
520,659 + A4249_RS02430 0.33 -0.9
520,659 + A4249_RS02430 0.33 -1.4
520,659 + A4249_RS02430 0.33 -0.5
520,659 + A4249_RS02430 0.33 +0.7
520,659 + A4249_RS02430 0.33 -0.8
520,660 - A4249_RS02430 0.33 -0.2
520,660 - A4249_RS02430 0.33 +0.6
520,660 - A4249_RS02430 0.33 -0.1
520,660 - A4249_RS02430 0.33 +0.0
520,660 - A4249_RS02430 0.33 -0.0
520,660 - A4249_RS02430 0.33 -0.4
520,660 - A4249_RS02430 0.33 +0.7
520,660 - A4249_RS02430 0.33 +0.9
520,660 - A4249_RS02430 0.33 -0.3
520,660 - A4249_RS02430 0.33 +1.2
520,660 - A4249_RS02430 0.33 -1.2
520,660 - A4249_RS02430 0.33 -0.3
520,660 - A4249_RS02430 0.33 -0.6
520,660 - A4249_RS02430 0.33 -0.7
520,905 + A4249_RS02430 0.59 +0.3
521,076 - A4249_RS02430 0.77 -0.4
521,076 - A4249_RS02430 0.77 +0.1
521,076 - A4249_RS02430 0.77 -0.7
521,096 + A4249_RS02430 0.79 +1.2
521,097 - A4249_RS02430 0.79 +0.2
521,097 - A4249_RS02430 0.79 -2.6
521,293 - +0.2
521,293 - -0.5
521,335 + +0.6
521,335 + -0.4
521,335 + -1.4
521,335 + +0.2
521,336 - -0.1
521,336 - -0.2
521,336 - +0.6
521,336 - -0.1
521,499 - +0.3
521,562 + A4249_RS02435 0.11 +0.3
521,751 + A4249_RS02435 0.23 +0.3
521,751 + A4249_RS02435 0.23 -0.5
521,751 + A4249_RS02435 0.23 +0.2
521,751 + A4249_RS02435 0.23 -0.1
521,751 + A4249_RS02435 0.23 +0.3
521,751 + A4249_RS02435 0.23 -0.6
521,751 + A4249_RS02435 0.23 -0.6
521,751 + A4249_RS02435 0.23 -0.0
521,752 - A4249_RS02435 0.23 -1.5
521,752 - A4249_RS02435 0.23 -0.0
521,752 - A4249_RS02435 0.23 -0.1
521,752 - A4249_RS02435 0.23 -1.0
521,752 - A4249_RS02435 0.23 +0.2
521,752 - A4249_RS02435 0.23 +0.3
521,752 - A4249_RS02435 0.23 +0.2
521,752 - A4249_RS02435 0.23 +0.3
521,752 - A4249_RS02435 0.23 +0.1
521,752 - A4249_RS02435 0.23 -0.5
521,979 + A4249_RS02435 0.36 +1.0
521,979 + A4249_RS02435 0.36 -1.0
521,979 + A4249_RS02435 0.36 +0.1
521,979 + A4249_RS02435 0.36 -0.5
521,979 + A4249_RS02435 0.36 -0.4
521,979 + A4249_RS02435 0.36 +0.2
521,979 + A4249_RS02435 0.36 -0.4
521,979 + A4249_RS02435 0.36 +0.7
521,979 + A4249_RS02435 0.36 +0.5
521,979 + A4249_RS02435 0.36 +0.0
521,979 + A4249_RS02435 0.36 -0.0
521,979 + A4249_RS02435 0.36 +0.0
521,980 - A4249_RS02435 0.36 +0.7
521,980 - A4249_RS02435 0.36 -0.9
521,980 - A4249_RS02435 0.36 -0.5
521,980 - A4249_RS02435 0.36 +0.2
521,980 - A4249_RS02435 0.36 -0.3
521,980 - A4249_RS02435 0.36 -0.0
521,980 - A4249_RS02435 0.36 +1.6
521,980 - A4249_RS02435 0.36 +1.1
521,980 - A4249_RS02435 0.36 -0.3
521,980 - A4249_RS02435 0.36 -0.5
521,980 - A4249_RS02435 0.36 +0.6
521,980 - A4249_RS02435 0.36 -0.5
522,081 + A4249_RS02435 0.42 -0.5
522,219 + A4249_RS02435 0.50 -0.2
522,219 + A4249_RS02435 0.50 -0.3
522,219 + A4249_RS02435 0.50 +0.9
522,220 - A4249_RS02435 0.50 +0.6
522,220 - A4249_RS02435 0.50 -1.5
522,220 - A4249_RS02435 0.50 +0.0
522,305 + A4249_RS02435 0.55 -0.7
522,305 + A4249_RS02435 0.55 -0.4
522,305 + A4249_RS02435 0.55 +0.0
522,305 + A4249_RS02435 0.55 -0.4
522,305 + A4249_RS02435 0.55 -0.2
522,305 + A4249_RS02435 0.55 +0.8
522,305 + A4249_RS02435 0.55 -1.3
522,305 + A4249_RS02435 0.55 -0.4
522,305 + A4249_RS02435 0.55 -0.1
522,305 + A4249_RS02435 0.55 -0.1
522,305 + A4249_RS02435 0.55 -0.8
522,305 + A4249_RS02435 0.55 -0.2
522,305 + A4249_RS02435 0.55 -0.8
522,305 + A4249_RS02435 0.55 +0.4
522,305 + A4249_RS02435 0.55 +0.1
522,306 - A4249_RS02435 0.55 +0.6
522,306 - A4249_RS02435 0.55 -2.0
522,306 - A4249_RS02435 0.55 +0.1
522,306 - A4249_RS02435 0.55 -1.0
522,306 - A4249_RS02435 0.55 +0.3
522,306 - A4249_RS02435 0.55 +0.0
522,306 - A4249_RS02435 0.55 -0.1
522,306 - A4249_RS02435 0.55 +0.4
522,306 - A4249_RS02435 0.55 -0.4
522,306 - A4249_RS02435 0.55 -0.2
522,306 - A4249_RS02435 0.55 -0.1
522,309 + A4249_RS02435 0.55 -0.0
522,309 + A4249_RS02435 0.55 -1.4
522,309 + A4249_RS02435 0.55 -0.4
522,309 + A4249_RS02435 0.55 -0.5
522,309 + A4249_RS02435 0.55 -0.6
522,309 + A4249_RS02435 0.55 -0.7
522,309 + A4249_RS02435 0.55 -0.1
522,309 + A4249_RS02435 0.55 -0.5
522,309 + A4249_RS02435 0.55 -0.5
522,309 + A4249_RS02435 0.55 +0.2
522,309 + A4249_RS02435 0.55 +0.4
522,310 - A4249_RS02435 0.55 +1.1
522,310 - A4249_RS02435 0.55 +0.1
522,310 - A4249_RS02435 0.55 -0.7
522,310 - A4249_RS02435 0.55 +0.8
522,310 - A4249_RS02435 0.55 +0.4
522,310 - A4249_RS02435 0.55 +0.3
522,310 - A4249_RS02435 0.55 +1.1
522,310 - A4249_RS02435 0.55 +0.9
522,310 - A4249_RS02435 0.55 -0.2
522,310 - A4249_RS02435 0.55 -0.4
522,310 - A4249_RS02435 0.55 +0.2
522,310 - A4249_RS02435 0.55 +0.6
522,310 - A4249_RS02435 0.55 +0.3
522,879 + A4249_RS02435 0.89 -0.2
522,879 + A4249_RS02435 0.89 -1.0
522,879 + A4249_RS02435 0.89 -0.1
522,879 + A4249_RS02435 0.89 -0.8
522,879 + A4249_RS02435 0.89 +0.9
522,880 - A4249_RS02435 0.89 +0.0
522,880 - A4249_RS02435 0.89 -0.5
522,880 - A4249_RS02435 0.89 +1.1
522,901 + -1.2
522,901 + +0.1
522,901 + -1.1
522,901 + -0.8
522,901 + -0.1
522,901 + -0.4
522,901 + +0.5
522,902 - -0.5
522,902 - -0.4
522,902 - -1.7
523,068 + -0.4
523,068 + -1.7
523,068 + -0.1
523,068 + -0.5

Or see this region's nucleotide sequence