Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02260 and A4249_RS02270 are separated by 751 nucleotides A4249_RS02270 and A4249_RS02275 are separated by 316 nucleotides
A4249_RS02260: A4249_RS02260 - cation:proton antiporter, at 474,355 to 475,608
_RS02260
A4249_RS02270: A4249_RS02270 - isoleucine--tRNA ligase, at 476,360 to 479,350
_RS02270
A4249_RS02275: A4249_RS02275 - hypothetical protein, at 479,667 to 480,569
_RS02275
Position (kb) 476
477
478
479
480 Strain fitness (log2 ratio) -1
0
1 at 475.470 kb on + strand, within A4249_RS02260 at 475.470 kb on + strand, within A4249_RS02260 at 475.471 kb on - strand, within A4249_RS02260 at 475.471 kb on - strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.472 kb on + strand, within A4249_RS02260 at 475.473 kb on - strand, within A4249_RS02260 at 475.502 kb on + strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.503 kb on - strand at 475.629 kb on + strand at 475.789 kb on + strand at 475.789 kb on + strand at 475.789 kb on + strand at 475.790 kb on - strand at 475.797 kb on - strand at 475.797 kb on - strand at 475.888 kb on + strand at 475.888 kb on + strand at 475.888 kb on + strand at 475.944 kb on - strand at 475.944 kb on - strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.103 kb on + strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.104 kb on - strand at 476.106 kb on + strand at 476.107 kb on - strand at 476.107 kb on - strand at 476.146 kb on + strand at 476.146 kb on + strand at 476.147 kb on - strand at 476.147 kb on - strand at 476.147 kb on - strand at 476.147 kb on - strand at 476.297 kb on + strand at 476.298 kb on - strand at 476.298 kb on - strand at 476.298 kb on - strand at 476.298 kb on - strand at 476.298 kb on - strand at 479.376 kb on - strand at 479.376 kb on - strand at 479.529 kb on - strand at 479.529 kb on - strand at 479.645 kb on - strand at 479.967 kb on + strand, within A4249_RS02275 at 479.967 kb on + strand, within A4249_RS02275 at 479.968 kb on - strand, within A4249_RS02275 at 479.968 kb on - strand, within A4249_RS02275 at 479.968 kb on - strand, within A4249_RS02275 at 480.027 kb on + strand, within A4249_RS02275 at 480.027 kb on + strand, within A4249_RS02275 at 480.027 kb on + strand, within A4249_RS02275 at 480.028 kb on - strand, within A4249_RS02275 at 480.028 kb on - strand, within A4249_RS02275 at 480.028 kb on - strand, within A4249_RS02275 at 480.028 kb on - strand, within A4249_RS02275 at 480.028 kb on - strand, within A4249_RS02275 at 480.028 kb on - strand, within A4249_RS02275 at 480.111 kb on + strand, within A4249_RS02275 at 480.112 kb on - strand, within A4249_RS02275 at 480.112 kb on - strand, within A4249_RS02275 at 480.112 kb on - strand, within A4249_RS02275 at 480.112 kb on - strand, within A4249_RS02275 at 480.243 kb on + strand, within A4249_RS02275 at 480.243 kb on + strand, within A4249_RS02275 at 480.288 kb on + strand, within A4249_RS02275 at 480.288 kb on + strand, within A4249_RS02275 at 480.289 kb on - strand, within A4249_RS02275 at 480.289 kb on - strand, within A4249_RS02275 at 480.289 kb on - strand, within A4249_RS02275 at 480.289 kb on - strand, within A4249_RS02275 at 480.289 kb on - strand, within A4249_RS02275 at 480.289 kb on - strand, within A4249_RS02275
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 475,470 + A4249_RS02260 0.89 -0.2 475,470 + A4249_RS02260 0.89 -0.2 475,471 - A4249_RS02260 0.89 -0.7 475,471 - A4249_RS02260 0.89 -0.0 475,472 + A4249_RS02260 0.89 -0.2 475,472 + A4249_RS02260 0.89 -0.3 475,472 + A4249_RS02260 0.89 -0.0 475,472 + A4249_RS02260 0.89 -1.3 475,473 - A4249_RS02260 0.89 +0.3 475,502 + +0.1 475,503 - -0.7 475,503 - +0.2 475,503 - -0.4 475,503 - -0.4 475,503 - -0.2 475,503 - -0.5 475,503 - -0.8 475,629 + -0.8 475,789 + -0.6 475,789 + +0.2 475,789 + -0.7 475,790 - +0.4 475,797 - -0.0 475,797 - -0.9 475,888 + -0.0 475,888 + -0.6 475,888 + -0.0 475,944 - -0.3 475,944 - +0.3 476,103 + -0.1 476,103 + +0.3 476,103 + -1.2 476,103 + +0.4 476,103 + -0.4 476,103 + -0.3 476,103 + +0.5 476,103 + -0.6 476,104 - +0.2 476,104 - -0.3 476,104 - +0.1 476,104 - +0.5 476,104 - -0.3 476,104 - -0.3 476,104 - -0.4 476,104 - +0.4 476,104 - -1.1 476,104 - -0.0 476,104 - -0.1 476,104 - +0.1 476,106 + +0.4 476,107 - -0.0 476,107 - -0.1 476,146 + +0.4 476,146 + -0.2 476,147 - -0.1 476,147 - -0.2 476,147 - +0.4 476,147 - +0.3 476,297 + -0.0 476,298 - -0.0 476,298 - +0.1 476,298 - -0.8 476,298 - +0.4 476,298 - -0.7 479,376 - -0.2 479,376 - +0.5 479,529 - -0.7 479,529 - -0.1 479,645 - +0.6 479,967 + A4249_RS02275 0.33 -0.8 479,967 + A4249_RS02275 0.33 +0.1 479,968 - A4249_RS02275 0.33 -1.0 479,968 - A4249_RS02275 0.33 +0.9 479,968 - A4249_RS02275 0.33 +0.1 480,027 + A4249_RS02275 0.40 -0.1 480,027 + A4249_RS02275 0.40 -0.5 480,027 + A4249_RS02275 0.40 -0.1 480,028 - A4249_RS02275 0.40 -0.3 480,028 - A4249_RS02275 0.40 -0.1 480,028 - A4249_RS02275 0.40 -0.2 480,028 - A4249_RS02275 0.40 -0.3 480,028 - A4249_RS02275 0.40 +0.8 480,028 - A4249_RS02275 0.40 +0.1 480,111 + A4249_RS02275 0.49 +0.5 480,112 - A4249_RS02275 0.49 -0.3 480,112 - A4249_RS02275 0.49 -0.5 480,112 - A4249_RS02275 0.49 -0.0 480,112 - A4249_RS02275 0.49 -0.4 480,243 + A4249_RS02275 0.64 -0.0 480,243 + A4249_RS02275 0.64 -0.1 480,288 + A4249_RS02275 0.69 +0.1 480,288 + A4249_RS02275 0.69 +0.6 480,289 - A4249_RS02275 0.69 +0.1 480,289 - A4249_RS02275 0.69 +0.1 480,289 - A4249_RS02275 0.69 +0.2 480,289 - A4249_RS02275 0.69 +0.4 480,289 - A4249_RS02275 0.69 -0.4 480,289 - A4249_RS02275 0.69 +1.0
Or see this region's nucleotide sequence