Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00925 and A4249_RS00930 are separated by 22 nucleotides A4249_RS00930 and A4249_RS17015 are separated by 35 nucleotides A4249_RS17015 and A4249_RS00935 are separated by 4 nucleotides A4249_RS00935 and A4249_RS00940 are separated by 84 nucleotides
A4249_RS00925: A4249_RS00925 - multidrug efflux SMR transporter, at 170,310 to 170,630
_RS00925
A4249_RS00930: A4249_RS00930 - glutathione S-transferase family protein, at 170,653 to 171,321
_RS00930
A4249_RS17015: A4249_RS17015 - hypothetical protein, at 171,357 to 171,488
_RS17015
A4249_RS00935: A4249_RS00935 - lytic transglycosylase domain-containing protein, at 171,493 to 173,178
_RS00935
A4249_RS00940: A4249_RS00940 - uracil-DNA glycosylase, at 173,263 to 174,075
_RS00940
Position (kb) 171
172
173
174 Strain fitness (log2 ratio) -1
0
1 at 170.680 kb on + strand at 170.680 kb on + strand at 170.681 kb on - strand at 170.681 kb on - strand at 171.092 kb on + strand, within A4249_RS00930 at 171.092 kb on + strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.093 kb on - strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.121 kb on + strand, within A4249_RS00930 at 171.122 kb on - strand, within A4249_RS00930 at 171.122 kb on - strand, within A4249_RS00930 at 171.236 kb on - strand, within A4249_RS00930 at 171.236 kb on - strand, within A4249_RS00930 at 171.236 kb on - strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.248 kb on + strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.249 kb on - strand, within A4249_RS00930 at 171.330 kb on + strand at 171.330 kb on + strand at 171.330 kb on + strand at 171.331 kb on - strand at 171.344 kb on + strand at 171.344 kb on + strand at 171.344 kb on + strand at 171.427 kb on - strand, within A4249_RS17015 at 171.486 kb on + strand at 171.487 kb on - strand at 171.487 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.564 kb on - strand at 171.644 kb on + strand at 171.644 kb on + strand at 171.644 kb on + strand at 171.644 kb on + strand at 171.644 kb on + strand at 171.644 kb on + strand at 171.644 kb on + strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.645 kb on - strand at 171.653 kb on + strand at 171.654 kb on - strand at 171.654 kb on - strand at 171.654 kb on - strand at 171.677 kb on + strand, within A4249_RS00935 at 171.677 kb on + strand, within A4249_RS00935 at 171.678 kb on - strand, within A4249_RS00935 at 171.678 kb on - strand, within A4249_RS00935 at 171.678 kb on - strand, within A4249_RS00935 at 171.678 kb on - strand, within A4249_RS00935 at 171.678 kb on - strand, within A4249_RS00935 at 171.782 kb on + strand, within A4249_RS00935 at 171.782 kb on + strand, within A4249_RS00935 at 171.782 kb on + strand, within A4249_RS00935 at 171.782 kb on + strand, within A4249_RS00935 at 171.782 kb on + strand, within A4249_RS00935 at 171.782 kb on + strand, within A4249_RS00935 at 171.783 kb on - strand, within A4249_RS00935 at 171.783 kb on - strand, within A4249_RS00935 at 171.783 kb on - strand, within A4249_RS00935 at 171.783 kb on - strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.845 kb on + strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.846 kb on - strand, within A4249_RS00935 at 171.962 kb on + strand, within A4249_RS00935 at 171.963 kb on - strand, within A4249_RS00935 at 172.022 kb on + strand, within A4249_RS00935 at 172.022 kb on + strand, within A4249_RS00935 at 172.022 kb on + strand, within A4249_RS00935 at 172.022 kb on + strand, within A4249_RS00935 at 172.022 kb on + strand, within A4249_RS00935 at 172.023 kb on - strand, within A4249_RS00935 at 172.023 kb on - strand, within A4249_RS00935 at 172.023 kb on - strand, within A4249_RS00935 at 172.023 kb on - strand, within A4249_RS00935 at 172.023 kb on - strand, within A4249_RS00935 at 172.023 kb on - strand, within A4249_RS00935 at 172.079 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.229 kb on + strand, within A4249_RS00935 at 172.230 kb on - strand, within A4249_RS00935 at 172.230 kb on - strand, within A4249_RS00935 at 172.230 kb on - strand, within A4249_RS00935 at 172.230 kb on - strand, within A4249_RS00935 at 172.230 kb on - strand, within A4249_RS00935 at 172.230 kb on - strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.316 kb on + strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.317 kb on - strand, within A4249_RS00935 at 172.350 kb on - strand, within A4249_RS00935 at 172.415 kb on + strand, within A4249_RS00935 at 172.415 kb on + strand, within A4249_RS00935 at 172.415 kb on + strand, within A4249_RS00935 at 172.415 kb on + strand, within A4249_RS00935 at 172.415 kb on + strand, within A4249_RS00935 at 172.415 kb on + strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.416 kb on - strand, within A4249_RS00935 at 172.451 kb on + strand, within A4249_RS00935 at 172.451 kb on + strand, within A4249_RS00935 at 172.451 kb on + strand, within A4249_RS00935 at 172.451 kb on + strand, within A4249_RS00935 at 172.451 kb on + strand, within A4249_RS00935 at 172.452 kb on - strand, within A4249_RS00935 at 172.452 kb on - strand, within A4249_RS00935 at 172.452 kb on - strand, within A4249_RS00935 at 172.452 kb on - strand, within A4249_RS00935 at 172.452 kb on - strand, within A4249_RS00935 at 172.452 kb on - strand, within A4249_RS00935 at 172.676 kb on + strand, within A4249_RS00935 at 172.676 kb on + strand, within A4249_RS00935 at 172.676 kb on + strand, within A4249_RS00935 at 172.677 kb on - strand, within A4249_RS00935 at 172.821 kb on + strand, within A4249_RS00935 at 172.821 kb on + strand, within A4249_RS00935 at 172.821 kb on + strand, within A4249_RS00935 at 172.821 kb on + strand, within A4249_RS00935 at 172.822 kb on - strand, within A4249_RS00935 at 172.822 kb on - strand, within A4249_RS00935 at 172.822 kb on - strand, within A4249_RS00935 at 172.824 kb on - strand, within A4249_RS00935 at 172.824 kb on - strand, within A4249_RS00935 at 172.853 kb on + strand, within A4249_RS00935 at 172.853 kb on + strand, within A4249_RS00935 at 172.854 kb on - strand, within A4249_RS00935 at 172.854 kb on - strand, within A4249_RS00935 at 172.883 kb on + strand, within A4249_RS00935 at 172.883 kb on + strand, within A4249_RS00935 at 172.883 kb on + strand, within A4249_RS00935 at 172.883 kb on + strand, within A4249_RS00935 at 172.883 kb on + strand, within A4249_RS00935 at 172.884 kb on - strand, within A4249_RS00935 at 172.884 kb on - strand, within A4249_RS00935 at 172.884 kb on - strand, within A4249_RS00935 at 172.884 kb on - strand, within A4249_RS00935 at 172.884 kb on - strand, within A4249_RS00935 at 173.018 kb on + strand at 173.018 kb on + strand at 173.018 kb on + strand at 173.019 kb on - strand at 173.090 kb on + strand at 173.178 kb on + strand at 173.178 kb on + strand at 173.179 kb on - strand at 173.179 kb on - strand at 173.179 kb on - strand at 173.209 kb on + strand at 173.210 kb on - strand at 173.226 kb on + strand at 173.226 kb on + strand at 173.226 kb on + strand at 173.264 kb on + strand at 173.264 kb on + strand at 173.264 kb on + strand at 174.132 kb on + strand at 174.144 kb on + strand at 174.145 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 170,680 + +0.8 170,680 + +0.3 170,681 - -0.1 170,681 - +0.7 171,092 + A4249_RS00930 0.66 -0.1 171,092 + A4249_RS00930 0.66 +0.3 171,093 - A4249_RS00930 0.66 -0.3 171,093 - A4249_RS00930 0.66 -0.0 171,093 - A4249_RS00930 0.66 +0.2 171,093 - A4249_RS00930 0.66 -0.0 171,121 + A4249_RS00930 0.70 +0.2 171,121 + A4249_RS00930 0.70 +0.6 171,121 + A4249_RS00930 0.70 -0.1 171,121 + A4249_RS00930 0.70 -0.2 171,121 + A4249_RS00930 0.70 -0.2 171,121 + A4249_RS00930 0.70 -0.0 171,122 - A4249_RS00930 0.70 +0.6 171,122 - A4249_RS00930 0.70 -0.0 171,236 - A4249_RS00930 0.87 -0.5 171,236 - A4249_RS00930 0.87 -1.2 171,236 - A4249_RS00930 0.87 +0.3 171,248 + A4249_RS00930 0.89 +0.1 171,248 + A4249_RS00930 0.89 +0.2 171,248 + A4249_RS00930 0.89 +0.2 171,248 + A4249_RS00930 0.89 -0.4 171,249 - A4249_RS00930 0.89 -0.1 171,249 - A4249_RS00930 0.89 -0.7 171,249 - A4249_RS00930 0.89 -0.1 171,249 - A4249_RS00930 0.89 -0.8 171,249 - A4249_RS00930 0.89 +0.6 171,330 + -0.1 171,330 + -0.1 171,330 + -0.5 171,331 - +0.0 171,344 + -0.1 171,344 + +0.1 171,344 + +0.4 171,427 - A4249_RS17015 0.53 -0.2 171,486 + -0.5 171,487 - +0.2 171,487 - -0.0 171,564 - +0.3 171,564 - +0.4 171,564 - +0.8 171,564 - +0.3 171,564 - -0.0 171,644 + -0.4 171,644 + +0.5 171,644 + -0.2 171,644 + +0.3 171,644 + -0.2 171,644 + -0.0 171,644 + -0.2 171,645 - +0.2 171,645 - +0.3 171,645 - -0.5 171,645 - -1.1 171,645 - +0.0 171,645 - -0.5 171,645 - +0.3 171,645 - -0.3 171,645 - +0.2 171,645 - -1.4 171,645 - +0.0 171,653 + +0.1 171,654 - -0.2 171,654 - -0.3 171,654 - +0.3 171,677 + A4249_RS00935 0.11 -0.1 171,677 + A4249_RS00935 0.11 -0.3 171,678 - A4249_RS00935 0.11 -0.7 171,678 - A4249_RS00935 0.11 -0.1 171,678 - A4249_RS00935 0.11 -0.3 171,678 - A4249_RS00935 0.11 -1.0 171,678 - A4249_RS00935 0.11 +0.2 171,782 + A4249_RS00935 0.17 -0.2 171,782 + A4249_RS00935 0.17 +0.3 171,782 + A4249_RS00935 0.17 +0.1 171,782 + A4249_RS00935 0.17 -0.1 171,782 + A4249_RS00935 0.17 -0.1 171,782 + A4249_RS00935 0.17 -0.4 171,783 - A4249_RS00935 0.17 -0.0 171,783 - A4249_RS00935 0.17 -0.1 171,783 - A4249_RS00935 0.17 -0.2 171,783 - A4249_RS00935 0.17 -0.5 171,845 + A4249_RS00935 0.21 +0.1 171,845 + A4249_RS00935 0.21 -0.0 171,845 + A4249_RS00935 0.21 -1.1 171,845 + A4249_RS00935 0.21 +0.1 171,845 + A4249_RS00935 0.21 +0.2 171,845 + A4249_RS00935 0.21 -0.7 171,845 + A4249_RS00935 0.21 -0.1 171,845 + A4249_RS00935 0.21 +0.5 171,845 + A4249_RS00935 0.21 +0.1 171,845 + A4249_RS00935 0.21 +0.0 171,846 - A4249_RS00935 0.21 -0.1 171,846 - A4249_RS00935 0.21 -0.3 171,846 - A4249_RS00935 0.21 -0.1 171,846 - A4249_RS00935 0.21 -1.3 171,846 - A4249_RS00935 0.21 -0.1 171,846 - A4249_RS00935 0.21 +0.0 171,846 - A4249_RS00935 0.21 +1.0 171,846 - A4249_RS00935 0.21 +0.1 171,962 + A4249_RS00935 0.28 +0.1 171,963 - A4249_RS00935 0.28 -0.1 172,022 + A4249_RS00935 0.31 -0.0 172,022 + A4249_RS00935 0.31 -0.2 172,022 + A4249_RS00935 0.31 +1.0 172,022 + A4249_RS00935 0.31 +0.1 172,022 + A4249_RS00935 0.31 -0.5 172,023 - A4249_RS00935 0.31 +0.1 172,023 - A4249_RS00935 0.31 -0.8 172,023 - A4249_RS00935 0.31 +0.3 172,023 - A4249_RS00935 0.31 +0.3 172,023 - A4249_RS00935 0.31 +0.3 172,023 - A4249_RS00935 0.31 -0.1 172,079 + A4249_RS00935 0.35 +0.1 172,229 + A4249_RS00935 0.44 -0.4 172,229 + A4249_RS00935 0.44 +0.5 172,229 + A4249_RS00935 0.44 +0.1 172,229 + A4249_RS00935 0.44 -0.2 172,229 + A4249_RS00935 0.44 +0.2 172,229 + A4249_RS00935 0.44 -0.3 172,229 + A4249_RS00935 0.44 +0.7 172,229 + A4249_RS00935 0.44 +1.4 172,230 - A4249_RS00935 0.44 +0.0 172,230 - A4249_RS00935 0.44 -0.2 172,230 - A4249_RS00935 0.44 -0.2 172,230 - A4249_RS00935 0.44 +0.6 172,230 - A4249_RS00935 0.44 -0.1 172,230 - A4249_RS00935 0.44 -0.3 172,316 + A4249_RS00935 0.49 +0.1 172,316 + A4249_RS00935 0.49 -0.7 172,316 + A4249_RS00935 0.49 +0.2 172,316 + A4249_RS00935 0.49 -0.1 172,316 + A4249_RS00935 0.49 -0.3 172,316 + A4249_RS00935 0.49 +0.1 172,316 + A4249_RS00935 0.49 -0.3 172,316 + A4249_RS00935 0.49 -0.1 172,316 + A4249_RS00935 0.49 -0.3 172,316 + A4249_RS00935 0.49 +0.2 172,316 + A4249_RS00935 0.49 -0.1 172,317 - A4249_RS00935 0.49 -0.0 172,317 - A4249_RS00935 0.49 -0.4 172,317 - A4249_RS00935 0.49 -0.7 172,317 - A4249_RS00935 0.49 -0.1 172,317 - A4249_RS00935 0.49 +0.2 172,317 - A4249_RS00935 0.49 +0.1 172,317 - A4249_RS00935 0.49 +0.1 172,350 - A4249_RS00935 0.51 -0.2 172,415 + A4249_RS00935 0.55 +0.4 172,415 + A4249_RS00935 0.55 -0.3 172,415 + A4249_RS00935 0.55 -0.3 172,415 + A4249_RS00935 0.55 -0.2 172,415 + A4249_RS00935 0.55 -0.2 172,415 + A4249_RS00935 0.55 +0.0 172,416 - A4249_RS00935 0.55 -0.1 172,416 - A4249_RS00935 0.55 +0.2 172,416 - A4249_RS00935 0.55 -0.2 172,416 - A4249_RS00935 0.55 -0.1 172,416 - A4249_RS00935 0.55 -0.9 172,416 - A4249_RS00935 0.55 +0.0 172,416 - A4249_RS00935 0.55 -0.4 172,416 - A4249_RS00935 0.55 -0.1 172,416 - A4249_RS00935 0.55 +0.2 172,451 + A4249_RS00935 0.57 -0.1 172,451 + A4249_RS00935 0.57 +0.4 172,451 + A4249_RS00935 0.57 +0.4 172,451 + A4249_RS00935 0.57 -0.0 172,451 + A4249_RS00935 0.57 -0.1 172,452 - A4249_RS00935 0.57 -1.4 172,452 - A4249_RS00935 0.57 +0.4 172,452 - A4249_RS00935 0.57 +0.0 172,452 - A4249_RS00935 0.57 +0.1 172,452 - A4249_RS00935 0.57 -0.7 172,452 - A4249_RS00935 0.57 +0.1 172,676 + A4249_RS00935 0.70 +0.2 172,676 + A4249_RS00935 0.70 +0.5 172,676 + A4249_RS00935 0.70 -0.4 172,677 - A4249_RS00935 0.70 +0.3 172,821 + A4249_RS00935 0.79 -0.6 172,821 + A4249_RS00935 0.79 -0.0 172,821 + A4249_RS00935 0.79 +0.3 172,821 + A4249_RS00935 0.79 +0.1 172,822 - A4249_RS00935 0.79 -0.1 172,822 - A4249_RS00935 0.79 +0.4 172,822 - A4249_RS00935 0.79 +0.5 172,824 - A4249_RS00935 0.79 -0.2 172,824 - A4249_RS00935 0.79 +0.0 172,853 + A4249_RS00935 0.81 -0.1 172,853 + A4249_RS00935 0.81 +0.3 172,854 - A4249_RS00935 0.81 +0.6 172,854 - A4249_RS00935 0.81 +0.2 172,883 + A4249_RS00935 0.82 +0.0 172,883 + A4249_RS00935 0.82 -0.1 172,883 + A4249_RS00935 0.82 +0.0 172,883 + A4249_RS00935 0.82 +0.7 172,883 + A4249_RS00935 0.82 +0.4 172,884 - A4249_RS00935 0.83 -1.1 172,884 - A4249_RS00935 0.83 -0.3 172,884 - A4249_RS00935 0.83 +1.5 172,884 - A4249_RS00935 0.83 -0.2 172,884 - A4249_RS00935 0.83 -0.6 173,018 + +0.2 173,018 + +0.2 173,018 + -0.2 173,019 - -0.1 173,090 + -0.0 173,178 + +0.3 173,178 + -0.3 173,179 - +0.4 173,179 - -1.0 173,179 - -0.3 173,209 + -0.2 173,210 - +0.3 173,226 + -0.4 173,226 + -0.2 173,226 + -0.3 173,264 + +0.1 173,264 + +0.1 173,264 + +0.4 174,132 + -1.2 174,144 + -0.4 174,145 - +0.1
Or see this region's nucleotide sequence