Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00780 and A4249_RS00785 are separated by 136 nucleotides A4249_RS00785 and A4249_RS00790 overlap by 1 nucleotides A4249_RS00790 and A4249_RS00800 are separated by 274 nucleotides A4249_RS00800 and A4249_RS00805 are separated by 10 nucleotides A4249_RS00805 and A4249_RS00810 overlap by 22 nucleotides
A4249_RS00780: A4249_RS00780 - transketolase, at 147,713 to 149,662
_RS00780
A4249_RS00785: A4249_RS00785 - hypothetical protein, at 149,799 to 150,062
_RS00785
A4249_RS00790: A4249_RS00790 - cell division protein ZapA, at 150,062 to 150,385
_RS00790
A4249_RS00800: A4249_RS00800 - 5-formyltetrahydrofolate cyclo-ligase, at 150,660 to 151,232
_RS00800
A4249_RS00805: A4249_RS00805 - TIGR00282 family metallophosphoesterase, at 151,243 to 152,064
_RS00805
A4249_RS00810: A4249_RS00810 - glycosyltransferase family 4 protein, at 152,043 to 153,134
_RS00810
Position (kb) 150
151
152 Strain fitness (log2 ratio) -1
0
1
2 at 149.752 kb on - strand at 149.774 kb on + strand at 149.774 kb on + strand at 149.775 kb on - strand at 149.775 kb on - strand at 149.775 kb on - strand at 149.776 kb on + strand at 149.777 kb on - strand at 149.777 kb on - strand at 149.785 kb on + strand at 150.098 kb on + strand, within A4249_RS00790 at 150.098 kb on + strand, within A4249_RS00790 at 150.098 kb on + strand, within A4249_RS00790 at 150.099 kb on - strand, within A4249_RS00790 at 150.099 kb on - strand, within A4249_RS00790 at 150.383 kb on + strand at 150.384 kb on - strand at 150.384 kb on - strand at 150.391 kb on + strand at 150.391 kb on + strand at 150.479 kb on + strand at 150.480 kb on - strand at 150.480 kb on - strand at 150.480 kb on - strand at 150.493 kb on + strand at 150.493 kb on + strand at 150.494 kb on - strand at 150.542 kb on + strand at 150.578 kb on + strand at 150.578 kb on + strand at 150.578 kb on + strand at 150.579 kb on - strand at 150.633 kb on - strand at 150.633 kb on - strand at 150.671 kb on + strand at 150.819 kb on + strand, within A4249_RS00800 at 151.083 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.086 kb on + strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.087 kb on - strand, within A4249_RS00800 at 151.137 kb on + strand, within A4249_RS00800 at 151.216 kb on - strand at 151.217 kb on + strand at 151.217 kb on + strand at 151.217 kb on + strand at 151.217 kb on + strand at 151.218 kb on - strand at 151.218 kb on - strand at 151.474 kb on + strand, within A4249_RS00805 at 151.474 kb on + strand, within A4249_RS00805 at 152.133 kb on - strand at 152.149 kb on + strand at 152.149 kb on + strand at 152.149 kb on + strand at 152.149 kb on + strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.150 kb on - strand at 152.220 kb on + strand, within A4249_RS00810 at 152.221 kb on - strand, within A4249_RS00810
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 149,752 - +0.4 149,774 + +0.1 149,774 + -0.1 149,775 - -0.3 149,775 - -0.1 149,775 - +0.2 149,776 + +0.1 149,777 - +0.2 149,777 - +0.1 149,785 + +0.1 150,098 + A4249_RS00790 0.11 +0.3 150,098 + A4249_RS00790 0.11 -0.2 150,098 + A4249_RS00790 0.11 +0.4 150,099 - A4249_RS00790 0.11 -0.1 150,099 - A4249_RS00790 0.11 -0.1 150,383 + -0.4 150,384 - -0.7 150,384 - +0.6 150,391 + -0.5 150,391 + +0.1 150,479 + +0.6 150,480 - +0.7 150,480 - +0.5 150,480 - +1.6 150,493 + -0.0 150,493 + +1.4 150,494 - +0.1 150,542 + -0.4 150,578 + +0.8 150,578 + +0.2 150,578 + +2.6 150,579 - -0.2 150,633 - -0.5 150,633 - +0.7 150,671 + +0.3 150,819 + A4249_RS00800 0.28 +0.1 151,083 + A4249_RS00800 0.74 +0.0 151,086 + A4249_RS00800 0.74 +0.1 151,086 + A4249_RS00800 0.74 +0.2 151,086 + A4249_RS00800 0.74 +0.1 151,086 + A4249_RS00800 0.74 +0.5 151,086 + A4249_RS00800 0.74 -1.7 151,087 - A4249_RS00800 0.75 +0.2 151,087 - A4249_RS00800 0.75 -0.1 151,087 - A4249_RS00800 0.75 -0.1 151,087 - A4249_RS00800 0.75 +0.3 151,137 + A4249_RS00800 0.83 -0.5 151,216 - -0.4 151,217 + +0.8 151,217 + -0.4 151,217 + +0.2 151,217 + -0.2 151,218 - +0.2 151,218 - +0.3 151,474 + A4249_RS00805 0.28 +1.6 151,474 + A4249_RS00805 0.28 +0.3 152,133 - +0.6 152,149 + +0.3 152,149 + +0.4 152,149 + +0.5 152,149 + +0.2 152,150 - -0.5 152,150 - +0.1 152,150 - -0.1 152,150 - -0.1 152,150 - -0.1 152,150 - +0.1 152,150 - -0.6 152,150 - -0.6 152,150 - +0.4 152,150 - +0.3 152,150 - -0.8 152,220 + A4249_RS00810 0.16 -0.5 152,221 - A4249_RS00810 0.16 -0.8
Or see this region's nucleotide sequence