Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00740 and A4249_RS00745 are separated by 41 nucleotides A4249_RS00745 and A4249_RS00750 are separated by 50 nucleotides A4249_RS00750 and A4249_RS00755 are separated by 1 nucleotides A4249_RS00755 and A4249_RS00760 overlap by 17 nucleotides
A4249_RS00740: A4249_RS00740 - HAD family hydrolase, at 139,733 to 140,434
_RS00740
A4249_RS00745: A4249_RS00745 - SDR family NAD(P)-dependent oxidoreductase, at 140,476 to 141,186
_RS00745
A4249_RS00750: A4249_RS00750 - S41 family peptidase, at 141,237 to 142,508
_RS00750
A4249_RS00755: A4249_RS00755 - YbdD/YjiX family protein, at 142,510 to 142,749
_RS00755
A4249_RS00760: A4249_RS00760 - carbon starvation CstA family protein, at 142,733 to 144,820
_RS00760
Position (kb) 141
142
143 Strain fitness (log2 ratio) -2
-1
0
1
2 at 140.268 kb on + strand, within A4249_RS00740 at 140.268 kb on + strand, within A4249_RS00740 at 140.269 kb on - strand, within A4249_RS00740 at 140.269 kb on - strand, within A4249_RS00740 at 140.445 kb on + strand at 140.446 kb on - strand at 140.779 kb on + strand, within A4249_RS00745 at 140.921 kb on - strand, within A4249_RS00745 at 140.964 kb on - strand, within A4249_RS00745 at 140.964 kb on - strand, within A4249_RS00745 at 141.038 kb on + strand, within A4249_RS00745 at 141.038 kb on + strand, within A4249_RS00745 at 141.038 kb on + strand, within A4249_RS00745 at 141.038 kb on + strand, within A4249_RS00745 at 141.038 kb on + strand, within A4249_RS00745 at 141.039 kb on - strand, within A4249_RS00745 at 141.039 kb on - strand, within A4249_RS00745 at 141.039 kb on - strand, within A4249_RS00745 at 141.039 kb on - strand, within A4249_RS00745 at 141.039 kb on - strand, within A4249_RS00745 at 141.039 kb on - strand, within A4249_RS00745 at 141.184 kb on + strand at 141.185 kb on - strand at 141.346 kb on + strand at 141.426 kb on + strand, within A4249_RS00750 at 141.427 kb on - strand, within A4249_RS00750 at 141.427 kb on - strand, within A4249_RS00750 at 141.427 kb on - strand, within A4249_RS00750 at 141.427 kb on - strand, within A4249_RS00750 at 141.427 kb on - strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.429 kb on + strand, within A4249_RS00750 at 141.430 kb on - strand, within A4249_RS00750 at 141.430 kb on - strand, within A4249_RS00750 at 141.430 kb on - strand, within A4249_RS00750 at 141.430 kb on - strand, within A4249_RS00750 at 141.430 kb on - strand, within A4249_RS00750 at 141.430 kb on - strand, within A4249_RS00750 at 141.520 kb on - strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 142.506 kb on + strand at 142.506 kb on + strand at 142.507 kb on - strand at 142.507 kb on - strand at 142.507 kb on - strand at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.634 kb on + strand, within A4249_RS00755 at 142.821 kb on + strand at 142.822 kb on - strand at 142.848 kb on + strand at 142.849 kb on - strand at 142.849 kb on - strand at 142.849 kb on - strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.906 kb on - strand at 142.906 kb on - strand at 142.906 kb on - strand at 142.986 kb on + strand, within A4249_RS00760 at 142.986 kb on + strand, within A4249_RS00760 at 142.986 kb on + strand, within A4249_RS00760 at 143.200 kb on + strand, within A4249_RS00760 at 143.201 kb on - strand, within A4249_RS00760 at 143.235 kb on + strand, within A4249_RS00760 at 143.236 kb on - strand, within A4249_RS00760 at 143.244 kb on + strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.421 kb on + strand, within A4249_RS00760
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 140,268 + A4249_RS00740 0.76 +0.1 140,268 + A4249_RS00740 0.76 +0.5 140,269 - A4249_RS00740 0.76 +0.4 140,269 - A4249_RS00740 0.76 +0.5 140,445 + -0.0 140,446 - -0.2 140,779 + A4249_RS00745 0.43 +0.1 140,921 - A4249_RS00745 0.63 -0.5 140,964 - A4249_RS00745 0.69 +0.5 140,964 - A4249_RS00745 0.69 +0.7 141,038 + A4249_RS00745 0.79 +0.8 141,038 + A4249_RS00745 0.79 -0.4 141,038 + A4249_RS00745 0.79 +0.6 141,038 + A4249_RS00745 0.79 -0.1 141,038 + A4249_RS00745 0.79 -0.9 141,039 - A4249_RS00745 0.79 -0.2 141,039 - A4249_RS00745 0.79 -0.1 141,039 - A4249_RS00745 0.79 -0.2 141,039 - A4249_RS00745 0.79 -0.0 141,039 - A4249_RS00745 0.79 -0.1 141,039 - A4249_RS00745 0.79 +0.4 141,184 + +0.2 141,185 - +0.2 141,346 + +0.8 141,426 + A4249_RS00750 0.15 +0.3 141,427 - A4249_RS00750 0.15 +1.5 141,427 - A4249_RS00750 0.15 -2.5 141,427 - A4249_RS00750 0.15 -0.6 141,427 - A4249_RS00750 0.15 +0.1 141,427 - A4249_RS00750 0.15 +0.3 141,429 + A4249_RS00750 0.15 -0.8 141,429 + A4249_RS00750 0.15 +0.1 141,429 + A4249_RS00750 0.15 -0.3 141,429 + A4249_RS00750 0.15 -0.3 141,429 + A4249_RS00750 0.15 +0.0 141,429 + A4249_RS00750 0.15 -0.1 141,429 + A4249_RS00750 0.15 -0.4 141,429 + A4249_RS00750 0.15 +0.2 141,430 - A4249_RS00750 0.15 +0.2 141,430 - A4249_RS00750 0.15 -0.1 141,430 - A4249_RS00750 0.15 -1.7 141,430 - A4249_RS00750 0.15 -0.1 141,430 - A4249_RS00750 0.15 +0.2 141,430 - A4249_RS00750 0.15 -0.4 141,520 - A4249_RS00750 0.22 +0.5 141,777 + A4249_RS00750 0.42 -0.4 141,777 + A4249_RS00750 0.42 -0.3 141,777 + A4249_RS00750 0.42 +0.4 141,777 + A4249_RS00750 0.42 -0.4 141,777 + A4249_RS00750 0.42 -1.4 141,777 + A4249_RS00750 0.42 -1.5 141,777 + A4249_RS00750 0.42 +0.2 141,777 + A4249_RS00750 0.42 -0.3 141,777 + A4249_RS00750 0.42 +0.9 141,777 + A4249_RS00750 0.42 -0.9 141,777 + A4249_RS00750 0.42 -0.6 141,778 - A4249_RS00750 0.43 +0.9 141,778 - A4249_RS00750 0.43 -0.7 141,778 - A4249_RS00750 0.43 -0.5 141,778 - A4249_RS00750 0.43 +0.3 141,778 - A4249_RS00750 0.43 -0.0 141,778 - A4249_RS00750 0.43 -0.2 141,778 - A4249_RS00750 0.43 -0.4 141,778 - A4249_RS00750 0.43 -0.7 141,778 - A4249_RS00750 0.43 -0.9 141,778 - A4249_RS00750 0.43 +0.6 142,506 + -0.3 142,506 + -0.3 142,507 - -0.2 142,507 - +0.5 142,507 - -0.1 142,625 + A4249_RS00755 0.48 -0.3 142,625 + A4249_RS00755 0.48 +0.1 142,625 + A4249_RS00755 0.48 +0.2 142,625 + A4249_RS00755 0.48 +0.8 142,625 + A4249_RS00755 0.48 +0.0 142,626 - A4249_RS00755 0.48 -0.1 142,626 - A4249_RS00755 0.48 -0.6 142,626 - A4249_RS00755 0.48 +1.0 142,626 - A4249_RS00755 0.48 -0.2 142,634 + A4249_RS00755 0.52 +0.3 142,821 + -0.0 142,822 - +0.2 142,848 + +0.2 142,849 - +0.4 142,849 - -0.3 142,849 - +0.3 142,905 + -1.2 142,905 + +1.2 142,905 + +0.3 142,905 + +0.4 142,905 + +1.3 142,905 + -1.3 142,906 - -0.4 142,906 - -0.8 142,906 - -0.7 142,986 + A4249_RS00760 0.12 -0.2 142,986 + A4249_RS00760 0.12 +2.0 142,986 + A4249_RS00760 0.12 +0.1 143,200 + A4249_RS00760 0.22 +0.5 143,201 - A4249_RS00760 0.22 -2.4 143,235 + A4249_RS00760 0.24 +0.9 143,236 - A4249_RS00760 0.24 -0.3 143,244 + A4249_RS00760 0.24 -0.3 143,245 - A4249_RS00760 0.25 -0.2 143,245 - A4249_RS00760 0.25 +2.1 143,245 - A4249_RS00760 0.25 +0.3 143,245 - A4249_RS00760 0.25 +0.1 143,245 - A4249_RS00760 0.25 +0.3 143,421 + A4249_RS00760 0.33 +1.8
Or see this region's nucleotide sequence