Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00685

Experiment: Adenine 0.74 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00680 and A4249_RS00685 are separated by 69 nucleotidesA4249_RS00685 and A4249_RS00690 are separated by 124 nucleotides A4249_RS00680: A4249_RS00680 - thioredoxin-disulfide reductase, at 126,208 to 127,215 _RS00680 A4249_RS00685: A4249_RS00685 - hypothetical protein, at 127,285 to 127,575 _RS00685 A4249_RS00690: A4249_RS00690 - mitochondrial fission ELM1 family protein, at 127,700 to 128,680 _RS00690 Position (kb) 127 128Strain fitness (log2 ratio) -1 0 1 2at 127.222 kb on + strandat 127.223 kb on - strandat 127.254 kb on + strandat 127.254 kb on + strandat 127.255 kb on - strandat 127.255 kb on - strandat 127.255 kb on - strandat 127.255 kb on - strandat 127.255 kb on - strandat 127.365 kb on - strand, within A4249_RS00685at 127.365 kb on - strand, within A4249_RS00685at 127.365 kb on - strand, within A4249_RS00685at 127.380 kb on - strand, within A4249_RS00685at 127.380 kb on - strand, within A4249_RS00685at 127.500 kb on + strand, within A4249_RS00685at 127.500 kb on + strand, within A4249_RS00685at 127.500 kb on + strand, within A4249_RS00685at 127.500 kb on + strand, within A4249_RS00685at 127.501 kb on - strand, within A4249_RS00685at 127.501 kb on - strand, within A4249_RS00685at 127.597 kb on + strandat 127.597 kb on + strandat 127.598 kb on - strandat 127.598 kb on - strandat 127.598 kb on - strandat 127.598 kb on - strandat 127.598 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C)
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127,222 + +0.8
127,223 - +0.2
127,254 + -0.9
127,254 + -0.1
127,255 - +0.1
127,255 - -1.2
127,255 - +1.8
127,255 - +1.1
127,255 - -0.1
127,365 - A4249_RS00685 0.27 -0.2
127,365 - A4249_RS00685 0.27 +0.8
127,365 - A4249_RS00685 0.27 +0.3
127,380 - A4249_RS00685 0.33 +0.6
127,380 - A4249_RS00685 0.33 -0.3
127,500 + A4249_RS00685 0.74 +0.4
127,500 + A4249_RS00685 0.74 -0.4
127,500 + A4249_RS00685 0.74 -0.6
127,500 + A4249_RS00685 0.74 -0.1
127,501 - A4249_RS00685 0.74 +0.1
127,501 - A4249_RS00685 0.74 -0.1
127,597 + -0.8
127,597 + -0.2
127,598 - -0.1
127,598 - -0.5
127,598 - +0.7
127,598 - +1.6
127,598 - +0.9

Or see this region's nucleotide sequence