Experiment: Adenine 0.74 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00460 and A4249_RS00465 are separated by 195 nucleotides A4249_RS00465 and A4249_RS00470 are separated by 95 nucleotides A4249_RS00470 and A4249_RS00475 are separated by 7 nucleotides
A4249_RS00460: A4249_RS00460 - 30S ribosomal protein S4, at 76,794 to 77,411
_RS00460
A4249_RS00465: A4249_RS00465 - hypothetical protein, at 77,607 to 77,987
_RS00465
A4249_RS00470: A4249_RS00470 - bifunctional diguanylate cyclase/phosphodiesterase, at 78,083 to 80,434
_RS00470
A4249_RS00475: A4249_RS00475 - NADH:flavin oxidoreductase/NADH oxidase, at 80,442 to 81,548
_RS00475
Position (kb) 78
79
80
81 Strain fitness (log2 ratio) -2
-1
0
1 at 77.420 kb on + strand at 77.420 kb on + strand at 77.420 kb on + strand at 77.421 kb on - strand at 77.421 kb on - strand at 77.534 kb on + strand at 77.535 kb on - strand at 78.008 kb on + strand at 78.009 kb on - strand at 78.009 kb on - strand at 78.076 kb on + strand at 78.076 kb on + strand at 78.076 kb on + strand at 78.076 kb on + strand at 78.077 kb on - strand at 78.077 kb on - strand at 78.077 kb on - strand at 78.077 kb on - strand at 78.077 kb on - strand at 78.077 kb on - strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.163 kb on + strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.164 kb on - strand at 78.293 kb on + strand at 78.293 kb on + strand at 78.293 kb on + strand at 78.293 kb on + strand at 78.294 kb on - strand at 78.317 kb on + strand at 78.317 kb on + strand at 78.317 kb on + strand at 78.318 kb on - strand at 78.318 kb on - strand at 78.318 kb on - strand at 78.318 kb on - strand at 78.318 kb on - strand at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.458 kb on + strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.459 kb on - strand, within A4249_RS00470 at 78.512 kb on + strand, within A4249_RS00470 at 78.512 kb on + strand, within A4249_RS00470 at 78.513 kb on - strand, within A4249_RS00470 at 78.513 kb on - strand, within A4249_RS00470 at 78.513 kb on - strand, within A4249_RS00470 at 78.513 kb on - strand, within A4249_RS00470 at 78.975 kb on + strand, within A4249_RS00470 at 78.975 kb on + strand, within A4249_RS00470 at 78.975 kb on + strand, within A4249_RS00470 at 78.976 kb on - strand, within A4249_RS00470 at 78.976 kb on - strand, within A4249_RS00470 at 79.076 kb on + strand, within A4249_RS00470 at 79.076 kb on + strand, within A4249_RS00470 at 79.077 kb on - strand, within A4249_RS00470 at 79.077 kb on - strand, within A4249_RS00470 at 79.571 kb on + strand, within A4249_RS00470 at 79.571 kb on + strand, within A4249_RS00470 at 79.571 kb on + strand, within A4249_RS00470 at 79.572 kb on - strand, within A4249_RS00470 at 79.572 kb on - strand, within A4249_RS00470 at 79.572 kb on - strand, within A4249_RS00470 at 79.572 kb on - strand, within A4249_RS00470 at 79.611 kb on - strand, within A4249_RS00470 at 79.726 kb on + strand, within A4249_RS00470 at 79.745 kb on + strand, within A4249_RS00470 at 79.745 kb on + strand, within A4249_RS00470 at 79.745 kb on + strand, within A4249_RS00470 at 79.745 kb on + strand, within A4249_RS00470 at 79.745 kb on + strand, within A4249_RS00470 at 79.745 kb on + strand, within A4249_RS00470 at 79.746 kb on - strand, within A4249_RS00470 at 79.746 kb on - strand, within A4249_RS00470 at 79.746 kb on - strand, within A4249_RS00470 at 79.746 kb on - strand, within A4249_RS00470 at 79.932 kb on + strand, within A4249_RS00470 at 79.932 kb on + strand, within A4249_RS00470 at 79.933 kb on - strand, within A4249_RS00470 at 80.336 kb on + strand at 80.337 kb on - strand at 80.337 kb on - strand at 80.337 kb on - strand at 80.337 kb on - strand at 80.397 kb on + strand at 80.397 kb on + strand at 80.397 kb on + strand at 80.397 kb on + strand at 80.397 kb on + strand at 80.398 kb on - strand at 80.398 kb on - strand at 80.398 kb on - strand at 80.398 kb on - strand at 80.443 kb on + strand at 80.443 kb on + strand at 80.444 kb on - strand at 80.444 kb on - strand at 80.462 kb on - strand at 80.462 kb on - strand at 80.462 kb on - strand at 80.584 kb on - strand, within A4249_RS00475 at 80.584 kb on - strand, within A4249_RS00475 at 80.584 kb on - strand, within A4249_RS00475 at 80.584 kb on - strand, within A4249_RS00475 at 80.584 kb on - strand, within A4249_RS00475 at 80.707 kb on + strand, within A4249_RS00475 at 80.707 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.770 kb on + strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.771 kb on - strand, within A4249_RS00475 at 80.862 kb on + strand, within A4249_RS00475 at 80.862 kb on + strand, within A4249_RS00475 at 80.941 kb on + strand, within A4249_RS00475 at 80.941 kb on + strand, within A4249_RS00475 at 80.941 kb on + strand, within A4249_RS00475 at 80.941 kb on + strand, within A4249_RS00475 at 80.942 kb on - strand, within A4249_RS00475 at 80.942 kb on - strand, within A4249_RS00475 at 80.942 kb on - strand, within A4249_RS00475 at 81.004 kb on + strand, within A4249_RS00475 at 81.274 kb on + strand, within A4249_RS00475 at 81.274 kb on + strand, within A4249_RS00475 at 81.275 kb on - strand, within A4249_RS00475 at 81.275 kb on - strand, within A4249_RS00475 at 81.275 kb on - strand, within A4249_RS00475 at 81.275 kb on - strand, within A4249_RS00475 at 81.275 kb on - strand, within A4249_RS00475
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine 0.74 mM (C) remove 77,420 + +0.1 77,420 + +1.2 77,420 + +1.1 77,421 - +0.2 77,421 - -0.4 77,534 + -1.1 77,535 - +0.5 78,008 + +0.3 78,009 - +0.5 78,009 - -0.0 78,076 + -0.2 78,076 + -0.9 78,076 + -0.4 78,076 + -0.8 78,077 - -0.7 78,077 - -1.3 78,077 - -1.6 78,077 - -0.8 78,077 - +1.0 78,077 - -1.0 78,163 + +0.5 78,163 + +0.4 78,163 + -1.3 78,163 + +0.0 78,163 + +0.1 78,163 + +0.3 78,163 + -0.3 78,163 + -0.3 78,164 - +0.2 78,164 - +0.6 78,164 - +0.6 78,164 - +0.4 78,164 - -0.4 78,164 - +0.0 78,164 - -0.2 78,164 - -0.5 78,164 - +0.3 78,164 - +0.1 78,164 - -0.2 78,293 + +0.4 78,293 + -2.4 78,293 + +1.1 78,293 + -0.5 78,294 - -0.9 78,317 + -0.4 78,317 + +0.0 78,317 + +0.2 78,318 - -0.6 78,318 - +0.7 78,318 - +0.1 78,318 - -1.7 78,318 - -1.1 78,458 + A4249_RS00470 0.16 +0.9 78,458 + A4249_RS00470 0.16 +0.4 78,458 + A4249_RS00470 0.16 -0.2 78,458 + A4249_RS00470 0.16 -0.3 78,458 + A4249_RS00470 0.16 +0.3 78,458 + A4249_RS00470 0.16 -0.2 78,458 + A4249_RS00470 0.16 -0.3 78,458 + A4249_RS00470 0.16 -1.1 78,458 + A4249_RS00470 0.16 +0.1 78,458 + A4249_RS00470 0.16 -0.7 78,459 - A4249_RS00470 0.16 +0.1 78,459 - A4249_RS00470 0.16 -0.0 78,459 - A4249_RS00470 0.16 -0.1 78,459 - A4249_RS00470 0.16 +0.1 78,459 - A4249_RS00470 0.16 -0.5 78,459 - A4249_RS00470 0.16 -0.5 78,459 - A4249_RS00470 0.16 +0.3 78,459 - A4249_RS00470 0.16 +0.6 78,459 - A4249_RS00470 0.16 -0.9 78,459 - A4249_RS00470 0.16 +0.5 78,459 - A4249_RS00470 0.16 -0.5 78,512 + A4249_RS00470 0.18 +0.5 78,512 + A4249_RS00470 0.18 +0.2 78,513 - A4249_RS00470 0.18 +0.5 78,513 - A4249_RS00470 0.18 +0.4 78,513 - A4249_RS00470 0.18 -1.3 78,513 - A4249_RS00470 0.18 +0.4 78,975 + A4249_RS00470 0.38 -0.2 78,975 + A4249_RS00470 0.38 -0.7 78,975 + A4249_RS00470 0.38 -1.0 78,976 - A4249_RS00470 0.38 -0.2 78,976 - A4249_RS00470 0.38 -0.6 79,076 + A4249_RS00470 0.42 +0.4 79,076 + A4249_RS00470 0.42 +0.5 79,077 - A4249_RS00470 0.42 -0.1 79,077 - A4249_RS00470 0.42 -0.3 79,571 + A4249_RS00470 0.63 +1.0 79,571 + A4249_RS00470 0.63 +0.2 79,571 + A4249_RS00470 0.63 +0.5 79,572 - A4249_RS00470 0.63 +0.2 79,572 - A4249_RS00470 0.63 -0.1 79,572 - A4249_RS00470 0.63 -0.4 79,572 - A4249_RS00470 0.63 +0.9 79,611 - A4249_RS00470 0.65 +0.6 79,726 + A4249_RS00470 0.70 +0.6 79,745 + A4249_RS00470 0.71 -0.4 79,745 + A4249_RS00470 0.71 -1.3 79,745 + A4249_RS00470 0.71 -0.4 79,745 + A4249_RS00470 0.71 +0.3 79,745 + A4249_RS00470 0.71 +0.1 79,745 + A4249_RS00470 0.71 +0.3 79,746 - A4249_RS00470 0.71 +0.0 79,746 - A4249_RS00470 0.71 -0.5 79,746 - A4249_RS00470 0.71 -0.1 79,746 - A4249_RS00470 0.71 -0.5 79,932 + A4249_RS00470 0.79 +0.5 79,932 + A4249_RS00470 0.79 +0.2 79,933 - A4249_RS00470 0.79 -0.9 80,336 + +0.0 80,337 - -0.7 80,337 - +0.6 80,337 - -0.4 80,337 - -1.3 80,397 + -0.1 80,397 + -0.0 80,397 + -0.4 80,397 + -0.1 80,397 + -0.1 80,398 - -0.1 80,398 - -0.9 80,398 - -0.4 80,398 - -0.2 80,443 + -0.8 80,443 + +0.5 80,444 - +0.2 80,444 - +0.5 80,462 - -0.1 80,462 - -0.7 80,462 - +1.3 80,584 - A4249_RS00475 0.13 -0.7 80,584 - A4249_RS00475 0.13 -0.1 80,584 - A4249_RS00475 0.13 +0.6 80,584 - A4249_RS00475 0.13 -0.8 80,584 - A4249_RS00475 0.13 +1.0 80,707 + A4249_RS00475 0.24 -0.6 80,707 + A4249_RS00475 0.24 +0.3 80,770 + A4249_RS00475 0.30 -0.0 80,770 + A4249_RS00475 0.30 +0.2 80,770 + A4249_RS00475 0.30 +0.1 80,770 + A4249_RS00475 0.30 +0.2 80,770 + A4249_RS00475 0.30 -0.6 80,770 + A4249_RS00475 0.30 +0.6 80,770 + A4249_RS00475 0.30 -0.0 80,771 - A4249_RS00475 0.30 +0.3 80,771 - A4249_RS00475 0.30 +0.7 80,771 - A4249_RS00475 0.30 +1.3 80,771 - A4249_RS00475 0.30 +0.1 80,771 - A4249_RS00475 0.30 -0.7 80,771 - A4249_RS00475 0.30 -0.2 80,771 - A4249_RS00475 0.30 +0.9 80,771 - A4249_RS00475 0.30 -0.1 80,771 - A4249_RS00475 0.30 +1.6 80,771 - A4249_RS00475 0.30 -0.0 80,862 + A4249_RS00475 0.38 -0.7 80,862 + A4249_RS00475 0.38 +0.1 80,941 + A4249_RS00475 0.45 +0.1 80,941 + A4249_RS00475 0.45 +1.1 80,941 + A4249_RS00475 0.45 +0.5 80,941 + A4249_RS00475 0.45 +0.3 80,942 - A4249_RS00475 0.45 -0.7 80,942 - A4249_RS00475 0.45 +0.6 80,942 - A4249_RS00475 0.45 -0.1 81,004 + A4249_RS00475 0.51 -0.7 81,274 + A4249_RS00475 0.75 +0.9 81,274 + A4249_RS00475 0.75 -0.3 81,275 - A4249_RS00475 0.75 -0.2 81,275 - A4249_RS00475 0.75 +0.0 81,275 - A4249_RS00475 0.75 -0.9 81,275 - A4249_RS00475 0.75 +0.1 81,275 - A4249_RS00475 0.75 -0.3
Or see this region's nucleotide sequence