Strain Fitness in Escherichia coli ECRC98 around JDDGAC_14090

Experiment: WM_Bas09

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntlpdA and aceF are separated by 207 nucleotidesaceF and aceE are separated by 14 nucleotides JDDGAC_14085: lpdA - dihydrolipoyl dehydrogenase, at 2,612,275 to 2,613,699 lpdA JDDGAC_14090: aceF - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 2,613,907 to 2,615,799 aceF JDDGAC_14095: aceE - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 2,615,814 to 2,618,477 aceE Position (kb) 2613 2614 2615 2616Strain fitness (log2 ratio) -2 -1 0 1at 2613.909 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_Bas09
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2,613,909 - -1.9

Or see this region's nucleotide sequence