Strain Fitness in Escherichia coli ECRC98 around JDDGAC_02685

Experiment: WM_Bas09

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntJDDGAC_02675 and JDDGAC_02680 overlap by 8 nucleotidesJDDGAC_02680 and gp18 overlap by 1 nucleotidesgp18 and tnp-IS3 are separated by 121 nucleotides JDDGAC_02675: JDDGAC_02675 - phage tail tape measure protein, at 468,649 to 471,891 _02675 JDDGAC_02680: JDDGAC_02680 - phage tail protein, at 471,884 to 472,225 _02680 JDDGAC_02685: gp18 - phage minor tail protein L, at 472,225 to 472,662 gp18 JDDGAC_02690: tnp-IS3 - IS3 family transposase, at 472,784 to 473,671 tnp-IS3 Position (kb) 472 473Strain fitness (log2 ratio) -1 0 1at 472.613 kb on + strand, within gp18

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Per-strain Table

Position Strand Gene LocusTag Fraction WM_Bas09
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472,613 + gp18 JDDGAC_02685 0.89 -1.4

Or see this region's nucleotide sequence