Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS21295

Experiment: R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS21285 and ABZR88_RS21290 are separated by 166 nucleotidesABZR88_RS21290 and ABZR88_RS21295 are separated by 257 nucleotidesABZR88_RS21295 and ABZR88_RS21300 are separated by 528 nucleotides ABZR88_RS21285: ABZR88_RS21285 - hypothetical protein, at 5,131,559 to 5,131,885 _RS21285 ABZR88_RS21290: ABZR88_RS21290 - cupin domain-containing protein, at 5,132,052 to 5,132,453 _RS21290 ABZR88_RS21295: ABZR88_RS21295 - hypothetical protein, at 5,132,711 to 5,132,911 _RS21295 ABZR88_RS21300: ABZR88_RS21300 - hypothetical protein, at 5,133,440 to 5,134,081 _RS21300 Position (kb) 5132 5133Strain fitness (log2 ratio) -1 0 1at 5131.970 kb on + strandat 5132.011 kb on + strandat 5132.098 kb on + strand, within ABZR88_RS21290at 5132.384 kb on + strand, within ABZR88_RS21290at 5132.404 kb on + strand, within ABZR88_RS21290at 5132.574 kb on + strandat 5132.574 kb on + strandat 5132.656 kb on + strandat 5132.661 kb on - strandat 5132.697 kb on - strandat 5132.842 kb on - strand, within ABZR88_RS21295at 5132.877 kb on - strand, within ABZR88_RS21295at 5133.023 kb on - strandat 5133.043 kb on - strandat 5133.171 kb on + strandat 5133.271 kb on + strandat 5133.350 kb on - strandat 5133.382 kb on - strandat 5133.655 kb on + strand, within ABZR88_RS21300at 5133.656 kb on - strand, within ABZR88_RS21300

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
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5,131,970 + -0.8
5,132,011 + +0.1
5,132,098 + ABZR88_RS21290 0.11 +0.3
5,132,384 + ABZR88_RS21290 0.83 -0.8
5,132,404 + ABZR88_RS21290 0.88 +0.1
5,132,574 + -0.7
5,132,574 + +0.4
5,132,656 + +0.3
5,132,661 - +0.3
5,132,697 - +0.3
5,132,842 - ABZR88_RS21295 0.65 +0.5
5,132,877 - ABZR88_RS21295 0.83 +0.0
5,133,023 - +1.5
5,133,043 - +0.3
5,133,171 + -0.8
5,133,271 + +1.1
5,133,350 - +1.3
5,133,382 - -0.1
5,133,655 + ABZR88_RS21300 0.33 +1.5
5,133,656 - ABZR88_RS21300 0.34 -0.8

Or see this region's nucleotide sequence