Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS16170

Experiment: R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS16165 and ABZR88_RS16170 are separated by 150 nucleotidesABZR88_RS16170 and ABZR88_RS16175 are separated by 113 nucleotides ABZR88_RS16165: ABZR88_RS16165 - aldose epimerase family protein, at 3,980,852 to 3,981,856 _RS16165 ABZR88_RS16170: ABZR88_RS16170 - hypothetical protein, at 3,982,007 to 3,982,195 _RS16170 ABZR88_RS16175: ABZR88_RS16175 - hypothetical protein, at 3,982,309 to 3,983,217 _RS16175 Position (kb) 3982 3983Strain fitness (log2 ratio) -1 0 1 2at 3981.184 kb on - strand, within ABZR88_RS16165at 3981.335 kb on + strand, within ABZR88_RS16165at 3981.386 kb on + strand, within ABZR88_RS16165at 3981.430 kb on - strand, within ABZR88_RS16165at 3981.503 kb on - strand, within ABZR88_RS16165at 3981.551 kb on - strand, within ABZR88_RS16165at 3981.666 kb on - strand, within ABZR88_RS16165at 3981.864 kb on + strandat 3982.041 kb on - strand, within ABZR88_RS16170at 3982.137 kb on + strand, within ABZR88_RS16170at 3982.220 kb on - strandat 3982.275 kb on + strandat 3982.337 kb on + strandat 3982.377 kb on + strandat 3982.379 kb on - strandat 3982.420 kb on - strand, within ABZR88_RS16175at 3982.490 kb on - strand, within ABZR88_RS16175at 3982.512 kb on + strand, within ABZR88_RS16175at 3982.652 kb on - strand, within ABZR88_RS16175at 3982.697 kb on - strand, within ABZR88_RS16175at 3982.821 kb on - strand, within ABZR88_RS16175at 3982.871 kb on + strand, within ABZR88_RS16175at 3982.881 kb on + strand, within ABZR88_RS16175at 3982.885 kb on - strand, within ABZR88_RS16175at 3982.911 kb on + strand, within ABZR88_RS16175at 3982.911 kb on + strand, within ABZR88_RS16175at 3983.036 kb on - strand, within ABZR88_RS16175at 3983.105 kb on - strand, within ABZR88_RS16175at 3983.105 kb on - strand, within ABZR88_RS16175at 3983.162 kb on - strandat 3983.195 kb on - strandat 3983.195 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
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3,981,184 - ABZR88_RS16165 0.33 -0.3
3,981,335 + ABZR88_RS16165 0.48 -0.2
3,981,386 + ABZR88_RS16165 0.53 +0.3
3,981,430 - ABZR88_RS16165 0.58 -1.5
3,981,503 - ABZR88_RS16165 0.65 +0.3
3,981,551 - ABZR88_RS16165 0.70 +0.4
3,981,666 - ABZR88_RS16165 0.81 -0.8
3,981,864 + +0.1
3,982,041 - ABZR88_RS16170 0.18 -0.5
3,982,137 + ABZR88_RS16170 0.69 +0.2
3,982,220 - +1.5
3,982,275 + +0.1
3,982,337 + -0.6
3,982,377 + +1.9
3,982,379 - -0.3
3,982,420 - ABZR88_RS16175 0.12 +1.5
3,982,490 - ABZR88_RS16175 0.20 +0.2
3,982,512 + ABZR88_RS16175 0.22 -1.3
3,982,652 - ABZR88_RS16175 0.38 -0.9
3,982,697 - ABZR88_RS16175 0.43 +1.0
3,982,821 - ABZR88_RS16175 0.56 +0.6
3,982,871 + ABZR88_RS16175 0.62 +1.9
3,982,881 + ABZR88_RS16175 0.63 -0.3
3,982,885 - ABZR88_RS16175 0.63 -0.1
3,982,911 + ABZR88_RS16175 0.66 -0.9
3,982,911 + ABZR88_RS16175 0.66 +1.9
3,983,036 - ABZR88_RS16175 0.80 +0.9
3,983,105 - ABZR88_RS16175 0.88 +0.6
3,983,105 - ABZR88_RS16175 0.88 -0.4
3,983,162 - -0.9
3,983,195 - -0.1
3,983,195 - -0.4

Or see this region's nucleotide sequence