Experiment: R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS16165 and ABZR88_RS16170 are separated by 150 nucleotides ABZR88_RS16170 and ABZR88_RS16175 are separated by 113 nucleotides
ABZR88_RS16165: ABZR88_RS16165 - aldose epimerase family protein, at 3,980,852 to 3,981,856
_RS16165
ABZR88_RS16170: ABZR88_RS16170 - hypothetical protein, at 3,982,007 to 3,982,195
_RS16170
ABZR88_RS16175: ABZR88_RS16175 - hypothetical protein, at 3,982,309 to 3,983,217
_RS16175
Position (kb)
3982
3983 Strain fitness (log2 ratio)
-1
0
1
2 at 3981.184 kb on - strand, within ABZR88_RS16165 at 3981.335 kb on + strand, within ABZR88_RS16165 at 3981.386 kb on + strand, within ABZR88_RS16165 at 3981.430 kb on - strand, within ABZR88_RS16165 at 3981.503 kb on - strand, within ABZR88_RS16165 at 3981.551 kb on - strand, within ABZR88_RS16165 at 3981.666 kb on - strand, within ABZR88_RS16165 at 3981.864 kb on + strand at 3982.041 kb on - strand, within ABZR88_RS16170 at 3982.137 kb on + strand, within ABZR88_RS16170 at 3982.220 kb on - strand at 3982.275 kb on + strand at 3982.337 kb on + strand at 3982.377 kb on + strand at 3982.379 kb on - strand at 3982.420 kb on - strand, within ABZR88_RS16175 at 3982.490 kb on - strand, within ABZR88_RS16175 at 3982.512 kb on + strand, within ABZR88_RS16175 at 3982.652 kb on - strand, within ABZR88_RS16175 at 3982.697 kb on - strand, within ABZR88_RS16175 at 3982.821 kb on - strand, within ABZR88_RS16175 at 3982.871 kb on + strand, within ABZR88_RS16175 at 3982.881 kb on + strand, within ABZR88_RS16175 at 3982.885 kb on - strand, within ABZR88_RS16175 at 3982.911 kb on + strand, within ABZR88_RS16175 at 3982.911 kb on + strand, within ABZR88_RS16175 at 3983.036 kb on - strand, within ABZR88_RS16175 at 3983.105 kb on - strand, within ABZR88_RS16175 at 3983.105 kb on - strand, within ABZR88_RS16175 at 3983.162 kb on - strand at 3983.195 kb on - strand at 3983.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM remove 3,981,184 - ABZR88_RS16165 0.33 -0.3 3,981,335 + ABZR88_RS16165 0.48 -0.2 3,981,386 + ABZR88_RS16165 0.53 +0.3 3,981,430 - ABZR88_RS16165 0.58 -1.5 3,981,503 - ABZR88_RS16165 0.65 +0.3 3,981,551 - ABZR88_RS16165 0.70 +0.4 3,981,666 - ABZR88_RS16165 0.81 -0.8 3,981,864 + +0.1 3,982,041 - ABZR88_RS16170 0.18 -0.5 3,982,137 + ABZR88_RS16170 0.69 +0.2 3,982,220 - +1.5 3,982,275 + +0.1 3,982,337 + -0.6 3,982,377 + +1.9 3,982,379 - -0.3 3,982,420 - ABZR88_RS16175 0.12 +1.5 3,982,490 - ABZR88_RS16175 0.20 +0.2 3,982,512 + ABZR88_RS16175 0.22 -1.3 3,982,652 - ABZR88_RS16175 0.38 -0.9 3,982,697 - ABZR88_RS16175 0.43 +1.0 3,982,821 - ABZR88_RS16175 0.56 +0.6 3,982,871 + ABZR88_RS16175 0.62 +1.9 3,982,881 + ABZR88_RS16175 0.63 -0.3 3,982,885 - ABZR88_RS16175 0.63 -0.1 3,982,911 + ABZR88_RS16175 0.66 -0.9 3,982,911 + ABZR88_RS16175 0.66 +1.9 3,983,036 - ABZR88_RS16175 0.80 +0.9 3,983,105 - ABZR88_RS16175 0.88 +0.6 3,983,105 - ABZR88_RS16175 0.88 -0.4 3,983,162 - -0.9 3,983,195 - -0.1 3,983,195 - -0.4
Or see this region's nucleotide sequence