Experiment: R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS03160 and ABZR88_RS03165 are separated by 86 nucleotides ABZR88_RS03165 and ABZR88_RS03170 are separated by 132 nucleotides ABZR88_RS03170 and ABZR88_RS03175 are separated by 0 nucleotides ABZR88_RS03175 and ABZR88_RS03180 overlap by 4 nucleotides
ABZR88_RS03160: ABZR88_RS03160 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 761,642 to 763,804
_RS03160
ABZR88_RS03165: ABZR88_RS03165 - hypothetical protein, at 763,891 to 764,088
_RS03165
ABZR88_RS03170: ABZR88_RS03170 - glycoside hydrolase family 88 protein, at 764,221 to 765,426
_RS03170
ABZR88_RS03175: ABZR88_RS03175 - family 43 glycosylhydrolase, at 765,427 to 766,377
_RS03175
ABZR88_RS03180: ABZR88_RS03180 - DUF2264 domain-containing protein, at 766,374 to 767,606
_RS03180
Position (kb) 764
765
766 Strain fitness (log2 ratio) -2
-1
0
1 at 763.353 kb on + strand, within ABZR88_RS03160 at 763.353 kb on + strand, within ABZR88_RS03160 at 763.788 kb on - strand at 763.821 kb on - strand at 764.044 kb on - strand, within ABZR88_RS03165 at 764.087 kb on - strand at 764.127 kb on + strand at 764.127 kb on + strand at 764.185 kb on + strand at 764.489 kb on - strand, within ABZR88_RS03170 at 764.602 kb on + strand, within ABZR88_RS03170 at 764.603 kb on - strand, within ABZR88_RS03170 at 764.631 kb on - strand, within ABZR88_RS03170 at 764.761 kb on - strand, within ABZR88_RS03170 at 764.823 kb on + strand, within ABZR88_RS03170 at 764.879 kb on - strand, within ABZR88_RS03170 at 764.880 kb on + strand, within ABZR88_RS03170 at 764.937 kb on + strand, within ABZR88_RS03170 at 765.001 kb on + strand, within ABZR88_RS03170 at 765.001 kb on + strand, within ABZR88_RS03170 at 765.001 kb on + strand, within ABZR88_RS03170 at 765.100 kb on - strand, within ABZR88_RS03170 at 765.104 kb on + strand, within ABZR88_RS03170 at 765.104 kb on + strand, within ABZR88_RS03170 at 765.105 kb on - strand, within ABZR88_RS03170 at 765.132 kb on + strand, within ABZR88_RS03170 at 765.198 kb on + strand, within ABZR88_RS03170 at 765.321 kb on + strand at 765.366 kb on - strand at 765.755 kb on - strand, within ABZR88_RS03175 at 765.986 kb on + strand, within ABZR88_RS03175 at 766.108 kb on - strand, within ABZR88_RS03175 at 766.218 kb on + strand, within ABZR88_RS03175 at 766.324 kb on - strand at 766.324 kb on - strand at 766.384 kb on + strand at 766.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM remove 763,353 + ABZR88_RS03160 0.79 -0.7 763,353 + ABZR88_RS03160 0.79 -0.4 763,788 - +0.3 763,821 - +0.8 764,044 - ABZR88_RS03165 0.77 +0.8 764,087 - +0.3 764,127 + -1.9 764,127 + -0.6 764,185 + +0.1 764,489 - ABZR88_RS03170 0.22 +1.2 764,602 + ABZR88_RS03170 0.32 +0.0 764,603 - ABZR88_RS03170 0.32 -0.2 764,631 - ABZR88_RS03170 0.34 +0.2 764,761 - ABZR88_RS03170 0.45 -0.4 764,823 + ABZR88_RS03170 0.50 -0.6 764,879 - ABZR88_RS03170 0.55 +1.0 764,880 + ABZR88_RS03170 0.55 +0.0 764,937 + ABZR88_RS03170 0.59 +0.6 765,001 + ABZR88_RS03170 0.65 +0.1 765,001 + ABZR88_RS03170 0.65 -2.1 765,001 + ABZR88_RS03170 0.65 -0.4 765,100 - ABZR88_RS03170 0.73 +0.1 765,104 + ABZR88_RS03170 0.73 -0.1 765,104 + ABZR88_RS03170 0.73 +1.2 765,105 - ABZR88_RS03170 0.73 +0.1 765,132 + ABZR88_RS03170 0.76 +1.3 765,198 + ABZR88_RS03170 0.81 -0.0 765,321 + +0.1 765,366 - +0.1 765,755 - ABZR88_RS03175 0.34 -0.8 765,986 + ABZR88_RS03175 0.59 +0.0 766,108 - ABZR88_RS03175 0.72 +0.2 766,218 + ABZR88_RS03175 0.83 -1.2 766,324 - -0.7 766,324 - -0.3 766,384 + -1.4 766,397 - -0.0
Or see this region's nucleotide sequence