Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS16740

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS16735 and ABZR88_RS16740 are separated by 611 nucleotidesABZR88_RS16740 and ABZR88_RS16745 are separated by 188 nucleotides ABZR88_RS16735: ABZR88_RS16735 - DinB family protein, at 4,103,378 to 4,103,893 _RS16735 ABZR88_RS16740: ABZR88_RS16740 - recombinase RecA, at 4,104,505 to 4,105,512 _RS16740 ABZR88_RS16745: ABZR88_RS16745 - hypothetical protein, at 4,105,701 to 4,106,957 _RS16745 Position (kb) 4104 4105 4106Strain fitness (log2 ratio) -2 -1 0 1at 4103.718 kb on - strand, within ABZR88_RS16735at 4103.947 kb on + strandat 4104.104 kb on + strandat 4104.391 kb on - strandat 4104.391 kb on - strandat 4104.489 kb on - strandat 4104.526 kb on - strandat 4104.541 kb on - strandat 4104.698 kb on - strand, within ABZR88_RS16740at 4104.915 kb on + strand, within ABZR88_RS16740at 4105.071 kb on + strand, within ABZR88_RS16740at 4105.531 kb on - strandat 4105.551 kb on - strandat 4105.553 kb on - strandat 4105.670 kb on - strandat 4105.672 kb on - strandat 4105.673 kb on + strandat 4105.690 kb on + strandat 4105.692 kb on + strandat 4105.764 kb on - strandat 4105.895 kb on - strand, within ABZR88_RS16745at 4105.983 kb on + strand, within ABZR88_RS16745at 4105.984 kb on - strand, within ABZR88_RS16745at 4106.045 kb on + strand, within ABZR88_RS16745at 4106.130 kb on + strand, within ABZR88_RS16745at 4106.142 kb on - strand, within ABZR88_RS16745at 4106.224 kb on - strand, within ABZR88_RS16745at 4106.249 kb on + strand, within ABZR88_RS16745at 4106.364 kb on - strand, within ABZR88_RS16745at 4106.434 kb on + strand, within ABZR88_RS16745at 4106.484 kb on - strand, within ABZR88_RS16745at 4106.487 kb on + strand, within ABZR88_RS16745at 4106.488 kb on - strand, within ABZR88_RS16745

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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4,103,718 - ABZR88_RS16735 0.66 -1.8
4,103,947 + -1.4
4,104,104 + +1.1
4,104,391 - -1.2
4,104,391 - +1.1
4,104,489 - -0.6
4,104,526 - -1.0
4,104,541 - +0.4
4,104,698 - ABZR88_RS16740 0.19 -1.2
4,104,915 + ABZR88_RS16740 0.41 -0.9
4,105,071 + ABZR88_RS16740 0.56 -0.7
4,105,531 - -1.6
4,105,551 - -0.4
4,105,553 - +0.3
4,105,670 - -0.0
4,105,672 - -0.4
4,105,673 + -0.5
4,105,690 + +0.3
4,105,692 + +0.1
4,105,764 - -0.1
4,105,895 - ABZR88_RS16745 0.15 +0.1
4,105,983 + ABZR88_RS16745 0.22 +0.9
4,105,984 - ABZR88_RS16745 0.23 -1.0
4,106,045 + ABZR88_RS16745 0.27 +1.4
4,106,130 + ABZR88_RS16745 0.34 -1.6
4,106,142 - ABZR88_RS16745 0.35 +0.1
4,106,224 - ABZR88_RS16745 0.42 -1.7
4,106,249 + ABZR88_RS16745 0.44 +0.0
4,106,364 - ABZR88_RS16745 0.53 +1.4
4,106,434 + ABZR88_RS16745 0.58 -1.0
4,106,484 - ABZR88_RS16745 0.62 +0.2
4,106,487 + ABZR88_RS16745 0.63 +0.4
4,106,488 - ABZR88_RS16745 0.63 -2.1

Or see this region's nucleotide sequence