Experiment: R2A no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS03785 and ABZR88_RS03790 are separated by 1 nucleotides ABZR88_RS03790 and ABZR88_RS03795 are separated by 127 nucleotides ABZR88_RS03795 and ABZR88_RS03800 are separated by 3 nucleotides ABZR88_RS03800 and ABZR88_RS03805 are separated by 4 nucleotides
ABZR88_RS03785: ABZR88_RS03785 - DUF2851 family protein, at 900,942 to 902,228
_RS03785
ABZR88_RS03790: ABZR88_RS03790 - PspC domain-containing protein, at 902,230 to 902,451
_RS03790
ABZR88_RS03795: ABZR88_RS03795 - hypothetical protein, at 902,579 to 902,788
_RS03795
ABZR88_RS03800: ABZR88_RS03800 - RES family NAD+ phosphorylase, at 902,792 to 903,250
_RS03800
ABZR88_RS03805: ABZR88_RS03805 - antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein, at 903,255 to 903,749
_RS03805
Position (kb) 902
903 Strain fitness (log2 ratio) -2
-1
0
1 at 901.683 kb on - strand, within ABZR88_RS03785 at 901.979 kb on + strand, within ABZR88_RS03785 at 902.102 kb on + strand at 902.166 kb on + strand at 902.166 kb on + strand at 902.207 kb on + strand at 902.277 kb on - strand, within ABZR88_RS03790 at 902.305 kb on - strand, within ABZR88_RS03790 at 902.310 kb on + strand, within ABZR88_RS03790 at 902.311 kb on - strand, within ABZR88_RS03790 at 902.335 kb on - strand, within ABZR88_RS03790 at 902.414 kb on - strand, within ABZR88_RS03790 at 902.552 kb on + strand at 902.716 kb on + strand, within ABZR88_RS03795 at 902.780 kb on - strand at 902.844 kb on - strand, within ABZR88_RS03800 at 902.871 kb on - strand, within ABZR88_RS03800 at 902.891 kb on - strand, within ABZR88_RS03800 at 902.891 kb on - strand, within ABZR88_RS03800 at 903.117 kb on - strand, within ABZR88_RS03800 at 903.122 kb on + strand, within ABZR88_RS03800
Per-strain Table
Position Strand Gene LocusTag Fraction R2A no stress control remove 901,683 - ABZR88_RS03785 0.58 +1.1 901,979 + ABZR88_RS03785 0.81 -1.9 902,102 + -1.3 902,166 + -1.1 902,166 + -0.7 902,207 + -0.4 902,277 - ABZR88_RS03790 0.21 -0.9 902,305 - ABZR88_RS03790 0.34 -1.2 902,310 + ABZR88_RS03790 0.36 +0.4 902,311 - ABZR88_RS03790 0.36 -0.0 902,335 - ABZR88_RS03790 0.47 +0.4 902,414 - ABZR88_RS03790 0.83 -0.9 902,552 + -0.9 902,716 + ABZR88_RS03795 0.65 -0.1 902,780 - +0.6 902,844 - ABZR88_RS03800 0.11 +0.0 902,871 - ABZR88_RS03800 0.17 +0.4 902,891 - ABZR88_RS03800 0.22 -0.8 902,891 - ABZR88_RS03800 0.22 -0.4 903,117 - ABZR88_RS03800 0.71 +1.6 903,122 + ABZR88_RS03800 0.72 -0.4
Or see this region's nucleotide sequence