Strain Fitness in Escherichia coli ECOR38 around HEPCGN_02975

Experiment: Control_ECOR38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECOR38
502,154	+				+0.1
502,155	-				+0.5
502,189	+				-0.8
502,199	+				+0.8
502,200	-				-0.4
502,226	+				+0.5
502,227	-				+0.8
502,227	-				-0.3
502,227	-				-0.3
502,245	+				-0.4
502,245	+				-0.2
502,245	+				+0.6
502,247	+				+0.5
502,350	+				+0.2
502,398	-				+0.4
502,410	-				+0.4
502,414	-				+0.1
502,414	-				-0.6
502,511	-	udk	HEPCGN_02970	0.15	+0.3
502,563	+	udk	HEPCGN_02970	0.23	-1.3
502,611	+	udk	HEPCGN_02970	0.30	+0.4
502,611	+	udk	HEPCGN_02970	0.30	-0.2
502,611	+	udk	HEPCGN_02970	0.30	+0.3
502,704	+	udk	HEPCGN_02970	0.45	-0.3
502,715	+	udk	HEPCGN_02970	0.47	-0.3
502,715	+	udk	HEPCGN_02970	0.47	+0.8
502,716	-	udk	HEPCGN_02970	0.47	-1.1
502,716	-	udk	HEPCGN_02970	0.47	-0.5
502,811	+	udk	HEPCGN_02970	0.62	+0.1
502,982	+	udk	HEPCGN_02970	0.88	-0.7
503,023	+				-0.3
503,024	-				-0.1
503,055	+				+0.2
503,073	+				-1.3
503,230	-	dcd	HEPCGN_02975	0.14	-1.5
503,392	+	dcd	HEPCGN_02975	0.42	+1.2
503,567	-	dcd	HEPCGN_02975	0.72	+1.6
503,610	-	dcd	HEPCGN_02975	0.79	+1.2
503,659	+	dcd	HEPCGN_02975	0.88	+2.7
503,728	+				+2.6
503,851	+				-0.2
503,853	+				-0.4
503,877	+				-0.7
503,877	+				-0.0
503,934	+				-0.2
503,935	-				-0.2
503,935	-				-0.9
503,935	-				+0.5
503,935	-				-0.5
504,032	+	asmA	HEPCGN_02980	0.15	-1.0
504,068	+	asmA	HEPCGN_02980	0.17	+0.2
504,189	+	asmA	HEPCGN_02980	0.24	-0.8
504,190	-	asmA	HEPCGN_02980	0.24	-0.0
504,353	+	asmA	HEPCGN_02980	0.32	-0.1
504,371	+	asmA	HEPCGN_02980	0.33	-0.8
504,460	-	asmA	HEPCGN_02980	0.38	+0.6
504,504	+	asmA	HEPCGN_02980	0.41	-1.2
504,504	+	asmA	HEPCGN_02980	0.41	-0.5
504,504	+	asmA	HEPCGN_02980	0.41	-0.3
504,549	+	asmA	HEPCGN_02980	0.43	+0.5
504,550	-	asmA	HEPCGN_02980	0.43	+0.5