Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15400 and A4249_RS15405 are separated by 159 nucleotides A4249_RS15405 and A4249_RS15410 are separated by 27 nucleotides A4249_RS15410 and A4249_RS15415 are separated by 14 nucleotides A4249_RS15415 and A4249_RS15420 are separated by 5 nucleotides A4249_RS15420 and A4249_RS15425 are separated by 0 nucleotides
A4249_RS15400: A4249_RS15400 - methionine adenosyltransferase, at 3,122,830 to 3,124,035
_RS15400
A4249_RS15405: A4249_RS15405 - helix-turn-helix transcriptional regulator, at 3,124,195 to 3,124,641
_RS15405
A4249_RS15410: A4249_RS15410 - hypothetical protein, at 3,124,669 to 3,125,007
_RS15410
A4249_RS15415: A4249_RS15415 - hypothetical protein, at 3,125,022 to 3,125,477
_RS15415
A4249_RS15420: A4249_RS15420 - hypothetical protein, at 3,125,483 to 3,125,851
_RS15420
A4249_RS15425: A4249_RS15425 - helix-turn-helix transcriptional regulator, at 3,125,852 to 3,126,205
_RS15425
Position (kb)
3124
3125
3126 Strain fitness (log2 ratio)
-1
0
1
2 at 3124.072 kb on - strand at 3124.078 kb on - strand at 3124.078 kb on - strand at 3124.105 kb on + strand at 3124.105 kb on + strand at 3124.138 kb on + strand at 3124.139 kb on - strand at 3124.144 kb on + strand at 3124.144 kb on + strand at 3124.145 kb on - strand at 3124.145 kb on - strand at 3124.145 kb on - strand at 3124.145 kb on - strand at 3124.167 kb on + strand at 3124.230 kb on + strand at 3124.230 kb on + strand at 3124.230 kb on + strand at 3124.230 kb on + strand at 3124.230 kb on + strand at 3124.231 kb on - strand at 3124.231 kb on - strand at 3124.231 kb on - strand at 3124.231 kb on - strand at 3124.231 kb on - strand at 3124.231 kb on - strand at 3124.284 kb on + strand, within A4249_RS15405 at 3124.284 kb on + strand, within A4249_RS15405 at 3124.284 kb on + strand, within A4249_RS15405 at 3124.284 kb on + strand, within A4249_RS15405 at 3124.285 kb on - strand, within A4249_RS15405 at 3124.285 kb on - strand, within A4249_RS15405 at 3124.285 kb on - strand, within A4249_RS15405 at 3124.324 kb on + strand, within A4249_RS15405 at 3124.325 kb on - strand, within A4249_RS15405 at 3124.325 kb on - strand, within A4249_RS15405 at 3124.362 kb on + strand, within A4249_RS15405 at 3124.362 kb on + strand, within A4249_RS15405 at 3124.363 kb on - strand, within A4249_RS15405 at 3124.374 kb on + strand, within A4249_RS15405 at 3124.374 kb on + strand, within A4249_RS15405 at 3124.375 kb on - strand, within A4249_RS15405 at 3124.375 kb on - strand, within A4249_RS15405 at 3124.397 kb on + strand, within A4249_RS15405 at 3124.397 kb on + strand, within A4249_RS15405 at 3124.398 kb on - strand, within A4249_RS15405 at 3124.398 kb on - strand, within A4249_RS15405 at 3124.422 kb on + strand, within A4249_RS15405 at 3124.423 kb on - strand, within A4249_RS15405 at 3124.423 kb on - strand, within A4249_RS15405 at 3124.423 kb on - strand, within A4249_RS15405 at 3124.652 kb on + strand at 3124.652 kb on + strand at 3124.652 kb on + strand at 3124.652 kb on + strand at 3124.653 kb on - strand at 3124.653 kb on - strand at 3124.653 kb on - strand at 3124.653 kb on - strand at 3124.653 kb on - strand at 3124.833 kb on + strand, within A4249_RS15410 at 3124.833 kb on + strand, within A4249_RS15410 at 3124.834 kb on - strand, within A4249_RS15410 at 3124.834 kb on - strand, within A4249_RS15410 at 3124.834 kb on - strand, within A4249_RS15410 at 3124.834 kb on - strand, within A4249_RS15410 at 3124.834 kb on - strand, within A4249_RS15410 at 3124.848 kb on - strand, within A4249_RS15410 at 3124.870 kb on - strand, within A4249_RS15410 at 3125.061 kb on + strand at 3125.062 kb on - strand at 3125.135 kb on + strand, within A4249_RS15415 at 3125.136 kb on - strand, within A4249_RS15415 at 3125.136 kb on - strand, within A4249_RS15415 at 3125.136 kb on - strand, within A4249_RS15415 at 3125.245 kb on - strand, within A4249_RS15415 at 3125.347 kb on + strand, within A4249_RS15415 at 3125.347 kb on + strand, within A4249_RS15415 at 3125.424 kb on + strand, within A4249_RS15415 at 3125.488 kb on + strand at 3125.488 kb on + strand at 3125.488 kb on + strand at 3125.489 kb on - strand at 3125.489 kb on - strand at 3125.563 kb on - strand, within A4249_RS15420 at 3125.563 kb on - strand, within A4249_RS15420 at 3125.563 kb on - strand, within A4249_RS15420
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 3,124,072 - +0.9 3,124,078 - +1.3 3,124,078 - -0.7 3,124,105 + -0.1 3,124,105 + -1.1 3,124,138 + -0.1 3,124,139 - -0.7 3,124,144 + -0.9 3,124,144 + -0.7 3,124,145 - -0.7 3,124,145 - -0.2 3,124,145 - -0.7 3,124,145 - -0.4 3,124,167 + -0.3 3,124,230 + -0.6 3,124,230 + +0.8 3,124,230 + +0.4 3,124,230 + -1.0 3,124,230 + +1.3 3,124,231 - -0.9 3,124,231 - -0.2 3,124,231 - -0.2 3,124,231 - -0.0 3,124,231 - +0.1 3,124,231 - -0.5 3,124,284 + A4249_RS15405 0.20 -0.3 3,124,284 + A4249_RS15405 0.20 +0.0 3,124,284 + A4249_RS15405 0.20 -0.1 3,124,284 + A4249_RS15405 0.20 +0.2 3,124,285 - A4249_RS15405 0.20 +1.1 3,124,285 - A4249_RS15405 0.20 -0.2 3,124,285 - A4249_RS15405 0.20 +0.0 3,124,324 + A4249_RS15405 0.29 +0.5 3,124,325 - A4249_RS15405 0.29 +1.2 3,124,325 - A4249_RS15405 0.29 -0.0 3,124,362 + A4249_RS15405 0.37 -0.1 3,124,362 + A4249_RS15405 0.37 +1.5 3,124,363 - A4249_RS15405 0.38 -0.4 3,124,374 + A4249_RS15405 0.40 +0.2 3,124,374 + A4249_RS15405 0.40 -0.5 3,124,375 - A4249_RS15405 0.40 -1.0 3,124,375 - A4249_RS15405 0.40 -0.9 3,124,397 + A4249_RS15405 0.45 -0.7 3,124,397 + A4249_RS15405 0.45 -0.4 3,124,398 - A4249_RS15405 0.45 +0.6 3,124,398 - A4249_RS15405 0.45 -0.7 3,124,422 + A4249_RS15405 0.51 -0.4 3,124,423 - A4249_RS15405 0.51 +1.1 3,124,423 - A4249_RS15405 0.51 -0.5 3,124,423 - A4249_RS15405 0.51 -0.4 3,124,652 + +0.5 3,124,652 + -0.5 3,124,652 + +0.8 3,124,652 + +0.0 3,124,653 - +0.2 3,124,653 - +0.6 3,124,653 - -1.6 3,124,653 - -0.3 3,124,653 - -0.9 3,124,833 + A4249_RS15410 0.48 +1.0 3,124,833 + A4249_RS15410 0.48 -0.1 3,124,834 - A4249_RS15410 0.49 +1.3 3,124,834 - A4249_RS15410 0.49 -0.3 3,124,834 - A4249_RS15410 0.49 +0.7 3,124,834 - A4249_RS15410 0.49 +1.8 3,124,834 - A4249_RS15410 0.49 +0.4 3,124,848 - A4249_RS15410 0.53 +0.0 3,124,870 - A4249_RS15410 0.59 +0.3 3,125,061 + +0.9 3,125,062 - -0.1 3,125,135 + A4249_RS15415 0.25 +0.5 3,125,136 - A4249_RS15415 0.25 +1.8 3,125,136 - A4249_RS15415 0.25 +1.3 3,125,136 - A4249_RS15415 0.25 +0.3 3,125,245 - A4249_RS15415 0.49 -0.3 3,125,347 + A4249_RS15415 0.71 +0.1 3,125,347 + A4249_RS15415 0.71 +0.0 3,125,424 + A4249_RS15415 0.88 -0.3 3,125,488 + -0.9 3,125,488 + -0.0 3,125,488 + +1.3 3,125,489 - +0.0 3,125,489 - -1.0 3,125,563 - A4249_RS15420 0.22 +1.5 3,125,563 - A4249_RS15420 0.22 -0.9 3,125,563 - A4249_RS15420 0.22 +1.1
Or see this region's nucleotide sequence