Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14075

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14070 and A4249_RS14075 are separated by 73 nucleotidesA4249_RS14075 and A4249_RS14080 are separated by 115 nucleotidesA4249_RS14080 and A4249_RS14085 overlap by 14 nucleotides A4249_RS14070: A4249_RS14070 - response regulator, at 2,838,191 to 2,839,729 _RS14070 A4249_RS14075: A4249_RS14075 - ATP-binding protein, at 2,839,803 to 2,840,576 _RS14075 A4249_RS14080: A4249_RS14080 - TnsA endonuclease N-terminal domain-containing protein, at 2,840,692 to 2,841,402 _RS14080 A4249_RS14085: A4249_RS14085 - Mu transposase C-terminal domain-containing protein, at 2,841,389 to 2,843,296 _RS14085 Position (kb) 2839 2840 2841Strain fitness (log2 ratio) -2 -1 0 1 2at 2838.854 kb on - strand, within A4249_RS14070at 2839.166 kb on - strand, within A4249_RS14070at 2839.166 kb on - strand, within A4249_RS14070at 2839.166 kb on - strand, within A4249_RS14070at 2839.485 kb on - strand, within A4249_RS14070at 2839.494 kb on + strand, within A4249_RS14070at 2839.495 kb on - strand, within A4249_RS14070at 2839.557 kb on + strand, within A4249_RS14070at 2839.557 kb on + strand, within A4249_RS14070at 2839.558 kb on - strand, within A4249_RS14070at 2839.558 kb on - strand, within A4249_RS14070at 2839.756 kb on + strandat 2839.756 kb on + strandat 2839.757 kb on - strandat 2839.757 kb on - strandat 2839.770 kb on + strandat 2839.770 kb on + strandat 2839.771 kb on - strandat 2840.312 kb on - strand, within A4249_RS14075at 2840.500 kb on + strandat 2840.500 kb on + strandat 2840.500 kb on + strandat 2840.501 kb on - strandat 2840.501 kb on - strandat 2840.501 kb on - strandat 2840.501 kb on - strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.579 kb on + strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.580 kb on - strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.581 kb on + strandat 2840.582 kb on - strandat 2840.582 kb on - strandat 2840.582 kb on - strandat 2840.582 kb on - strandat 2840.582 kb on - strandat 2840.582 kb on - strandat 2840.752 kb on - strandat 2840.822 kb on + strand, within A4249_RS14080at 2840.911 kb on + strand, within A4249_RS14080at 2840.911 kb on + strand, within A4249_RS14080at 2840.911 kb on + strand, within A4249_RS14080at 2840.912 kb on - strand, within A4249_RS14080at 2840.912 kb on - strand, within A4249_RS14080at 2840.975 kb on + strand, within A4249_RS14080at 2840.975 kb on + strand, within A4249_RS14080at 2840.976 kb on - strand, within A4249_RS14080at 2841.013 kb on - strand, within A4249_RS14080at 2841.037 kb on + strand, within A4249_RS14080at 2841.037 kb on + strand, within A4249_RS14080at 2841.038 kb on - strand, within A4249_RS14080at 2841.038 kb on - strand, within A4249_RS14080at 2841.120 kb on - strand, within A4249_RS14080at 2841.147 kb on - strand, within A4249_RS14080at 2841.213 kb on + strand, within A4249_RS14080at 2841.286 kb on + strand, within A4249_RS14080at 2841.286 kb on + strand, within A4249_RS14080at 2841.286 kb on + strand, within A4249_RS14080at 2841.286 kb on + strand, within A4249_RS14080at 2841.286 kb on + strand, within A4249_RS14080at 2841.287 kb on - strand, within A4249_RS14080at 2841.333 kb on + strandat 2841.333 kb on + strandat 2841.334 kb on - strandat 2841.334 kb on - strandat 2841.334 kb on - strandat 2841.400 kb on + strandat 2841.400 kb on + strandat 2841.401 kb on - strandat 2841.401 kb on - strandat 2841.401 kb on - strandat 2841.401 kb on - strandat 2841.476 kb on + strandat 2841.476 kb on + strandat 2841.476 kb on + strandat 2841.477 kb on - strandat 2841.477 kb on - strandat 2841.477 kb on - strandat 2841.477 kb on - strandat 2841.477 kb on - strandat 2841.477 kb on - strandat 2841.566 kb on + strandat 2841.566 kb on + strandat 2841.566 kb on + strandat 2841.566 kb on + strandat 2841.566 kb on + strandat 2841.566 kb on + strandat 2841.567 kb on - strandat 2841.567 kb on - strandat 2841.575 kb on + strandat 2841.575 kb on + strandat 2841.575 kb on + strandat 2841.575 kb on + strandat 2841.575 kb on + strandat 2841.575 kb on + strandat 2841.576 kb on - strandat 2841.576 kb on - strandat 2841.576 kb on - strandat 2841.576 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,838,854 - A4249_RS14070 0.43 +0.4
2,839,166 - A4249_RS14070 0.63 +0.2
2,839,166 - A4249_RS14070 0.63 -0.2
2,839,166 - A4249_RS14070 0.63 +0.1
2,839,485 - A4249_RS14070 0.84 +0.7
2,839,494 + A4249_RS14070 0.85 -0.2
2,839,495 - A4249_RS14070 0.85 -0.8
2,839,557 + A4249_RS14070 0.89 +0.3
2,839,557 + A4249_RS14070 0.89 -0.4
2,839,558 - A4249_RS14070 0.89 -0.3
2,839,558 - A4249_RS14070 0.89 +0.6
2,839,756 + -0.2
2,839,756 + +0.0
2,839,757 - +0.4
2,839,757 - +0.8
2,839,770 + -1.1
2,839,770 + -0.0
2,839,771 - +0.4
2,840,312 - A4249_RS14075 0.66 +1.5
2,840,500 + +0.4
2,840,500 + -0.4
2,840,500 + +1.2
2,840,501 - +1.3
2,840,501 - +0.6
2,840,501 - -0.0
2,840,501 - +0.1
2,840,579 + -1.3
2,840,579 + +0.1
2,840,579 + +1.1
2,840,579 + +1.7
2,840,579 + +0.0
2,840,579 + +1.7
2,840,579 + -1.0
2,840,579 + +2.1
2,840,579 + +0.1
2,840,580 - -1.7
2,840,580 - -1.0
2,840,580 - -0.4
2,840,580 - -1.6
2,840,580 - +0.2
2,840,580 - -0.5
2,840,580 - -0.3
2,840,580 - -1.4
2,840,580 - +0.2
2,840,580 - +0.0
2,840,580 - -1.1
2,840,580 - -1.0
2,840,581 + -1.7
2,840,581 + -0.0
2,840,581 + -0.4
2,840,581 + +0.2
2,840,581 + +0.0
2,840,581 + +0.4
2,840,581 + +0.6
2,840,581 + +0.0
2,840,582 - +1.1
2,840,582 - +2.2
2,840,582 - -1.3
2,840,582 - +0.7
2,840,582 - -0.1
2,840,582 - +0.6
2,840,752 - +0.0
2,840,822 + A4249_RS14080 0.18 -0.6
2,840,911 + A4249_RS14080 0.31 +1.9
2,840,911 + A4249_RS14080 0.31 +1.4
2,840,911 + A4249_RS14080 0.31 +1.2
2,840,912 - A4249_RS14080 0.31 -1.1
2,840,912 - A4249_RS14080 0.31 +0.2
2,840,975 + A4249_RS14080 0.40 -0.0
2,840,975 + A4249_RS14080 0.40 +0.1
2,840,976 - A4249_RS14080 0.40 -0.1
2,841,013 - A4249_RS14080 0.45 +0.8
2,841,037 + A4249_RS14080 0.49 -0.1
2,841,037 + A4249_RS14080 0.49 -0.9
2,841,038 - A4249_RS14080 0.49 -0.4
2,841,038 - A4249_RS14080 0.49 +1.4
2,841,120 - A4249_RS14080 0.60 +0.3
2,841,147 - A4249_RS14080 0.64 +2.0
2,841,213 + A4249_RS14080 0.73 -0.1
2,841,286 + A4249_RS14080 0.84 +0.1
2,841,286 + A4249_RS14080 0.84 +0.7
2,841,286 + A4249_RS14080 0.84 -0.5
2,841,286 + A4249_RS14080 0.84 +0.3
2,841,286 + A4249_RS14080 0.84 -2.3
2,841,287 - A4249_RS14080 0.84 -0.0
2,841,333 + -0.0
2,841,333 + +0.2
2,841,334 - -0.3
2,841,334 - +0.5
2,841,334 - -1.3
2,841,400 + -0.3
2,841,400 + -0.6
2,841,401 - +0.6
2,841,401 - +0.8
2,841,401 - -0.7
2,841,401 - +1.7
2,841,476 + -2.2
2,841,476 + -1.1
2,841,476 + -0.2
2,841,477 - -0.2
2,841,477 - +0.3
2,841,477 - -1.0
2,841,477 - +0.3
2,841,477 - +0.2
2,841,477 - -1.0
2,841,566 + -0.1
2,841,566 + -0.5
2,841,566 + -0.2
2,841,566 + -1.0
2,841,566 + -0.5
2,841,566 + +0.5
2,841,567 - +1.4
2,841,567 - +0.9
2,841,575 + -1.2
2,841,575 + -0.3
2,841,575 + -0.0
2,841,575 + -0.3
2,841,575 + -1.5
2,841,575 + +0.7
2,841,576 - -0.9
2,841,576 - -0.1
2,841,576 - +0.0
2,841,576 - +0.6

Or see this region's nucleotide sequence