Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12855 and A4249_RS12860 are separated by 12 nucleotides A4249_RS12860 and A4249_RS12865 are separated by 111 nucleotides A4249_RS12865 and A4249_RS12870 are separated by 81 nucleotides A4249_RS12870 and A4249_RS12875 are separated by 173 nucleotides
A4249_RS12855: A4249_RS12855 - serine protease, at 2,580,917 to 2,581,750
_RS12855
A4249_RS12860: A4249_RS12860 - DUF350 domain-containing protein, at 2,581,763 to 2,582,203
_RS12860
A4249_RS12865: A4249_RS12865 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 2,582,315 to 2,583,475
_RS12865
A4249_RS12870: A4249_RS12870 - DUF6356 family protein, at 2,583,557 to 2,583,856
_RS12870
A4249_RS12875: A4249_RS12875 - trypsin-like peptidase domain-containing protein, at 2,584,030 to 2,585,361
_RS12875
Position (kb)
2582
2583
2584 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.608 kb on - strand, within A4249_RS12855 at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.716 kb on + strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.717 kb on - strand at 2581.807 kb on + strand, within A4249_RS12860 at 2582.079 kb on + strand, within A4249_RS12860 at 2582.079 kb on + strand, within A4249_RS12860 at 2582.080 kb on - strand, within A4249_RS12860 at 2582.080 kb on - strand, within A4249_RS12860 at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.269 kb on + strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.270 kb on - strand at 2582.338 kb on + strand at 2582.338 kb on + strand at 2582.339 kb on - strand at 2582.436 kb on + strand, within A4249_RS12865 at 2582.437 kb on - strand, within A4249_RS12865 at 2582.497 kb on - strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.616 kb on + strand, within A4249_RS12865 at 2582.617 kb on - strand, within A4249_RS12865 at 2582.617 kb on - strand, within A4249_RS12865 at 2582.617 kb on - strand, within A4249_RS12865 at 2582.655 kb on + strand, within A4249_RS12865 at 2582.656 kb on - strand, within A4249_RS12865 at 2582.691 kb on + strand, within A4249_RS12865 at 2582.691 kb on + strand, within A4249_RS12865 at 2582.692 kb on - strand, within A4249_RS12865 at 2582.898 kb on + strand, within A4249_RS12865 at 2582.898 kb on + strand, within A4249_RS12865 at 2582.898 kb on + strand, within A4249_RS12865 at 2582.899 kb on - strand, within A4249_RS12865 at 2582.899 kb on - strand, within A4249_RS12865 at 2583.127 kb on + strand, within A4249_RS12865 at 2583.127 kb on + strand, within A4249_RS12865 at 2583.127 kb on + strand, within A4249_RS12865 at 2583.127 kb on + strand, within A4249_RS12865 at 2583.127 kb on + strand, within A4249_RS12865 at 2583.128 kb on - strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.129 kb on + strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.130 kb on - strand, within A4249_RS12865 at 2583.300 kb on + strand, within A4249_RS12865 at 2583.507 kb on + strand at 2583.507 kb on + strand at 2583.507 kb on + strand at 2583.507 kb on + strand at 2583.507 kb on + strand at 2583.508 kb on - strand at 2583.508 kb on - strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.509 kb on + strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.510 kb on - strand at 2583.511 kb on + strand at 2583.511 kb on + strand at 2583.511 kb on + strand at 2583.511 kb on + strand at 2583.511 kb on + strand at 2583.511 kb on + strand at 2583.511 kb on + strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.512 kb on - strand at 2583.558 kb on + strand at 2583.559 kb on - strand at 2583.559 kb on - strand at 2583.559 kb on - strand at 2583.765 kb on + strand, within A4249_RS12870 at 2583.765 kb on + strand, within A4249_RS12870 at 2583.765 kb on + strand, within A4249_RS12870 at 2583.765 kb on + strand, within A4249_RS12870 at 2583.765 kb on + strand, within A4249_RS12870 at 2583.765 kb on + strand, within A4249_RS12870 at 2583.766 kb on - strand, within A4249_RS12870 at 2583.766 kb on - strand, within A4249_RS12870 at 2583.766 kb on - strand, within A4249_RS12870 at 2584.000 kb on + strand at 2584.000 kb on + strand at 2584.000 kb on + strand at 2584.000 kb on + strand at 2584.000 kb on + strand at 2584.000 kb on + strand at 2584.001 kb on - strand at 2584.001 kb on - strand at 2584.132 kb on + strand at 2584.132 kb on + strand at 2584.133 kb on - strand at 2584.133 kb on - strand at 2584.133 kb on - strand at 2584.258 kb on + strand, within A4249_RS12875 at 2584.338 kb on + strand, within A4249_RS12875 at 2584.338 kb on + strand, within A4249_RS12875 at 2584.338 kb on + strand, within A4249_RS12875 at 2584.339 kb on - strand, within A4249_RS12875 at 2584.339 kb on - strand, within A4249_RS12875 at 2584.339 kb on - strand, within A4249_RS12875 at 2584.339 kb on - strand, within A4249_RS12875
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 2,581,608 - A4249_RS12855 0.83 -1.4 2,581,608 - A4249_RS12855 0.83 -0.1 2,581,608 - A4249_RS12855 0.83 +0.1 2,581,608 - A4249_RS12855 0.83 -0.8 2,581,608 - A4249_RS12855 0.83 -0.4 2,581,608 - A4249_RS12855 0.83 +0.5 2,581,608 - A4249_RS12855 0.83 -0.6 2,581,716 + -0.9 2,581,716 + -0.6 2,581,716 + +0.8 2,581,716 + -0.2 2,581,716 + -0.8 2,581,716 + -0.4 2,581,717 - -0.1 2,581,717 - -0.9 2,581,717 - +0.1 2,581,717 - -0.3 2,581,717 - +0.9 2,581,717 - -1.9 2,581,717 - -0.0 2,581,717 - -0.3 2,581,717 - -0.3 2,581,717 - -1.8 2,581,717 - +0.6 2,581,717 - -0.7 2,581,807 + A4249_RS12860 0.10 -0.8 2,582,079 + A4249_RS12860 0.72 +0.6 2,582,079 + A4249_RS12860 0.72 -0.1 2,582,080 - A4249_RS12860 0.72 -0.7 2,582,080 - A4249_RS12860 0.72 +0.9 2,582,269 + -1.4 2,582,269 + -0.1 2,582,269 + -0.3 2,582,269 + -0.8 2,582,269 + -1.2 2,582,269 + -1.0 2,582,269 + -0.3 2,582,269 + +0.3 2,582,269 + +0.4 2,582,269 + +0.3 2,582,270 - -1.2 2,582,270 - -0.2 2,582,270 - -0.1 2,582,270 - -1.1 2,582,270 - +0.3 2,582,338 + +0.1 2,582,338 + +1.6 2,582,339 - +0.4 2,582,436 + A4249_RS12865 0.10 +0.6 2,582,437 - A4249_RS12865 0.11 -0.0 2,582,497 - A4249_RS12865 0.16 -0.7 2,582,616 + A4249_RS12865 0.26 -1.9 2,582,616 + A4249_RS12865 0.26 +0.3 2,582,616 + A4249_RS12865 0.26 -0.3 2,582,616 + A4249_RS12865 0.26 -0.3 2,582,616 + A4249_RS12865 0.26 +0.2 2,582,616 + A4249_RS12865 0.26 -1.6 2,582,616 + A4249_RS12865 0.26 -0.3 2,582,616 + A4249_RS12865 0.26 +0.3 2,582,616 + A4249_RS12865 0.26 -2.4 2,582,617 - A4249_RS12865 0.26 -0.1 2,582,617 - A4249_RS12865 0.26 +0.9 2,582,617 - A4249_RS12865 0.26 +1.4 2,582,655 + A4249_RS12865 0.29 +1.3 2,582,656 - A4249_RS12865 0.29 -0.0 2,582,691 + A4249_RS12865 0.32 -0.5 2,582,691 + A4249_RS12865 0.32 -0.1 2,582,692 - A4249_RS12865 0.32 -0.3 2,582,898 + A4249_RS12865 0.50 -0.5 2,582,898 + A4249_RS12865 0.50 +0.1 2,582,898 + A4249_RS12865 0.50 -0.5 2,582,899 - A4249_RS12865 0.50 -0.1 2,582,899 - A4249_RS12865 0.50 -1.4 2,583,127 + A4249_RS12865 0.70 -1.0 2,583,127 + A4249_RS12865 0.70 -0.3 2,583,127 + A4249_RS12865 0.70 +1.9 2,583,127 + A4249_RS12865 0.70 +0.0 2,583,127 + A4249_RS12865 0.70 -0.6 2,583,128 - A4249_RS12865 0.70 +0.7 2,583,129 + A4249_RS12865 0.70 -1.2 2,583,129 + A4249_RS12865 0.70 -1.0 2,583,129 + A4249_RS12865 0.70 -0.6 2,583,129 + A4249_RS12865 0.70 +0.4 2,583,129 + A4249_RS12865 0.70 +0.9 2,583,129 + A4249_RS12865 0.70 +0.1 2,583,129 + A4249_RS12865 0.70 +0.4 2,583,129 + A4249_RS12865 0.70 -0.6 2,583,129 + A4249_RS12865 0.70 -1.0 2,583,129 + A4249_RS12865 0.70 -0.4 2,583,129 + A4249_RS12865 0.70 +0.3 2,583,129 + A4249_RS12865 0.70 +0.8 2,583,130 - A4249_RS12865 0.70 -0.1 2,583,130 - A4249_RS12865 0.70 +0.2 2,583,130 - A4249_RS12865 0.70 -0.1 2,583,130 - A4249_RS12865 0.70 -1.5 2,583,130 - A4249_RS12865 0.70 -0.4 2,583,130 - A4249_RS12865 0.70 -0.2 2,583,130 - A4249_RS12865 0.70 +0.1 2,583,130 - A4249_RS12865 0.70 -0.7 2,583,130 - A4249_RS12865 0.70 +0.0 2,583,130 - A4249_RS12865 0.70 +0.1 2,583,130 - A4249_RS12865 0.70 +0.6 2,583,130 - A4249_RS12865 0.70 +0.4 2,583,130 - A4249_RS12865 0.70 -0.0 2,583,300 + A4249_RS12865 0.85 +1.3 2,583,507 + +0.7 2,583,507 + -1.2 2,583,507 + +0.5 2,583,507 + -1.3 2,583,507 + +0.3 2,583,508 - +0.4 2,583,508 - -0.6 2,583,509 + +0.8 2,583,509 + -1.8 2,583,509 + +0.4 2,583,509 + -0.3 2,583,509 + -1.6 2,583,509 + -0.0 2,583,509 + -0.2 2,583,509 + +0.2 2,583,510 - +0.4 2,583,510 - +0.2 2,583,510 - +1.4 2,583,510 - -0.4 2,583,510 - +0.7 2,583,510 - +0.7 2,583,510 - -0.5 2,583,510 - +1.2 2,583,510 - +1.4 2,583,510 - -0.9 2,583,511 + -1.1 2,583,511 + -1.1 2,583,511 + -1.7 2,583,511 + -0.8 2,583,511 + -0.2 2,583,511 + +1.0 2,583,511 + -0.3 2,583,512 - +1.7 2,583,512 - -0.3 2,583,512 - +0.1 2,583,512 - -1.4 2,583,512 - +0.2 2,583,512 - -0.2 2,583,512 - -0.4 2,583,512 - -0.8 2,583,512 - -0.3 2,583,512 - +0.4 2,583,512 - +0.3 2,583,512 - -0.0 2,583,512 - -0.1 2,583,558 + +1.0 2,583,559 - +0.7 2,583,559 - -1.4 2,583,559 - -0.2 2,583,765 + A4249_RS12870 0.69 -0.0 2,583,765 + A4249_RS12870 0.69 +0.6 2,583,765 + A4249_RS12870 0.69 -1.6 2,583,765 + A4249_RS12870 0.69 -0.1 2,583,765 + A4249_RS12870 0.69 +0.4 2,583,765 + A4249_RS12870 0.69 -0.0 2,583,766 - A4249_RS12870 0.70 -0.3 2,583,766 - A4249_RS12870 0.70 +0.8 2,583,766 - A4249_RS12870 0.70 -1.0 2,584,000 + +1.7 2,584,000 + -0.5 2,584,000 + -0.1 2,584,000 + +0.9 2,584,000 + +0.7 2,584,000 + -1.0 2,584,001 - +0.1 2,584,001 - -0.5 2,584,132 + +0.9 2,584,132 + +0.4 2,584,133 - +0.2 2,584,133 - -0.4 2,584,133 - +1.0 2,584,258 + A4249_RS12875 0.17 +0.0 2,584,338 + A4249_RS12875 0.23 +0.3 2,584,338 + A4249_RS12875 0.23 -0.2 2,584,338 + A4249_RS12875 0.23 +0.2 2,584,339 - A4249_RS12875 0.23 -0.2 2,584,339 - A4249_RS12875 0.23 -0.9 2,584,339 - A4249_RS12875 0.23 +0.2 2,584,339 - A4249_RS12875 0.23 +1.6
Or see this region's nucleotide sequence