Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11105

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11100 and A4249_RS11105 are separated by 91 nucleotidesA4249_RS11105 and A4249_RS11110 are separated by 55 nucleotidesA4249_RS11110 and A4249_RS11115 are separated by 162 nucleotides A4249_RS11100: A4249_RS11100 - response regulator, at 2,234,376 to 2,235,971 _RS11100 A4249_RS11105: A4249_RS11105 - 50S ribosomal protein L20, at 2,236,063 to 2,236,416 _RS11105 A4249_RS11110: A4249_RS11110 - 50S ribosomal protein L35, at 2,236,472 to 2,236,669 _RS11110 A4249_RS11115: A4249_RS11115 - MFS transporter, at 2,236,832 to 2,238,136 _RS11115 Position (kb) 2236 2237Strain fitness (log2 ratio) -1 0 1 2at 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.852 kb on + strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.853 kb on - strandat 2235.854 kb on + strandat 2235.854 kb on + strandat 2235.855 kb on - strandat 2236.023 kb on + strandat 2236.023 kb on + strandat 2236.065 kb on - strandat 2236.065 kb on - strandat 2236.480 kb on - strandat 2236.743 kb on - strandat 2236.743 kb on - strandat 2236.743 kb on - strandat 2236.802 kb on - strandat 2236.802 kb on - strandat 2236.802 kb on - strandat 2237.366 kb on + strand, within A4249_RS11115at 2237.374 kb on - strand, within A4249_RS11115

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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2,235,852 + +0.2
2,235,852 + -1.3
2,235,852 + -0.4
2,235,852 + -1.0
2,235,852 + +1.9
2,235,852 + -0.8
2,235,852 + +0.4
2,235,852 + -0.3
2,235,852 + -0.1
2,235,852 + -0.1
2,235,852 + +0.5
2,235,853 - -0.4
2,235,853 - -0.4
2,235,853 - +0.4
2,235,853 - -0.3
2,235,853 - +0.1
2,235,853 - -0.1
2,235,854 + +0.8
2,235,854 + -0.8
2,235,855 - -0.2
2,236,023 + +1.5
2,236,023 + +1.9
2,236,065 - -1.0
2,236,065 - +0.9
2,236,480 - -0.1
2,236,743 - -1.0
2,236,743 - -0.3
2,236,743 - +1.0
2,236,802 - +1.1
2,236,802 - +0.3
2,236,802 - -0.7
2,237,366 + A4249_RS11115 0.41 +0.1
2,237,374 - A4249_RS11115 0.42 -0.5

Or see this region's nucleotide sequence