Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09435 and A4249_RS09440 are separated by 328 nucleotides A4249_RS09440 and A4249_RS09445 overlap by 4 nucleotides A4249_RS09445 and A4249_RS09450 are separated by 22 nucleotides
A4249_RS09435: A4249_RS09435 - TonB-dependent receptor, at 1,884,629 to 1,886,530
_RS09435
A4249_RS09440: A4249_RS09440 - metalloregulator ArsR/SmtB family transcription factor, at 1,886,859 to 1,887,164
_RS09440
A4249_RS09445: A4249_RS09445 - SdpI family protein, at 1,887,161 to 1,887,841
_RS09445
A4249_RS09450: A4249_RS09450 - alpha/beta hydrolase, at 1,887,864 to 1,888,805
_RS09450
Position (kb)
1887
1888 Strain fitness (log2 ratio)
-2
-1
0
1 at 1886.163 kb on - strand, within A4249_RS09435 at 1886.340 kb on + strand at 1886.341 kb on - strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.352 kb on + strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.353 kb on - strand at 1886.370 kb on + strand at 1886.370 kb on + strand at 1886.371 kb on - strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.394 kb on + strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.395 kb on - strand at 1886.502 kb on + strand at 1886.502 kb on + strand at 1886.502 kb on + strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.503 kb on - strand at 1886.821 kb on + strand at 1886.822 kb on - strand at 1886.822 kb on - strand at 1887.188 kb on + strand at 1887.189 kb on - strand at 1887.189 kb on - strand at 1887.189 kb on - strand at 1887.189 kb on - strand at 1887.189 kb on - strand at 1887.189 kb on - strand at 1887.189 kb on - strand at 1887.632 kb on + strand, within A4249_RS09445 at 1887.632 kb on + strand, within A4249_RS09445 at 1887.633 kb on - strand, within A4249_RS09445 at 1887.633 kb on - strand, within A4249_RS09445 at 1888.068 kb on + strand, within A4249_RS09450 at 1888.068 kb on + strand, within A4249_RS09450 at 1888.068 kb on + strand, within A4249_RS09450 at 1888.068 kb on + strand, within A4249_RS09450 at 1888.068 kb on + strand, within A4249_RS09450 at 1888.068 kb on + strand, within A4249_RS09450 at 1888.069 kb on - strand, within A4249_RS09450 at 1888.069 kb on - strand, within A4249_RS09450 at 1888.188 kb on + strand, within A4249_RS09450 at 1888.509 kb on + strand, within A4249_RS09450 at 1888.510 kb on - strand, within A4249_RS09450 at 1888.510 kb on - strand, within A4249_RS09450 at 1888.557 kb on + strand, within A4249_RS09450 at 1888.725 kb on + strand at 1888.725 kb on + strand at 1888.725 kb on + strand at 1888.725 kb on + strand at 1888.725 kb on + strand at 1888.725 kb on + strand at 1888.726 kb on - strand at 1888.804 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,886,163 - A4249_RS09435 0.81 +1.2 1,886,340 + -0.4 1,886,341 - +0.0 1,886,352 + +0.4 1,886,352 + -0.6 1,886,352 + -0.4 1,886,352 + -1.7 1,886,352 + -0.5 1,886,352 + -0.0 1,886,352 + -1.0 1,886,352 + +1.3 1,886,352 + -0.1 1,886,353 - -0.5 1,886,353 - +0.5 1,886,353 - +0.9 1,886,353 - -0.4 1,886,353 - -0.1 1,886,353 - -0.8 1,886,353 - +0.2 1,886,353 - -0.5 1,886,370 + +1.7 1,886,370 + +0.2 1,886,371 - -1.0 1,886,394 + +1.7 1,886,394 + +0.7 1,886,394 + +0.1 1,886,394 + +1.2 1,886,394 + +0.3 1,886,394 + -0.9 1,886,394 + -2.0 1,886,394 + -0.1 1,886,394 + +0.7 1,886,395 - -0.2 1,886,395 - -1.1 1,886,395 - +0.8 1,886,395 - -0.3 1,886,395 - -1.1 1,886,395 - -0.3 1,886,395 - +0.7 1,886,395 - -0.0 1,886,395 - +0.2 1,886,395 - +1.5 1,886,395 - -0.3 1,886,395 - -0.1 1,886,395 - -0.9 1,886,395 - -0.6 1,886,395 - +0.4 1,886,395 - -0.3 1,886,395 - +0.5 1,886,395 - +0.6 1,886,502 + -0.7 1,886,502 + -0.3 1,886,502 + +0.3 1,886,503 - +1.7 1,886,503 - +0.1 1,886,503 - -0.2 1,886,503 - +0.2 1,886,503 - -0.6 1,886,503 - -0.5 1,886,503 - +0.4 1,886,503 - +0.1 1,886,821 + -0.7 1,886,822 - +0.9 1,886,822 - -0.0 1,887,188 + -0.5 1,887,189 - +0.3 1,887,189 - -0.3 1,887,189 - -0.0 1,887,189 - -0.6 1,887,189 - +1.4 1,887,189 - -1.6 1,887,189 - -1.0 1,887,632 + A4249_RS09445 0.69 -0.1 1,887,632 + A4249_RS09445 0.69 +0.1 1,887,633 - A4249_RS09445 0.69 -1.0 1,887,633 - A4249_RS09445 0.69 -1.3 1,888,068 + A4249_RS09450 0.22 -0.5 1,888,068 + A4249_RS09450 0.22 -0.4 1,888,068 + A4249_RS09450 0.22 +0.2 1,888,068 + A4249_RS09450 0.22 -0.4 1,888,068 + A4249_RS09450 0.22 -0.5 1,888,068 + A4249_RS09450 0.22 -0.9 1,888,069 - A4249_RS09450 0.22 -0.7 1,888,069 - A4249_RS09450 0.22 -1.1 1,888,188 + A4249_RS09450 0.34 -0.6 1,888,509 + A4249_RS09450 0.68 +0.3 1,888,510 - A4249_RS09450 0.69 +0.6 1,888,510 - A4249_RS09450 0.69 +1.0 1,888,557 + A4249_RS09450 0.74 +0.3 1,888,725 + -0.6 1,888,725 + +0.2 1,888,725 + -0.2 1,888,725 + +1.3 1,888,725 + -0.0 1,888,725 + -0.9 1,888,726 - +1.5 1,888,804 - -0.3
Or see this region's nucleotide sequence