Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08970

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08965 and A4249_RS08970 are separated by 37 nucleotidesA4249_RS08970 and A4249_RS08975 are separated by 20 nucleotidesA4249_RS08975 and A4249_RS08980 are separated by 4 nucleotides A4249_RS08965: A4249_RS08965 - Hsp33 family molecular chaperone, at 1,795,173 to 1,796,096 _RS08965 A4249_RS08970: A4249_RS08970 - phosphate regulon transcriptional regulator PhoB, at 1,796,134 to 1,796,826 _RS08970 A4249_RS08975: A4249_RS08975 - phosphate signaling complex protein PhoU, at 1,796,847 to 1,797,572 _RS08975 A4249_RS08980: A4249_RS08980 - phosphate ABC transporter ATP-binding protein PstB, at 1,797,577 to 1,798,524 _RS08980 Position (kb) 1796 1797Strain fitness (log2 ratio) -1 0 1at 1795.134 kb on + strandat 1795.135 kb on - strandat 1795.135 kb on - strandat 1795.135 kb on - strandat 1796.055 kb on + strandat 1796.055 kb on + strandat 1796.055 kb on + strandat 1796.135 kb on + strandat 1796.135 kb on + strandat 1796.135 kb on + strandat 1796.136 kb on - strandat 1796.136 kb on - strandat 1796.136 kb on - strandat 1796.136 kb on - strandat 1797.547 kb on + strandat 1797.578 kb on + strandat 1797.599 kb on + strandat 1797.599 kb on + strandat 1797.599 kb on + strandat 1797.599 kb on + strandat 1797.600 kb on - strandat 1797.600 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,795,134 + +0.5
1,795,135 - -0.7
1,795,135 - -0.4
1,795,135 - -0.4
1,796,055 + +0.6
1,796,055 + +0.8
1,796,055 + -1.0
1,796,135 + -0.4
1,796,135 + -0.3
1,796,135 + -0.2
1,796,136 - -0.5
1,796,136 - -0.8
1,796,136 - +0.3
1,796,136 - -0.5
1,797,547 + +0.4
1,797,578 + -0.5
1,797,599 + +0.3
1,797,599 + +0.2
1,797,599 + +0.4
1,797,599 + +0.3
1,797,600 - -0.7
1,797,600 - -0.2

Or see this region's nucleotide sequence