Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07360

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07345 and A4249_RS07350 are separated by 65 nucleotidesA4249_RS07350 and A4249_RS07355 are separated by 86 nucleotidesA4249_RS07355 and A4249_RS07360 are separated by 65 nucleotidesA4249_RS07360 and A4249_RS07365 are separated by 78 nucleotides A4249_RS07345: A4249_RS07345 - lipoyl(octanoyl) transferase LipB, at 1,465,892 to 1,466,608 _RS07345 A4249_RS07350: A4249_RS07350 - FliM/FliN family flagellar motor switch protein, at 1,466,674 to 1,466,925 _RS07350 A4249_RS07355: A4249_RS07355 - tRNA-Leu, at 1,467,012 to 1,467,096 _RS07355 A4249_RS07360: A4249_RS07360 - magnesium transporter, at 1,467,162 to 1,468,580 _RS07360 A4249_RS07365: A4249_RS07365 - lysozyme, at 1,468,659 to 1,469,813 _RS07365 Position (kb) 1467 1468 1469Strain fitness (log2 ratio) -2 -1 0 1 2at 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.671 kb on + strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.672 kb on - strandat 1466.824 kb on + strand, within A4249_RS07350at 1466.824 kb on + strand, within A4249_RS07350at 1466.824 kb on + strand, within A4249_RS07350at 1466.824 kb on + strand, within A4249_RS07350at 1466.825 kb on - strand, within A4249_RS07350at 1466.899 kb on + strand, within A4249_RS07350at 1466.899 kb on + strand, within A4249_RS07350at 1466.899 kb on + strand, within A4249_RS07350at 1466.899 kb on + strand, within A4249_RS07350at 1466.900 kb on - strandat 1466.900 kb on - strandat 1466.900 kb on - strandat 1466.900 kb on - strandat 1466.900 kb on - strandat 1467.124 kb on + strandat 1467.124 kb on + strandat 1467.128 kb on + strandat 1467.128 kb on + strandat 1467.128 kb on + strandat 1467.129 kb on - strandat 1467.129 kb on - strandat 1467.129 kb on - strandat 1467.129 kb on - strandat 1467.129 kb on - strandat 1467.143 kb on + strandat 1467.143 kb on + strandat 1467.143 kb on + strandat 1467.143 kb on + strandat 1467.143 kb on + strandat 1467.144 kb on - strandat 1467.144 kb on - strandat 1467.144 kb on - strandat 1467.144 kb on - strandat 1467.144 kb on - strandat 1467.237 kb on + strandat 1468.578 kb on + strandat 1468.578 kb on + strandat 1468.579 kb on - strandat 1468.579 kb on - strandat 1468.579 kb on - strandat 1468.841 kb on + strand, within A4249_RS07365at 1468.841 kb on + strand, within A4249_RS07365at 1468.841 kb on + strand, within A4249_RS07365at 1468.841 kb on + strand, within A4249_RS07365at 1468.841 kb on + strand, within A4249_RS07365at 1468.842 kb on - strand, within A4249_RS07365at 1468.842 kb on - strand, within A4249_RS07365at 1468.842 kb on - strand, within A4249_RS07365at 1468.842 kb on - strand, within A4249_RS07365at 1468.842 kb on - strand, within A4249_RS07365at 1468.842 kb on - strand, within A4249_RS07365at 1468.848 kb on + strand, within A4249_RS07365at 1468.848 kb on + strand, within A4249_RS07365at 1468.848 kb on + strand, within A4249_RS07365at 1468.848 kb on + strand, within A4249_RS07365at 1468.848 kb on + strand, within A4249_RS07365at 1468.848 kb on + strand, within A4249_RS07365at 1468.849 kb on - strand, within A4249_RS07365at 1468.849 kb on - strand, within A4249_RS07365at 1468.849 kb on - strand, within A4249_RS07365at 1468.941 kb on + strand, within A4249_RS07365at 1469.118 kb on - strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.292 kb on + strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365at 1469.293 kb on - strand, within A4249_RS07365

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,466,671 + -1.7
1,466,671 + -0.5
1,466,671 + +1.3
1,466,671 + -2.2
1,466,671 + -0.5
1,466,671 + +0.2
1,466,671 + -0.7
1,466,671 + +0.0
1,466,671 + -0.9
1,466,672 - +0.5
1,466,672 - -0.3
1,466,672 - +0.0
1,466,672 - +0.0
1,466,672 - +0.3
1,466,672 - -0.3
1,466,672 - -0.2
1,466,672 - -0.2
1,466,672 - +0.4
1,466,672 - +0.4
1,466,824 + A4249_RS07350 0.60 +0.2
1,466,824 + A4249_RS07350 0.60 +0.4
1,466,824 + A4249_RS07350 0.60 -0.6
1,466,824 + A4249_RS07350 0.60 -0.1
1,466,825 - A4249_RS07350 0.60 +2.0
1,466,899 + A4249_RS07350 0.89 -1.2
1,466,899 + A4249_RS07350 0.89 +0.1
1,466,899 + A4249_RS07350 0.89 -0.1
1,466,899 + A4249_RS07350 0.89 +0.5
1,466,900 - +0.0
1,466,900 - -1.6
1,466,900 - -0.6
1,466,900 - -0.7
1,466,900 - -0.1
1,467,124 + -0.2
1,467,124 + -0.7
1,467,128 + +0.7
1,467,128 + -0.3
1,467,128 + -0.4
1,467,129 - +1.1
1,467,129 - +0.2
1,467,129 - +1.6
1,467,129 - -0.9
1,467,129 - -0.1
1,467,143 + +0.3
1,467,143 + -0.2
1,467,143 + -0.4
1,467,143 + -0.3
1,467,143 + -0.3
1,467,144 - -1.7
1,467,144 - +0.1
1,467,144 - -0.6
1,467,144 - -0.6
1,467,144 - +0.1
1,467,237 + +0.5
1,468,578 + -0.1
1,468,578 + +0.5
1,468,579 - -0.5
1,468,579 - +1.6
1,468,579 - +0.5
1,468,841 + A4249_RS07365 0.16 +0.9
1,468,841 + A4249_RS07365 0.16 +0.7
1,468,841 + A4249_RS07365 0.16 +0.6
1,468,841 + A4249_RS07365 0.16 +0.4
1,468,841 + A4249_RS07365 0.16 +1.6
1,468,842 - A4249_RS07365 0.16 +0.1
1,468,842 - A4249_RS07365 0.16 +1.0
1,468,842 - A4249_RS07365 0.16 -0.8
1,468,842 - A4249_RS07365 0.16 -0.8
1,468,842 - A4249_RS07365 0.16 +0.9
1,468,842 - A4249_RS07365 0.16 +0.1
1,468,848 + A4249_RS07365 0.16 -1.2
1,468,848 + A4249_RS07365 0.16 +0.4
1,468,848 + A4249_RS07365 0.16 -0.8
1,468,848 + A4249_RS07365 0.16 -0.8
1,468,848 + A4249_RS07365 0.16 +0.2
1,468,848 + A4249_RS07365 0.16 -0.5
1,468,849 - A4249_RS07365 0.16 -0.1
1,468,849 - A4249_RS07365 0.16 +0.5
1,468,849 - A4249_RS07365 0.16 +1.0
1,468,941 + A4249_RS07365 0.24 -2.7
1,469,118 - A4249_RS07365 0.40 +1.0
1,469,292 + A4249_RS07365 0.55 -1.5
1,469,292 + A4249_RS07365 0.55 +0.2
1,469,292 + A4249_RS07365 0.55 -0.5
1,469,292 + A4249_RS07365 0.55 -0.8
1,469,292 + A4249_RS07365 0.55 -0.5
1,469,292 + A4249_RS07365 0.55 -1.4
1,469,292 + A4249_RS07365 0.55 -0.4
1,469,292 + A4249_RS07365 0.55 -1.8
1,469,293 - A4249_RS07365 0.55 +0.3
1,469,293 - A4249_RS07365 0.55 +1.5
1,469,293 - A4249_RS07365 0.55 +0.0
1,469,293 - A4249_RS07365 0.55 -1.5
1,469,293 - A4249_RS07365 0.55 +0.6
1,469,293 - A4249_RS07365 0.55 -1.6
1,469,293 - A4249_RS07365 0.55 -0.7
1,469,293 - A4249_RS07365 0.55 -1.5
1,469,293 - A4249_RS07365 0.55 -0.1
1,469,293 - A4249_RS07365 0.55 +0.8
1,469,293 - A4249_RS07365 0.55 -0.3
1,469,293 - A4249_RS07365 0.55 +0.7
1,469,293 - A4249_RS07365 0.55 -0.0
1,469,293 - A4249_RS07365 0.55 +0.5
1,469,293 - A4249_RS07365 0.55 -0.1

Or see this region's nucleotide sequence