Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06775

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06770 and A4249_RS06775 are separated by 315 nucleotidesA4249_RS06775 and A4249_RS06780 overlap by 11 nucleotidesA4249_RS06780 and A4249_RS06785 overlap by 4 nucleotides A4249_RS06770: A4249_RS06770 - ATP-binding protein, at 1,379,039 to 1,380,670 _RS06770 A4249_RS06775: A4249_RS06775 - guanylate kinase, at 1,380,986 to 1,381,627 _RS06775 A4249_RS06780: A4249_RS06780 - YicC family protein, at 1,381,617 to 1,382,501 _RS06780 A4249_RS06785: A4249_RS06785 - endolytic transglycosylase MltG, at 1,382,498 to 1,383,658 _RS06785 Position (kb) 1380 1381 1382Strain fitness (log2 ratio) -2 -1 0 1at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.258 kb on + strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.259 kb on - strand, within A4249_RS06770at 1380.372 kb on + strand, within A4249_RS06770at 1380.372 kb on + strand, within A4249_RS06770at 1380.372 kb on + strand, within A4249_RS06770at 1380.373 kb on - strand, within A4249_RS06770at 1380.373 kb on - strand, within A4249_RS06770at 1380.373 kb on - strand, within A4249_RS06770at 1380.435 kb on - strand, within A4249_RS06770at 1380.516 kb on + strandat 1380.516 kb on + strandat 1380.516 kb on + strandat 1380.516 kb on + strandat 1380.516 kb on + strandat 1380.516 kb on + strandat 1380.516 kb on + strandat 1380.517 kb on - strandat 1380.517 kb on - strandat 1380.517 kb on - strandat 1380.517 kb on - strandat 1380.517 kb on - strandat 1380.517 kb on - strandat 1380.604 kb on + strandat 1380.604 kb on + strandat 1380.605 kb on - strandat 1380.605 kb on - strandat 1380.699 kb on + strandat 1380.794 kb on - strandat 1380.816 kb on + strandat 1380.816 kb on + strandat 1380.816 kb on + strandat 1380.816 kb on + strandat 1380.817 kb on - strandat 1380.817 kb on - strandat 1380.817 kb on - strandat 1380.841 kb on - strandat 1380.841 kb on - strandat 1380.841 kb on - strandat 1380.841 kb on - strandat 1380.877 kb on - strandat 1380.888 kb on + strandat 1380.889 kb on - strandat 1380.926 kb on + strandat 1380.926 kb on + strandat 1380.926 kb on + strandat 1380.926 kb on + strandat 1380.927 kb on - strandat 1380.927 kb on - strandat 1380.927 kb on - strandat 1380.927 kb on - strandat 1380.931 kb on + strandat 1380.932 kb on - strandat 1380.932 kb on - strandat 1380.941 kb on + strandat 1380.941 kb on + strandat 1382.234 kb on - strand, within A4249_RS06780

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,380,258 + A4249_RS06770 0.75 -0.7
1,380,258 + A4249_RS06770 0.75 -1.0
1,380,258 + A4249_RS06770 0.75 +0.1
1,380,258 + A4249_RS06770 0.75 +0.4
1,380,258 + A4249_RS06770 0.75 -0.9
1,380,258 + A4249_RS06770 0.75 -2.2
1,380,258 + A4249_RS06770 0.75 -0.6
1,380,258 + A4249_RS06770 0.75 -0.2
1,380,258 + A4249_RS06770 0.75 -0.0
1,380,258 + A4249_RS06770 0.75 -0.5
1,380,258 + A4249_RS06770 0.75 -0.4
1,380,259 - A4249_RS06770 0.75 +0.2
1,380,259 - A4249_RS06770 0.75 +0.3
1,380,259 - A4249_RS06770 0.75 -1.1
1,380,259 - A4249_RS06770 0.75 -0.4
1,380,259 - A4249_RS06770 0.75 -2.2
1,380,259 - A4249_RS06770 0.75 -0.0
1,380,259 - A4249_RS06770 0.75 +0.2
1,380,259 - A4249_RS06770 0.75 -1.3
1,380,259 - A4249_RS06770 0.75 +0.9
1,380,259 - A4249_RS06770 0.75 +0.4
1,380,259 - A4249_RS06770 0.75 +0.3
1,380,259 - A4249_RS06770 0.75 +0.1
1,380,372 + A4249_RS06770 0.82 +0.7
1,380,372 + A4249_RS06770 0.82 +0.9
1,380,372 + A4249_RS06770 0.82 +0.5
1,380,373 - A4249_RS06770 0.82 -0.5
1,380,373 - A4249_RS06770 0.82 -0.7
1,380,373 - A4249_RS06770 0.82 -0.6
1,380,435 - A4249_RS06770 0.86 -0.9
1,380,516 + +0.8
1,380,516 + -0.0
1,380,516 + -1.2
1,380,516 + -0.8
1,380,516 + +0.3
1,380,516 + +0.4
1,380,516 + -0.2
1,380,517 - -0.3
1,380,517 - -1.8
1,380,517 - +0.1
1,380,517 - +0.2
1,380,517 - -1.7
1,380,517 - -0.0
1,380,604 + -1.2
1,380,604 + -0.5
1,380,605 - -0.3
1,380,605 - +0.2
1,380,699 + +0.1
1,380,794 - -0.7
1,380,816 + +0.4
1,380,816 + -0.4
1,380,816 + +1.5
1,380,816 + -1.2
1,380,817 - -0.4
1,380,817 - +0.4
1,380,817 - -0.8
1,380,841 - -0.2
1,380,841 - +0.7
1,380,841 - +0.8
1,380,841 - -1.6
1,380,877 - +0.5
1,380,888 + -0.5
1,380,889 - -0.3
1,380,926 + -1.3
1,380,926 + +0.2
1,380,926 + -0.8
1,380,926 + -0.6
1,380,927 - -0.0
1,380,927 - -1.0
1,380,927 - -0.2
1,380,927 - -1.1
1,380,931 + +0.9
1,380,932 - -1.3
1,380,932 - -1.6
1,380,941 + +1.5
1,380,941 + +0.6
1,382,234 - A4249_RS06780 0.70 -0.7

Or see this region's nucleotide sequence