Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06355 and A4249_RS06360 overlap by 1 nucleotides A4249_RS06360 and A4249_RS06365 are separated by 73 nucleotides A4249_RS06365 and A4249_RS06370 overlap by 1 nucleotides A4249_RS06370 and A4249_RS06375 overlap by 1 nucleotides
A4249_RS06355: A4249_RS06355 - NADH-quinone oxidoreductase subunit NuoK, at 1,297,461 to 1,297,766
_RS06355
A4249_RS06360: A4249_RS06360 - NADH-quinone oxidoreductase subunit J, at 1,297,766 to 1,298,392
_RS06360
A4249_RS06365: A4249_RS06365 - NADH-quinone oxidoreductase subunit NuoI, at 1,298,466 to 1,298,957
_RS06365
A4249_RS06370: A4249_RS06370 - hypothetical protein, at 1,298,957 to 1,299,136
_RS06370
A4249_RS06375: A4249_RS06375 - NADH-quinone oxidoreductase subunit NuoH, at 1,299,136 to 1,300,209
_RS06375
Position (kb) 1298
1299 Strain fitness (log2 ratio) -1
0
1 at 1298.474 kb on - strand at 1299.051 kb on + strand, within A4249_RS06370 at 1299.051 kb on + strand, within A4249_RS06370 at 1299.051 kb on + strand, within A4249_RS06370 at 1299.052 kb on - strand, within A4249_RS06370
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,298,474 - +0.2 1,299,051 + A4249_RS06370 0.52 -0.3 1,299,051 + A4249_RS06370 0.52 -0.2 1,299,051 + A4249_RS06370 0.52 +0.5 1,299,052 - A4249_RS06370 0.53 -0.7
Or see this region's nucleotide sequence