Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05670 and A4249_RS05675 are separated by 80 nucleotides A4249_RS05675 and A4249_RS05680 are separated by 114 nucleotides A4249_RS05680 and A4249_RS05685 are separated by 35 nucleotides
A4249_RS05670: A4249_RS05670 - type I glutamate--ammonia ligase, at 1,159,713 to 1,161,119
_RS05670
A4249_RS05675: A4249_RS05675 - P-II family nitrogen regulator, at 1,161,200 to 1,161,538
_RS05675
A4249_RS05680: A4249_RS05680 - NAD(P)H-hydrate dehydratase, at 1,161,653 to 1,162,483
_RS05680
A4249_RS05685: A4249_RS05685 - error-prone DNA polymerase, at 1,162,519 to 1,165,872
_RS05685
Position (kb)
1161
1162
1163 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1161.192 kb on + strand at 1161.193 kb on - strand at 1161.657 kb on + strand at 1161.657 kb on + strand at 1161.657 kb on + strand at 1161.657 kb on + strand at 1161.658 kb on - strand at 1161.658 kb on - strand at 1161.658 kb on - strand at 1161.658 kb on - strand at 1161.912 kb on + strand, within A4249_RS05680 at 1161.912 kb on + strand, within A4249_RS05680 at 1161.912 kb on + strand, within A4249_RS05680 at 1161.913 kb on - strand, within A4249_RS05680 at 1161.913 kb on - strand, within A4249_RS05680 at 1161.913 kb on - strand, within A4249_RS05680 at 1161.913 kb on - strand, within A4249_RS05680 at 1161.966 kb on + strand, within A4249_RS05680 at 1162.071 kb on + strand, within A4249_RS05680 at 1162.071 kb on + strand, within A4249_RS05680 at 1162.071 kb on + strand, within A4249_RS05680 at 1162.071 kb on + strand, within A4249_RS05680 at 1162.071 kb on + strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.072 kb on - strand, within A4249_RS05680 at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.433 kb on + strand at 1162.434 kb on - strand at 1162.434 kb on - strand at 1162.434 kb on - strand at 1162.434 kb on - strand at 1162.434 kb on - strand at 1162.434 kb on - strand at 1162.471 kb on + strand at 1162.533 kb on + strand at 1162.534 kb on - strand at 1162.548 kb on + strand at 1162.548 kb on + strand at 1162.548 kb on + strand at 1162.548 kb on + strand at 1162.548 kb on + strand at 1162.549 kb on - strand at 1162.549 kb on - strand at 1162.549 kb on - strand at 1162.549 kb on - strand at 1162.549 kb on - strand at 1162.549 kb on - strand at 1162.549 kb on - strand at 1162.831 kb on + strand at 1162.831 kb on + strand at 1162.831 kb on + strand at 1162.832 kb on - strand at 1162.832 kb on - strand at 1162.832 kb on - strand at 1162.832 kb on - strand at 1162.939 kb on + strand, within A4249_RS05685 at 1162.939 kb on + strand, within A4249_RS05685 at 1162.939 kb on + strand, within A4249_RS05685 at 1162.939 kb on + strand, within A4249_RS05685 at 1162.939 kb on + strand, within A4249_RS05685 at 1162.939 kb on + strand, within A4249_RS05685 at 1162.940 kb on - strand, within A4249_RS05685 at 1162.940 kb on - strand, within A4249_RS05685 at 1163.015 kb on + strand, within A4249_RS05685 at 1163.016 kb on - strand, within A4249_RS05685 at 1163.137 kb on + strand, within A4249_RS05685 at 1163.137 kb on + strand, within A4249_RS05685 at 1163.138 kb on - strand, within A4249_RS05685 at 1163.146 kb on + strand, within A4249_RS05685 at 1163.146 kb on + strand, within A4249_RS05685 at 1163.147 kb on - strand, within A4249_RS05685 at 1163.147 kb on - strand, within A4249_RS05685 at 1163.147 kb on - strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.384 kb on + strand, within A4249_RS05685 at 1163.385 kb on - strand, within A4249_RS05685 at 1163.385 kb on - strand, within A4249_RS05685 at 1163.385 kb on - strand, within A4249_RS05685 at 1163.385 kb on - strand, within A4249_RS05685 at 1163.435 kb on - strand, within A4249_RS05685 at 1163.453 kb on + strand, within A4249_RS05685 at 1163.453 kb on + strand, within A4249_RS05685 at 1163.453 kb on + strand, within A4249_RS05685 at 1163.453 kb on + strand, within A4249_RS05685 at 1163.453 kb on + strand, within A4249_RS05685 at 1163.454 kb on - strand, within A4249_RS05685 at 1163.454 kb on - strand, within A4249_RS05685 at 1163.454 kb on - strand, within A4249_RS05685
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,161,192 + +0.1 1,161,193 - -0.3 1,161,657 + +0.3 1,161,657 + +0.4 1,161,657 + -0.3 1,161,657 + +0.2 1,161,658 - +0.5 1,161,658 - -1.0 1,161,658 - -0.1 1,161,658 - -0.7 1,161,912 + A4249_RS05680 0.31 +2.0 1,161,912 + A4249_RS05680 0.31 +0.1 1,161,912 + A4249_RS05680 0.31 -0.1 1,161,913 - A4249_RS05680 0.31 +1.7 1,161,913 - A4249_RS05680 0.31 -0.7 1,161,913 - A4249_RS05680 0.31 +1.0 1,161,913 - A4249_RS05680 0.31 -0.5 1,161,966 + A4249_RS05680 0.38 -0.1 1,162,071 + A4249_RS05680 0.50 +1.6 1,162,071 + A4249_RS05680 0.50 +1.0 1,162,071 + A4249_RS05680 0.50 +0.9 1,162,071 + A4249_RS05680 0.50 -0.3 1,162,071 + A4249_RS05680 0.50 +1.0 1,162,072 - A4249_RS05680 0.50 -0.2 1,162,072 - A4249_RS05680 0.50 -0.5 1,162,072 - A4249_RS05680 0.50 +0.1 1,162,072 - A4249_RS05680 0.50 +0.8 1,162,072 - A4249_RS05680 0.50 +1.4 1,162,072 - A4249_RS05680 0.50 -0.3 1,162,072 - A4249_RS05680 0.50 +0.6 1,162,433 + -0.9 1,162,433 + -0.2 1,162,433 + -0.3 1,162,433 + +0.9 1,162,433 + +0.7 1,162,433 + +1.1 1,162,433 + -0.3 1,162,433 + -1.8 1,162,433 + +0.3 1,162,434 - +0.8 1,162,434 - +0.8 1,162,434 - +0.5 1,162,434 - +0.0 1,162,434 - +0.7 1,162,434 - +0.4 1,162,471 + -1.0 1,162,533 + +0.4 1,162,534 - +0.7 1,162,548 + +0.6 1,162,548 + -0.7 1,162,548 + +2.4 1,162,548 + +1.6 1,162,548 + -0.5 1,162,549 - -1.0 1,162,549 - +0.3 1,162,549 - -0.1 1,162,549 - +0.6 1,162,549 - -0.6 1,162,549 - -1.2 1,162,549 - -1.0 1,162,831 + -0.7 1,162,831 + -0.0 1,162,831 + -0.0 1,162,832 - +0.5 1,162,832 - -0.6 1,162,832 - -0.2 1,162,832 - +0.2 1,162,939 + A4249_RS05685 0.13 -0.9 1,162,939 + A4249_RS05685 0.13 -0.3 1,162,939 + A4249_RS05685 0.13 -0.4 1,162,939 + A4249_RS05685 0.13 -0.1 1,162,939 + A4249_RS05685 0.13 -0.6 1,162,939 + A4249_RS05685 0.13 +0.4 1,162,940 - A4249_RS05685 0.13 +0.5 1,162,940 - A4249_RS05685 0.13 +0.7 1,163,015 + A4249_RS05685 0.15 -0.4 1,163,016 - A4249_RS05685 0.15 +0.3 1,163,137 + A4249_RS05685 0.18 -1.2 1,163,137 + A4249_RS05685 0.18 -0.6 1,163,138 - A4249_RS05685 0.18 +0.0 1,163,146 + A4249_RS05685 0.19 -0.5 1,163,146 + A4249_RS05685 0.19 -0.5 1,163,147 - A4249_RS05685 0.19 -1.2 1,163,147 - A4249_RS05685 0.19 +0.3 1,163,147 - A4249_RS05685 0.19 +0.5 1,163,384 + A4249_RS05685 0.26 -0.9 1,163,384 + A4249_RS05685 0.26 +0.6 1,163,384 + A4249_RS05685 0.26 -0.6 1,163,384 + A4249_RS05685 0.26 +0.3 1,163,384 + A4249_RS05685 0.26 +0.3 1,163,384 + A4249_RS05685 0.26 -0.4 1,163,384 + A4249_RS05685 0.26 -0.5 1,163,384 + A4249_RS05685 0.26 -0.3 1,163,384 + A4249_RS05685 0.26 +0.0 1,163,384 + A4249_RS05685 0.26 -2.1 1,163,385 - A4249_RS05685 0.26 -0.6 1,163,385 - A4249_RS05685 0.26 -0.1 1,163,385 - A4249_RS05685 0.26 -0.1 1,163,385 - A4249_RS05685 0.26 +0.4 1,163,435 - A4249_RS05685 0.27 -0.3 1,163,453 + A4249_RS05685 0.28 -0.2 1,163,453 + A4249_RS05685 0.28 -2.0 1,163,453 + A4249_RS05685 0.28 +1.4 1,163,453 + A4249_RS05685 0.28 -0.1 1,163,453 + A4249_RS05685 0.28 -1.0 1,163,454 - A4249_RS05685 0.28 -0.6 1,163,454 - A4249_RS05685 0.28 -0.2 1,163,454 - A4249_RS05685 0.28 -1.6
Or see this region's nucleotide sequence