Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05615 and A4249_RS05620 are separated by 18 nucleotides A4249_RS05620 and A4249_RS05625 are separated by 8 nucleotides A4249_RS05625 and A4249_RS05630 overlap by 1 nucleotides
A4249_RS05615: A4249_RS05615 - 3-deoxy-8-phosphooctulonate synthase, at 1,149,904 to 1,150,815
_RS05615
A4249_RS05620: A4249_RS05620 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 1,150,834 to 1,152,288
_RS05620
A4249_RS05625: A4249_RS05625 - ADP-glyceromanno-heptose 6-epimerase, at 1,152,297 to 1,153,286
_RS05625
A4249_RS05630: A4249_RS05630 - DUF3089 domain-containing protein, at 1,153,286 to 1,154,377
_RS05630
Position (kb)
1150
1151
1152
1153 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1149.843 kb on + strand at 1149.844 kb on - strand at 1149.844 kb on - strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.885 kb on + strand at 1149.886 kb on - strand at 1149.886 kb on - strand at 1149.886 kb on - strand at 1150.822 kb on + strand at 1150.823 kb on - strand at 1150.823 kb on - strand at 1150.930 kb on + strand at 1150.936 kb on + strand at 1150.936 kb on + strand at 1150.936 kb on + strand at 1150.979 kb on + strand at 1150.980 kb on - strand, within A4249_RS05620 at 1151.281 kb on + strand, within A4249_RS05620 at 1151.281 kb on + strand, within A4249_RS05620 at 1151.643 kb on + strand, within A4249_RS05620 at 1151.757 kb on + strand, within A4249_RS05620 at 1151.757 kb on + strand, within A4249_RS05620 at 1151.757 kb on + strand, within A4249_RS05620 at 1151.932 kb on + strand, within A4249_RS05620 at 1152.162 kb on + strand at 1152.162 kb on + strand at 1152.162 kb on + strand at 1152.163 kb on - strand at 1152.163 kb on - strand at 1152.369 kb on + strand at 1152.369 kb on + strand at 1152.369 kb on + strand at 1152.369 kb on + strand at 1152.518 kb on + strand, within A4249_RS05625 at 1152.518 kb on + strand, within A4249_RS05625 at 1152.518 kb on + strand, within A4249_RS05625 at 1152.518 kb on + strand, within A4249_RS05625 at 1152.518 kb on + strand, within A4249_RS05625 at 1152.518 kb on + strand, within A4249_RS05625 at 1152.595 kb on + strand, within A4249_RS05625 at 1152.596 kb on - strand, within A4249_RS05625 at 1152.596 kb on - strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.633 kb on + strand, within A4249_RS05625 at 1152.654 kb on + strand, within A4249_RS05625 at 1152.654 kb on + strand, within A4249_RS05625 at 1152.654 kb on + strand, within A4249_RS05625 at 1152.654 kb on + strand, within A4249_RS05625 at 1152.703 kb on + strand, within A4249_RS05625 at 1152.703 kb on + strand, within A4249_RS05625 at 1152.703 kb on + strand, within A4249_RS05625 at 1152.759 kb on + strand, within A4249_RS05625 at 1152.848 kb on + strand, within A4249_RS05625 at 1152.848 kb on + strand, within A4249_RS05625 at 1152.849 kb on - strand, within A4249_RS05625 at 1152.939 kb on + strand, within A4249_RS05625 at 1152.939 kb on + strand, within A4249_RS05625 at 1152.939 kb on + strand, within A4249_RS05625 at 1152.972 kb on + strand, within A4249_RS05625 at 1152.972 kb on + strand, within A4249_RS05625 at 1152.972 kb on + strand, within A4249_RS05625 at 1152.972 kb on + strand, within A4249_RS05625 at 1153.122 kb on + strand, within A4249_RS05625 at 1153.122 kb on + strand, within A4249_RS05625 at 1153.161 kb on + strand, within A4249_RS05625 at 1153.161 kb on + strand, within A4249_RS05625 at 1153.161 kb on + strand, within A4249_RS05625 at 1153.161 kb on + strand, within A4249_RS05625 at 1153.246 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 1,149,843 + -1.1 1,149,844 - -0.5 1,149,844 - -0.4 1,149,885 + +0.1 1,149,885 + -1.2 1,149,885 + -0.1 1,149,885 + -0.4 1,149,886 - -0.0 1,149,886 - -0.9 1,149,886 - -0.6 1,150,822 + -0.9 1,150,823 - -0.3 1,150,823 - -2.4 1,150,930 + +1.8 1,150,936 + +2.8 1,150,936 + +0.3 1,150,936 + -0.3 1,150,979 + -0.5 1,150,980 - A4249_RS05620 0.10 +0.3 1,151,281 + A4249_RS05620 0.31 -1.4 1,151,281 + A4249_RS05620 0.31 -1.3 1,151,643 + A4249_RS05620 0.56 -0.6 1,151,757 + A4249_RS05620 0.63 -1.0 1,151,757 + A4249_RS05620 0.63 +0.2 1,151,757 + A4249_RS05620 0.63 -0.8 1,151,932 + A4249_RS05620 0.75 -0.2 1,152,162 + +0.4 1,152,162 + -1.0 1,152,162 + +0.5 1,152,163 - +2.8 1,152,163 - +2.8 1,152,369 + -0.4 1,152,369 + -0.5 1,152,369 + -0.5 1,152,369 + -0.4 1,152,518 + A4249_RS05625 0.22 -0.8 1,152,518 + A4249_RS05625 0.22 -1.1 1,152,518 + A4249_RS05625 0.22 -0.6 1,152,518 + A4249_RS05625 0.22 -0.7 1,152,518 + A4249_RS05625 0.22 -0.6 1,152,518 + A4249_RS05625 0.22 -0.1 1,152,595 + A4249_RS05625 0.30 -0.3 1,152,596 - A4249_RS05625 0.30 -0.8 1,152,596 - A4249_RS05625 0.30 -0.9 1,152,633 + A4249_RS05625 0.34 -0.8 1,152,633 + A4249_RS05625 0.34 -0.6 1,152,633 + A4249_RS05625 0.34 -0.7 1,152,633 + A4249_RS05625 0.34 -0.8 1,152,633 + A4249_RS05625 0.34 -0.4 1,152,633 + A4249_RS05625 0.34 -0.4 1,152,633 + A4249_RS05625 0.34 -0.8 1,152,633 + A4249_RS05625 0.34 -0.3 1,152,633 + A4249_RS05625 0.34 -0.2 1,152,654 + A4249_RS05625 0.36 -0.5 1,152,654 + A4249_RS05625 0.36 -0.5 1,152,654 + A4249_RS05625 0.36 -0.5 1,152,654 + A4249_RS05625 0.36 -0.3 1,152,703 + A4249_RS05625 0.41 -0.9 1,152,703 + A4249_RS05625 0.41 -0.7 1,152,703 + A4249_RS05625 0.41 -0.8 1,152,759 + A4249_RS05625 0.47 -0.1 1,152,848 + A4249_RS05625 0.56 -0.3 1,152,848 + A4249_RS05625 0.56 -0.9 1,152,849 - A4249_RS05625 0.56 +1.3 1,152,939 + A4249_RS05625 0.65 -0.5 1,152,939 + A4249_RS05625 0.65 +0.1 1,152,939 + A4249_RS05625 0.65 -0.4 1,152,972 + A4249_RS05625 0.68 +0.0 1,152,972 + A4249_RS05625 0.68 +0.7 1,152,972 + A4249_RS05625 0.68 +0.5 1,152,972 + A4249_RS05625 0.68 -1.0 1,153,122 + A4249_RS05625 0.83 -1.2 1,153,122 + A4249_RS05625 0.83 -1.5 1,153,161 + A4249_RS05625 0.87 -0.2 1,153,161 + A4249_RS05625 0.87 -1.0 1,153,161 + A4249_RS05625 0.87 +2.3 1,153,161 + A4249_RS05625 0.87 +0.0 1,153,246 - +1.8
Or see this region's nucleotide sequence